CN189172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189172 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.813e-28 Identity = 80/219 (36.53%), Postives = 109/219 (49.77%), Query Frame = 1 Query: 1 EELTHVYTFILRPDATYSILIDNVEKQSGSLYSDWD----LLPPKTIKDPDAKKPEDWDDKEYIPDP-------------------EDKKPEGY-DDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYK-----GPWKPKKIKNPNYKGKWKAPMIDNPDFK--------DDPDLYVY--PN---LKYVGIELWQVKSGTMFDNVLVSDDPEYANK 531 ++LTHVYT +++PD ILID EK+ + S D L+P KTI DPD KKPEDWD++ IPDP E +KPEG+ DD P+EI P I NP+ + G W+ +NP YKGKW AP+IDNP +K +PD + PN + +GIE + G +FDN+L++ D + A K Sbjct: 181 DKLTHVYTAVIKPDNELVILIDGEEKKKANFLSSEDFEPALIPTKTIPDPDDKKPEDWDERAKIPDPEATKPDDWDEDAPMEILDEEAEKPEGWLDDEPEEIDDPEAVKPEDWDDEEDGEWEAPQIENPKCESAPGCGEWRRPLKRNPAYKGKWHAPLIDNPAYKGIWKPREIPNPDYFELEKPNFEPIAAIGIEDLDQQDGILFDNILIASDEKTAAK 399
BLAST of CN189172 vs. ExPASy Swiss-Prot
Match: CLGN_BOVIN (Calmegin OS=Bos taurus GN=CLGN PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.162e-27 Identity = 70/220 (31.82%), Postives = 102/220 (46.36%), Query Frame = 1 Query: 10 THVYTFILRPDATYSILIDNVEKQSGSLYSDW--DLLPPKTIKDPDAKKPEDWDDKEYIPD-----PED--------------KKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXX------------------PTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWG 552 TH+YT ++ PD T+ +LID + GSL D + PPK I+DP +KP+DWD++ IPD PED KP+G+ D E P I NP+YKG W+P I NPNY+G W I NPD+ +D ++ + + +G+ELW + S FDN ++ + E A++ A + WG Sbjct: 222 THLYTLVMNPDDTFEVLIDQIVVNKGSLLEDVVPPINPPKEIEDPTDEKPDDWDERAKIPDASAVKPEDWDESEPPQIVDSSAVKPDGWLDNEPEFIPDPNAEKPFDWNEDMDGEWEAPHISNPACRIGCGEWSPPMIDNPKYKGIWRPPMIDNPNYQGIWSPRKIPNPDYFEDNHPFLLTSFRALGLELWSMTSDIYFDNFIICSEKEVADRWAADGWG 441
BLAST of CN189172 vs. ExPASy Swiss-Prot
Match: CALX_SCHPO (Calnexin homolog OS=Schizosaccharomyces pombe GN=cal1 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.192e-26 Identity = 75/227 (33.04%), Postives = 99/227 (43.61%), Query Frame = 1 Query: 7 LTHVYTFILRPDATYSILIDNVEKQSGSLY--------------------------------------SDWDLLPPKTIKDPDAKKPEDW--DDKEYIPDPEDKKPEGYDD------IPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETW 549 +T++YT I++PD T+ + I+ + GSL+ DWD P+ I DPDA KPEDW D+ YIPDPE +KPE +DD IP EI P I NP Y+GPW P I NP + G+W I NPD+ DD + L VG ELW ++ F N+ V E A +L ET+ Sbjct: 200 ITNLYTLIVKPDQTFEVRINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVKPDDWDEDAPRMIPDPDAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAGCGEWKP-----PMIRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQPNIRFSNIYVGHSIEDAERLGNETF 421
BLAST of CN189172 vs. ExPASy Swiss-Prot
Match: CALX_CAEEL (Calnexin homolog OS=Caenorhabditis elegans GN=cnx-1 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 64/221 (28.96%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 10 THVYTFILRPDATYSILID--------------------------------------NVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKE--YIPDPEDKKPEGYD-DIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETW 549 TH++T +++P YS+ +D N+E +S DWD P+++ D A KP DW+++E I DPE KKP+ +D D+ PTI NP+YKG W KI NP +KGKW A +IDNP++ + + VGIE+W + +FDN+L++ E ++ +A++T+ Sbjct: 227 THLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTPPKQIFDETDLKPVDWDERENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAKKPQDWDEDMDGSWEAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLIDNPNYFEPKPFAGLAPITAVGIEMWTMSENILFDNILITSSEEDSSDVAKQTF 447
BLAST of CN189172 vs. ExPASy Swiss-Prot
Match: CALR3_HUMAN (Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22 Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 1 Query: 10 THVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 555 TH+YT ILRPD +Y + ID +SGS+ DW+L K K+ + +DW+ + D K + ++ K P + P Y+ KP+ I +K W + N D+ DL + N+ +G+ELWQV+SGT+FDN L++DD EYA+ + TWG+ Sbjct: 169 THLYTLILRPDLSYDVKIDGQSIESGSIEYDWNLTSLK--KETSPAESKDWEQTK------DNKAQDWE---KHFLDASTSKQSDWNGDLDGDWPAPMLQKPPYQDGLKPEGI----HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEYADNFGKATWGE 335
BLAST of CN189172 vs. ExPASy Swiss-Prot
Match: CALR3_BOVIN (Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.426e-19 Identity = 60/185 (32.43%), Postives = 85/185 (45.95%), Query Frame = 1 Query: 1 EELTHVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPDAKKPEDWDDKEYIPDPEDKKPEGYDDIPKEIXXXXXXXXXXXXXXXXXXXXXPTIPNPEYKGPWKPKKIKNPNYKGKWKAPMIDNPDFKDDPDLYVYPNLKYVGIELWQVKSGTMFDNVLVSDDPEYANKLAEETWGK 555 + TH+YT +LRPD TY + ID +SGS+ DW L K ++ A + E WD +DK D K + P Y+ KP+ I K W + N + + DL + N+ VG+ELWQV+SGT+FDN L++DD EYA + TWG+ Sbjct: 166 DSFTHLYTLVLRPDLTYEVKIDGQSIESGSIEYDWQLTSLKKMEKASA-EAEGWDQA-----AKDKS----QDWEKHFLDASASKPSDWKGELDGDWQAAMLQKPPYQDGLKPEGID----KDVWLHQKMKN-SYLTEYDLSEFENIGAVGLELWQVRSGTIFDNFLITDDEEYAENFGKATWGE 335 The following BLAST results are available for this feature:
BLAST of CN189172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189172 ID=CN189172; Name=CN189172; organism=Citrus sinensis; type=EST; length=766bpback to top |