CN189178

Overview
NameCN189178
Unique NameCN189178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189178_ssr18 microsatellite CN189178_ssr18:18..27. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13557 contig Csv1_Contig13557:19..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ERR3_YEAST (Enolase-related protein 3 OS=Saccharomyces cerevisiae GN=ERR3 PE=1 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 8.679e-44
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLA 575
            ++IT V AR ++DSRGNPTVEV++TT +G + RA VPSGASTGI+EA+ELRDG  S+++GKGV+KAVSNVN+IIGPAL   D   T Q  ID  M+  LDGT N     K +LGANAIL VSL V +A A  K I LYK+IAEL+  +    V+PVP FNV+NGG+HAG  LA
Sbjct:    1 MSITKVHARTVYDSRGNPTVEVEITTENG-LFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSDLCVTNQKGIDELMIS-LDGTSN-----KSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_ACIAD (Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.934e-43
Identity = 98/166 (59.04%), Postives = 116/166 (69.88%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            I  ++AR+I DSRGNPT+E DV  + G V RA  PSGASTG  EALELRDG  + YLGKGV  AV+NVN II  AL GK   EQ  IDN M++ LDGT N     K+KLGANA LAVSLA  +A A  KKIPL+++IA+L G   L +PVP  N+INGGSHA N +
Sbjct:    6 IVDIRAREILDSRGNPTIEADVILASGVVGRACAPSGASTGSREALELRDGDKARYLGKGVKTAVNNVNTIIRDALVGKSVFEQKDIDNTMIE-LDGTEN-----KEKLGANATLAVSLAAARAAADEKKIPLFQYIADLRGQTILTMPVPMMNIINGGSHADNNV 165          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ERR1_YEAST (Enolase-related protein 1/2 OS=Saccharomyces cerevisiae GN=ERR1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.525e-43
Identity = 102/173 (58.96%), Postives = 127/173 (73.41%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKD--PTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLA 575
            ++IT V AR ++DSRGNPTVEV++TT +G + RA VPSGASTGI+EA+ELRDG  S+++GKGV+KAVSNVN+IIGPAL   +   T Q  ID  M+  LDGT N     K +LGANAIL VSL V +A A  K I LYK+IAEL+  +    V+PVP FNV+NGG+HAG  LA
Sbjct:    1 MSITKVHARTVYDSRGNPTVEVEITTENG-LFRAIVPSGASTGIHEAVELRDGNKSEWMGKGVTKAVSNVNSIIGPALIKSELCVTNQKGIDELMIS-LDGTSN-----KSRLGANAILGVSLCVARAAAAQKGITLYKYIAELADARQDPFVIPVPFFNVLNGGAHAGGSLA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_KLULA (Enolase OS=Kluyveromyces lactis GN=ENO PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.525e-43
Identity = 103/171 (60.23%), Postives = 122/171 (71.35%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKN--LVLPVPAFNVINGGSHAGNKLA 575
            I+ V AR ++DSRGNPTVEV++TT  G   R+ VPSGASTG++EALELRDG  S +LGKGV  AVSNVN II PAL  A  D T Q  +D+ ++  LDGT N     K KLGANAIL VSLA  KAGA  K +PLY+H+A+L+G K    VLPVP  NV+NGGSHAG  LA
Sbjct:    3 ISKVYARSVYDSRGNPTVEVELTTEKG-TFRSIVPSGASTGVHEALELRDGDKSKWLGKGVLTAVSNVNNIIAPALVKANVDVTNQQQVDDLLLS-LDGTAN-----KSKLGANAILGVSLAASKAGAAAKNVPLYQHLADLAGAKTQPFVLPVPFLNVLNGGSHAGGALA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO1_DEBHA (Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.525e-43
Identity = 103/173 (59.54%), Postives = 127/173 (73.41%), Query Frame = 3
Query:   72 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPAL--AGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK--NLVLPVPAFNVINGGSHAGNKLA 575
            +TI+ V +R ++DSRGNPTVEVDVTT +G + RA VPSGASTGI EA+ELRDG  S + GKGV+KAV NVN  I P L  +G D   Q  ID+++++ LDGT N     K+ LGANAIL VSLAV KAGA  K++PLY+HIA++S +K    VLPVP  NV+NGGSHAG  LA
Sbjct:    1 MTISKVHSRYVYDSRGNPTVEVDVTTENG-LFRAIVPSGASTGINEAMELRDGDKSKWQGKGVTKAVDNVNKTIAPHLIKSGLDEKNQEEIDSFLLK-LDGTPN-----KRSLGANAILGVSLAVAKAGAAAKQVPLYRHIADISKSKQDKYVLPVPFQNVLNGGSHAGGSLA 166          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_METTP (Enolase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=eno PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.307e-43
Identity = 98/170 (57.65%), Postives = 117/170 (68.82%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLA 575
            M++ I  + AR+I DSRGNPTVEVDV T  G   RAAVPSGASTG YEALELRDGG  Y GKGV KAV NVN +IGP L G D  +Q  +D  M+ ++DGT N     K  LGANAIL VSLAV KA A    +PLY+++  +S  +   LPVP+ NV+NGG HAGN L+
Sbjct:    1 MSLEIEKIHAREILDSRGNPTVEVDVWTCCGF-GRAAVPSGASTGTYEALELRDGGDRYDGKGVLKAVRNVNEVIGPKLIGMDVIDQRGVDQIMI-EMDGTPN-----KSNLGANAILGVSLAVAKAAASSLGMPLYRYLGGVSATR---LPVPSLNVLNGGKHAGNDLS 160          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_PSYWF (Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=eno PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.347e-43
Identity = 94/167 (56.29%), Postives = 118/167 (70.66%), Query Frame = 3
Query:   69 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGN 566
            A+ I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S YLGKGV+KAV+NVN+ I  AL   D T+Q  IDN ++ +LDGT N     K  LGANA+LAVSLA  KA A  + +PL+++IA L G  +L +PVP  N++NGG HA N
Sbjct:    9 AVEIQDIRAREILDSRGNPTIEADVILADGSMGRAAAPSGASTGSREALELRDGDKSRYLGKGVTKAVANVNSQIRSALLESDATDQQGIDNILI-ELDGTAN-----KDHLGANAMLAVSLATAKAAAISQNLPLHQYIANLRGQTSLTMPVPMMNILNGGEHADN 169          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_ANATD (Enolase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=eno PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.347e-43
Identity = 96/171 (56.14%), Postives = 119/171 (69.59%), Query Frame = 3
Query:   63 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKL 572
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTGI+EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N +
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGIFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDKLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSV 163          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO_PSYCK (Enolase OS=Psychrobacter cryohalolentis (strain K5) GN=eno PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.253e-42
Identity = 96/164 (58.54%), Postives = 116/164 (70.73%), Query Frame = 3
Query:   78 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGN 566
            I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S Y+GKGV KAV+NVN+ I  AL  KD T Q AID+ M+  LDGT N     K  LGANAILAVSLAV KA A  + +PL+++IA+L    +L +PVP  N+INGG HA N
Sbjct:   12 IKDIRAREILDSRGNPTIEADVILADGTIGRAAAPSGASTGSREALELRDGDQSRYMGKGVKKAVANVNSQIRSALMDKDVTAQQAIDDAMI-ALDGTEN-----KDNLGANAILAVSLAVAKAAAKSQSLPLHQYIADLRNQTSLTMPVPMMNIINGGEHADN 169          
BLAST of CN189178 vs. ExPASy Swiss-Prot
Match: ENO2_LACLA (Enolase 2 OS=Lactococcus lactis subsp. lactis GN=eno2 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.253e-42
Identity = 96/165 (58.18%), Postives = 118/165 (71.52%), Query Frame = 3
Query:   66 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHA 560
            M +TI  + AR+IFDSRGNPTVEVDV  +DG + RAAVPSGASTG  EA+ELRDGG    GKGVSKAV+NVN  I  AL G+ P  Q  +D+ M+ +LDGT N     K +LGANAIL VS+A+ +A A+ +KIPLY+++    G  +L LP P FNVINGG HA
Sbjct:    1 MTVTIENIHAREIFDSRGNPTVEVDVRLTDGTLGRAAVPSGASTGDREAVELRDGGDRLQGKGVSKAVANVNGEIYEALKGQSPFNQAKLDHLMI-ELDGTKN-----KSRLGANAILGVSMAISRAAANSEKIPLYRYL----GGVDLELPQPFFNVINGGVHA 155          
The following BLAST results are available for this feature:
BLAST of CN189178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ERR3_YEAST8.679e-4459.54Enolase-related protein 3 OS=Saccharomyces cerevis... [more]
ENO_ACIAD1.934e-4359.04Enolase OS=Acinetobacter sp. (strain ADP1) GN=eno ... [more]
ERR1_YEAST2.525e-4358.96Enolase-related protein 1/2 OS=Saccharomyces cerev... [more]
ENO_KLULA2.525e-4360.23Enolase OS=Kluyveromyces lactis GN=ENO PE=3 SV=1[more]
ENO1_DEBHA2.525e-4359.54Enolase 1 OS=Debaryomyces hansenii GN=ENO1 PE=3 SV... [more]
ENO_METTP4.307e-4357.65Enolase OS=Methanosaeta thermophila (strain DSM 61... [more]
ENO_PSYWF7.347e-4356.29Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=en... [more]
ENO_ANATD7.347e-4356.14Enolase OS=Anaerocellum thermophilum (strain DSM 6... [more]
ENO_PSYCK1.253e-4258.54Enolase OS=Psychrobacter cryohalolentis (strain K5... [more]
ENO2_LACLA1.253e-4258.18Enolase 2 OS=Lactococcus lactis subsp. lactis GN=e... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189178 ID=CN189178; Name=CN189178; organism=Citrus sinensis; type=EST; length=576bp
CTGTTCGCACTCACAGACTCTCTCTCTCGTTCTAGATCTTTCTTCGGTTT
TCCAGTTTTCAGAAAATGGCAATAACCATCACTGCCGTCAAAGCCAGGCA
GATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTCGACGTGACAACAT
CAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGGTGCATCCACCGGA
ATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTGATTACCTAGGCAA
GGGTGTATCGAAAGCTGTTAGCAATGTCAACGCCATCATTGGCCCTGCAC
TCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGACAACTATATGGTA
CAACAACTTGATGGAACTGTGAATGAGTGGGGTTGGTGCAAACAGAAGCT
TGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTCTGCAAGGCTGGTG
CACATGTCAAGAAGATTCCTCTTTACAAGCATATTGCCGAACTCTCTGGT
AACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATGTCATTAATGGTGG
ATCACATGCTGGAAACAAACTTGCTA
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