CN189178

Overview
NameCN189178
Unique NameCN189178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189178_ssr18 microsatellite CN189178_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_TRASC (Alpha-enolase OS=Trachemys scripta PE=2 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 1.382e-49
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ TS G + RAAVPSGASTGIYEALELRD     +LGKGVSKAV +VN  I PAL  K+    EQ  ID  M++ +DG+ N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIFAREIFDSRGNPTVEVDLYTSKG-LFRAAVPSGASTGIYEALELRDNDKTRFLGKGVSKAVGHVNKTIAPALISKNINVVEQEKIDKLMLE-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_MOUSE (Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 2.358e-49
Identity = 108/171 (63.16%), Postives = 130/171 (76.02%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     ++GKGVS+AV ++N  I PAL  K  +  EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILRIHAREIFDSRGNPTVEVDLYTAKG-LFRAAVPSGASTGIYEALELRDNDKTRFMGKGVSQAVEHINKTIAPALVSKKVNVVEQEKIDKLMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAVEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_ANAPL (Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 2.358e-49
Identity = 109/171 (63.74%), Postives = 129/171 (75.44%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPT--EQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+IFDSRGNPTVEVD+ T+ G + RAAVPSGASTGIYEALELRD     Y+GKGVSKAV ++N  I PAL  K+    EQ  ID  M+  +DG+ N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSILKIHAREIFDSRGNPTVEVDLYTNKG-LFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHINKTIAPALISKNVNVVEQDKIDKLMLD-MDGSEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_XENLA (Alpha-enolase OS=Xenopus laevis GN=eno1 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 3.080e-49
Identity = 108/171 (63.16%), Postives = 129/171 (75.44%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  ++AR+IFDSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALELRD     YLGKGV +AV  VN  +GPAL  ++    EQ  ID  M++ +DGT N     K K GANA+L VSLAVCKAGA  K +PLY+HIA+L+GN  ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSIKNIRAREIFDSRGNPTVEVDLYTCKG-LFRAAVPSGASTGIYEALELRDNDKTRYLGKGVGRAVKYVNEFLGPALCTQNLNVVEQEKIDKLMIE-MDGTEN-----KSKFGANALLGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_NEOFR (Enolase OS=Neocallimastix frontalis PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.253e-49
Identity = 111/172 (64.53%), Postives = 132/172 (76.74%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDG-GSDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            + IT V ARQIFDSRGNPTVEV+VTT  G + RAAVPSGASTG++EALELRDG  +DY+GKGV KAV NVN  I PAL  A  D   Q A+D+++++ LDGT N     K KLGANAIL VSLAV +AGA  K +PLY+H+ EL+GNK   +LPVP+ NV+NGGSHAGNKLA
Sbjct:    1 MAITKVHARQIFDSRGNPTVEVEVTTDKG-LFRAAVPSGASTGVHEALELRDGIKADYVGKGVLKAVENVNKTIAPALVAANLDVKNQKAVDDFLLK-LDGTPN-----KSKLGANAILGVSLAVARAGAADKGVPLYQHLGELAGNKGPWILPVPSMNVLNGGSHAGNKLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_MASBA (Enolase OS=Mastigamoeba balamuthi GN=ENOL PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.861e-49
Identity = 108/168 (64.29%), Postives = 127/168 (75.60%), Query Frame = 3
Query:   75 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            TI +V AR+I DSRGNPTVEVD+TT  G + R+AVPSGASTGIYEA ELRDG  S YLGKGV KAV NVN I+ P L G D T+Q  ID  M+Q +DGT N     K  LGANAIL  S++VC+A A  + +PLY++IAELSGNK+ +LP+P FNVINGG HAGNKLA
Sbjct:    3 TIKSVFAREILDSRGNPTVEVDLTTEKG-LFRSAVPSGASTGIYEACELRDGDKSRYLGKGVLKAVENVNKILAPKLIGLDVTKQGEIDRLMLQ-IDGTEN-----KTHLGANAILGCSMSVCRAAAAFRGLPLYRYIAELSGNKSPMLPLPCFNVINGGEHAGNKLA 163          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOG_CHICK (Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.861e-49
Identity = 106/171 (61.99%), Postives = 129/171 (75.44%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            + +  + AR+I DSRGNPTVEVD+ T  G + RAAVPSGASTGIYEALELRD   S +LGKGV +AV ++N+ + PA+ G      +Q  IDN M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN +L+LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MAVERIHAREILDSRGNPTVEVDLYTHKG-MFRAAVPSGASTGIYEALELRDNDKSRFLGKGVLQAVDHINSTVAPAIVGSGLSVVDQEKIDNLMLE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKDVPLYRHIADLAGNSDLILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_CHICK (Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 6.861e-49
Identity = 109/171 (63.74%), Postives = 127/171 (74.27%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  + AR+I DSRG PTVEVD+ T+ GH  RAAVPSGASTGI+EALE RDG    +LGKGV KAV ++N  IGPAL  K     EQ  ID  M++ +DGT N     K K GANAIL VSLAVCKAGA  K +PLY+HIA+L+GN  L+LPVPAFNVINGGSHAGNKLA
Sbjct:    1 MSIQKIHAREILDSRGEPTVEVDLHTAKGHF-RAAVPSGASTGIHEALEPRDGDKKRFLGKGVLKAVEHINKTIGPALIEKKISVVEQEKIDKVMIE-MDGTEN-----KSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNTELILPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOA_DICDI (Enolase A OS=Dictyostelium discoideum GN=enoA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 6.861e-49
Identity = 111/170 (65.29%), Postives = 133/170 (78.24%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDV-TTSDGHVA--RAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            I ++KAR+I +SRGNPTVEVD+ T  DG V+  RAAVPSGASTGIYEA+ELRDG  S YLGKGV KA+ N+  +I PA+ GK  ++Q AID  M+  LDGT N     K KLGANAILAVSLAVC+AGA  + +PLYK+I+E++G K + LPVPAFNVINGGSHAGNKLA
Sbjct:    4 IKSIKAREILNSRGNPTVEVDLYTEKDGVVSSFRAAVPSGASTGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMID-LDGTPN-----KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTK-MRLPVPAFNVINGGSHAGNKLA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_CAEEL (Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 2.607e-48
Identity = 113/169 (66.86%), Postives = 128/169 (75.74%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            IT + ARQI+DSRGNPTVEVD+ T  G V RAAVPSGASTG++EALELRDG    +LGKGV KAVSN+N  I PAL  K  D T Q  ID++M+  LDG+ N     K  LGANAIL VSLAV KAGA  K +PLYK+IAEL+G   +VLPVPAFNVINGGSHAGNKLA
Sbjct:    3 ITKIHARQIYDSRGNPTVEVDLFTEKG-VFRAAVPSGASTGVHEALELRDGDKAVHLGKGVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMA-LDGSEN-----KGNLGANAILGVSLAVAKAGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLA 164          
The following BLAST results are available for this feature:
BLAST of CN189178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENOA_TRASC1.382e-4964.91Alpha-enolase OS=Trachemys scripta PE=2 SV=3[more]
ENOA_MOUSE2.358e-4963.16Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3[more]
ENOA_ANAPL2.358e-4963.74Alpha-enolase OS=Anas platyrhynchos GN=ENO1 PE=2 S... [more]
ENOA_XENLA3.080e-4963.16Alpha-enolase OS=Xenopus laevis GN=eno1 PE=2 SV=2[more]
ENO_NEOFR5.253e-4964.53Enolase OS=Neocallimastix frontalis PE=3 SV=1[more]
ENO_MASBA6.861e-4964.29Enolase OS=Mastigamoeba balamuthi GN=ENOL PE=2 SV=... [more]
ENOG_CHICK6.861e-4961.99Gamma-enolase OS=Gallus gallus GN=ENO2 PE=2 SV=1[more]
ENOB_CHICK6.861e-4963.74Beta-enolase OS=Gallus gallus GN=ENO3 PE=1 SV=3[more]
ENOA_DICDI6.861e-4965.29Enolase A OS=Dictyostelium discoideum GN=enoA PE=3... [more]
ENO_CAEEL2.607e-4866.86Enolase OS=Caenorhabditis elegans GN=enol-1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189178 ID=CN189178; Name=CN189178; organism=Citrus sinensis; type=EST; length=576bp
CTGTTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTGAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTA
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