CN189169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_CHICK (S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_CAVPO (S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1_BOVIN (S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.429e-28 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = -3 Query: 197 KDDKSTE---DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 457 +DD++ E DD WD EF+KVDQ TLF+LILAANYL+IKGLLD+TC+TVA+MIKGKTPE IRKTFNIK DF +EE V +ENQW E Sbjct: 73 EDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEE 162
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK4_ARATH (SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.063e-27 Identity = 61/91 (67.03%), Postives = 70/91 (76.92%), Query Frame = -3 Query: 197 GDKKDDKSTE-DDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 466 GDK S E D+ K WD+EFVKVDQ TLFDLILAANYLNI GLLDLTC+ VAD ++GKTPE +R FNIK D+ P+EE V EN+WAFE Sbjct: 73 GDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1B_DICDI (SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium discoideum GN=fpaB-1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.747e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = -3 Query: 206 GDKKDDKSTEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQW 466 GD K D+ DD +D +F KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPE IRK FNIK DF P+EEE + +EN+W Sbjct: 69 GDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: SKP1A_DICDI (SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium discoideum GN=fpaA PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.747e-26 Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = -3 Query: 206 GDKKDDKSTEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQW 466 GD K D+ DD +D +F KVDQ TLF+LILAANYL+IK LLD+TC+TVA+MI+GKTPE IRK FNIK DF P+EEE + +EN+W Sbjct: 69 GDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVANMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEW 155
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK3_ARATH (SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.479e-25 Identity = 57/91 (62.64%), Postives = 69/91 (75.82%), Query Frame = -3 Query: 197 GDKKDDKSTED-DFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 466 GDK STE+ + KTWD +FVKVD TLFDL+ AANYLNI GLLDLTC+ VAD ++GKTP +R+ FNIK D+ P+EE V EN+WAFE Sbjct: 73 GDKDFYGSTENHELKTWDNDFVKVDHPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAFE 163
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK14_ARATH (SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.294e-25 Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = -3 Query: 197 DDFKTWDAEFVK-VDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 436 D+FKTWD EF+K DQ T+F L+LAANYLNIKGLLDL+ QTVAD IK KTPE IR+ FNI+ DF P+EE V +EN WAFE Sbjct: 69 DEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE 149
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK9_ARATH (SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.338e-25 Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 197 TEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 442 ++DD K WD EF++ D +T+FDLI AANYLNIK L DL CQTVA++IKG TPE IR+ FNI+ D P+EE + REN+WAFE Sbjct: 72 SDDDLKKWDKEFMEKDTSTIFDLIKAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAFE 153
BLAST of CN189169 vs. ExPASy Swiss-Prot
Match: ASK10_ARATH (SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 4.756e-24 Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = -3 Query: 197 TEDDFKTWDAEFVKVDQNTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEGIRKTFNIKKDFFPDEEEGVWRENQWAFE 442 +++D K WD EF++ Q+T+FDLI+AANYLNIK LLDL CQTVADMIK T E RK FNI+ D+ +EEE V RENQW FE Sbjct: 71 SDEDLKKWDKEFMEKYQSTIFDLIMAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGFE 152 The following BLAST results are available for this feature:
BLAST of CN189169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189169 ID=CN189169; Name=CN189169; organism=Citrus sinensis; type=EST; length=471bpback to top |