CN189178

Overview
NameCN189178
Unique NameCN189178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189178_ssr18 microsatellite CN189178_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_SCHJA (Enolase OS=Schistosoma japonicum GN=ENO PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.808e-48
Identity = 108/171 (63.16%), Postives = 131/171 (76.61%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            + I A+ ARQIFDSRGNPTVEVD+ T+ G + RAAVPSGASTG++EALELRD  S  Y+ KGV  AVSNVN II PAL  K    T Q+ +D +M++ LDG  N     K  LGANAIL VSLAVCKAGA    +PLY++IA+L+G+K++++PVPAFNVINGGSHAGNKLA
Sbjct:    1 MAIIAIHARQIFDSRGNPTVEVDLKTAKG-LFRAAVPSGASTGVHEALELRDTNSKAYMCKGVLTAVSNVNNIIAPALLKKQIPVTNQSEVDQFMIE-LDGKEN-----KGNLGANAILGVSLAVCKAGAAELNLPLYRYIAKLAGHKDVIMPVPAFNVINGGSHAGNKLA 164          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO1_ENTHI (Enolase 1 OS=Entamoeba histolytica GN=ENL-1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.095e-46
Identity = 99/169 (58.58%), Postives = 126/169 (74.56%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            ++I  V AR+I DSRGNPT+EV++TT  G + R+ VPSGASTG++EA+ELRDG    Y GKGV KAV NVN IIGPAL GK+   Q  +D  M++ LDGT N     K KLGANAIL  S+++C+A A  K +PLYK++AEL+G+K + +PVP FNVINGG+HAGN LA
Sbjct:    1 MSIQKVHAREILDSRGNPTIEVEITTGKG-MFRSCVPSGASTGVHEAVELRDGDKKRYGGKGVLKAVENVNTIIGPALLGKNVLNQAELDEMMIK-LDGTNN-----KGKLGANAILGCSMSICRAAAAEKGLPLYKYLAELTGHKEMTMPVPCFNVINGGAHAGNALA 162          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_TUBBO (Enolase OS=Tuber borchii GN=eno-1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.524e-45
Identity = 103/170 (60.59%), Postives = 123/170 (72.35%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRD-GGSDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            IT + AR ++DSRGNPTVEVD+TT+D  + RA VPSGASTG +EA+ELRD   + + GKGV KAV NVN II PAL  +  D  +Q  ID +++  LDGT N     K KLGANAIL VSLAV KAGA  KK+PLY H+A+L+G K   VLPVP  NVINGGSHAG +LA
Sbjct:    2 ITKIHARSVYDSRGNPTVEVDLTTTDTGLHRAIVPSGASTGQHEAIELRDKDKTKWAGKGVLKAVENVNTIIAPALIKEKFDVKDQATIDKFLI-DLDGTPN-----KAKLGANAILGVSLAVAKAGAAAKKVPLYAHVADLAGTKKPFVLPVPFMNVINGGSHAGGRLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_HOMGA (Enolase OS=Homarus gammarus PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.524e-45
Identity = 106/170 (62.35%), Postives = 123/170 (72.35%), Query Frame = 3
Query:   75 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            +IT V AR IFDSRGNPTVEVD+ TS G + RAAVPSGASTG++EALE+RDG  S Y GK V  AV NVN +I P +  +G   T+Q   D +M + LDGT N     K  LGANAIL VSLA+CKAGA    IPLY+HIA L+    ++LPVPAFNVINGGSHAGNKLA
Sbjct:    1 SITKVFARTIFDSRGNPTVEVDLYTSKG-LFRAAVPSGASTGVHEALEMRDGDKSKYHGKSVFNAVKNVNDVIVPEIIKSGLKVTQQKECDEFMCK-LDGTEN-----KSSLGANAILGVSLAICKAGAAELGIPLYRHIANLANYDEVILPVPAFNVINGGSHAGNKLA 163          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO11_SCHPO (Enolase 1-1 OS=Schizosaccharomyces pombe GN=eno101 PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.602e-45
Identity = 106/172 (61.63%), Postives = 128/172 (74.42%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            + I  V ARQI+DSRGNPTVEVD+TT  G + RA VPSGASTGI+EALE+RDG  + + GKGV KAV NVN II PA+  A  D T+Q A D ++++ LDGT N     K KLGANAIL VS+A+C+AGA  KK+PL+K+IAE  G K   VLPVP+FNV+NGGSHAG  LA
Sbjct:    1 MAIQKVFARQIYDSRGNPTVEVDLTTETG-IHRAIVPSGASTGIWEALEMRDGDKTKWGGKGVLKAVGNVNNIIAPAVVKANLDVTDQKAADEFLLK-LDGTEN-----KSKLGANAILGVSMAICRAGAAQKKLPLWKYIAENFGTKGPYVLPVPSFNVLNGGSHAGGDLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_ASHGO (Enolase OS=Ashbya gossypii GN=ENO PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.339e-44
Identity = 105/173 (60.69%), Postives = 127/173 (73.41%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLA 575
            + I+ V AR ++DSRGNPTVEV+VTT +G   R+ VPSGASTG++EALELRDG  S +LGKGV+KAVSNVN II PAL  A  D  +Q A+D  M+  LDGT N     K KLGANAIL VS+AV KA A  KK+PLY+H+A+L+G+     VLPVP  NV+NGGSHAG  LA
Sbjct:    1 MAISKVYARSVYDSRGNPTVEVEVTTENG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVTKAVSNVNDIIAPALLSANVDVKDQKAVDALMLT-LDGTPN-----KSKLGANAILGVSMAVAKAAAAEKKVPLYQHLADLAGSSTTPFVLPVPFLNVLNGGSHAGGALA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_CRYPA (Enolase OS=Cryphonectria parasitica GN=ENO1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.749e-44
Identity = 102/170 (60.00%), Postives = 125/170 (73.53%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN-LVLPVPAFNVINGGSHAGNKLA 575
            I+ + AR ++DSRGNPTVEVD+ T  G + RA VPSGASTG +EA ELRDG  S +LGKGV KAV NVN ++GP L  AG D  +QTA+D ++++ LDGT N     K KLGANAIL VSLAV KAGA  K +PLY H+++L+G K   VLPVP  NV+NGGSHAG +LA
Sbjct:    3 ISKIHARYVYDSRGNPTVEVDLVTETG-LHRAIVPSGASTGQHEACELRDGDKSKWLGKGVLKAVENVNTVLGPELIKAGLDVKDQTAVDEFLIK-LDGTAN-----KTKLGANAILGVSLAVAKAGAAEKGVPLYAHVSDLAGTKKPYVLPVPFQNVLNGGSHAGGRLA 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO2_DEBHA (Enolase 2 OS=Debaryomyces hansenii GN=ENO2 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.284e-44
Identity = 102/173 (58.96%), Postives = 128/173 (73.99%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK--NLVLPVPAFNVINGGSHAGNKLA 575
            + +T + AR ++DSRGNPTVEVD+TT  G + R+ VPSGASTGI+EALELRDG  S +LGKGV+KAV+NVN +I PA   A  D T Q+A+D+++  +LDGT N     K KLGANAIL VSLA  KA A  K +PLY+H+A++SG+K    VLPVP  NV+NGGSHAG  LA
Sbjct:    1 MAVTKLFARYVYDSRGNPTVEVDLTTDKG-LFRSIVPSGASTGIHEALELRDGDKSKWLGKGVTKAVANVNELIAPAFVKANLDVTNQSAVDDFL-NKLDGTPN-----KSKLGANAILGVSLATAKAAAAEKNVPLYQHLADISGSKQDKFVLPVPFQNVLNGGSHAGGALA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENOB_DICDI (Enolase B OS=Dictyostelium discoideum GN=enoB PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.896e-44
Identity = 96/168 (57.14%), Postives = 124/168 (73.81%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            ++I ++KAR+I DSRGNPT+EV+V TS+G  + A VPSGASTGI+EA ELRDG  S Y G GV  A+ NVN +I P L G     Q AID+ M++ LDGT N     K KLG+NAI+ VS+AV +A A +K +PLY++I++L+GN N+ LPVP FNVINGG HAGN+L
Sbjct:    1 MSIESIKAREILDSRGNPTLEVEVWTSEGMFS-AKVPSGASTGIHEAFELRDGDKSRYFGYGVLNAIVNVNNLISPTLKGMRVDNQKAIDDKMIE-LDGTKN-----KSKLGSNAIVGVSMAVARAAASIKGVPLYRYISQLAGNSNIRLPVPCFNVINGGKHAGNRL 161          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO1_CANGA (Enolase 1 OS=Candida glabrata GN=ENO1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 6.645e-44
Identity = 105/173 (60.69%), Postives = 125/173 (72.25%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGK--DPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLA 575
            +++T V AR ++DSRGNPTVEV+V T DG + RA VPSGASTG +EALELRDG  S + GKGV+KAVSNVN IIGP L     D  +Q AID +M++ LDGT N     K KLGANAIL VSLAV +AGA  K +PLY+HIAEL+  K    V+P P FNV+NGG HAG  LA
Sbjct:    1 MSVTKVHARTVYDSRGNPTVEVEVYTKDG-MFRAIVPSGASTGSHEALELRDGDKSKWEGKGVTKAVSNVNDIIGPKLIESKLDVKDQKAIDEFMIK-LDGTKN-----KSKLGANAILGVSLAVARAGAAAKGVPLYQHIAELADMKKEPYVIPCPFFNVLNGGVHAGGNLA 166          
The following BLAST results are available for this feature:
BLAST of CN189178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_SCHJA5.808e-4863.16Enolase OS=Schistosoma japonicum GN=ENO PE=2 SV=1[more]
ENO1_ENTHI1.095e-4658.58Enolase 1 OS=Entamoeba histolytica GN=ENL-1 PE=2 S... [more]
ENO_TUBBO3.524e-4560.59Enolase OS=Tuber borchii GN=eno-1 PE=1 SV=1[more]
ENO_HOMGA3.524e-4562.35Enolase OS=Homarus gammarus PE=1 SV=1[more]
ENO11_SCHPO4.602e-4561.63Enolase 1-1 OS=Schizosaccharomyces pombe GN=eno101... [more]
ENO_ASHGO1.339e-4460.69Enolase OS=Ashbya gossypii GN=ENO PE=3 SV=1[more]
ENO_CRYPA1.749e-4460.00Enolase OS=Cryphonectria parasitica GN=ENO1 PE=3 S... [more]
ENO2_DEBHA2.284e-4458.96Enolase 2 OS=Debaryomyces hansenii GN=ENO2 PE=3 SV... [more]
ENOB_DICDI3.896e-4457.14Enolase B OS=Dictyostelium discoideum GN=enoB PE=3... [more]
ENO1_CANGA6.645e-4460.69Enolase 1 OS=Candida glabrata GN=ENO1 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189178 ID=CN189178; Name=CN189178; organism=Citrus sinensis; type=EST; length=576bp
CTGTTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTGAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTA
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