CN189160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_AGRT5 (Nucleoside diphosphate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndk PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.082e-25 Identity = 60/133 (45.11%), Postives = 78/133 (58.65%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF MIKPD +R L G I FE G + K + + + AE Y +PFFG L+E +TSGP + + EGE + R I+GATNPAQ A GTIR A+ G N +HGSD+ E+A +EIA WF + I Sbjct: 6 TFSMIKPDATKRNLTGAITKVFEDNGLRIVASKRVWMSKREAEGFYAVHKERPFFGELVEGMTSGPTIVQVLEGENAILKNREIMGATNPAQAAEGTIRKSFALSIGENSVHGSDAPETAAQEIAYWFAETEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SALAR (Nucleoside diphosphate kinase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25 Identity = 57/133 (42.86%), Postives = 82/133 (61.65%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF +IKP+ V + ++G I RFE GF + G +++ + A Y + KPFF L+E++TSGP+V + E E V+ R ++GATNPA GT+R D A N HGSDS+ESAQ+EIA +F +G + Sbjct: 6 TFSIIKPNAVAKNVIGSIFARFEAAGFRIVGTRMLHLTVEQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLESENAVQRHRDLLGATNPANALAGTLRADYADSFTENGTHGSDSLESAQREIAFFFGEGEV 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_PROMH (Nucleoside diphosphate kinase OS=Proteus mirabilis (strain HI4320) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF +IKP+ V++ ++G I RFE GFS+ K++ + R AE YE+ +PFF L+E++TSGP++ + EGE ++ R ++GATNP GT+R D A N +HGSDS SA +EIA +F + I Sbjct: 6 TFSIIKPNAVKKNVIGAIYNRFESAGFSIVAAKMLHLTREQAEGFYEEHKGRPFFDGLVEFMTSGPIMVQVLEGENAIQRHRDLMGATNPDNALAGTLRADYADSFTENAVHGSDSEASAAREIAYFFTENEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_CAMHC (Nucleoside diphosphate kinase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25 Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 T +IKPD V++G++G+II RFE G + K + + + A + Y + FF L++Y+TSGPVV M+ EGE V R ++GAT+P + APGTIR D A N +HGSDS E+A+ EIA +F Sbjct: 4 TLSIIKPDAVEKGVIGKIIDRFESAGLRIAAAKKIKLSKCDASQFYAIHKERSFFNDLVDYMTSGPVVVMVLEGENAVAKNRELMGATDPKKAAPGTIRADFAESIDANAVHGSDSEENAKNEIAFFF 131
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_ANAMM (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain St. Maries) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25 Identity = 57/133 (42.86%), Postives = 84/133 (63.16%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 T ++KPD V+RG++G ++ E G + ++ + AE Y ++PFF SL+ ++TSGPVV + GE VKT R ++GATNP++ APGTIRGDLA N +HGSDS+E+A+ EI +F + I Sbjct: 6 TLSILKPDVVERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_ANAMF (Nucleoside diphosphate kinase OS=Anaplasma marginale (strain Florida) GN=ndk PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.414e-25 Identity = 57/133 (42.86%), Postives = 84/133 (63.16%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 T ++KPD V+RG++G ++ E G + ++ + AE Y ++PFF SL+ ++TSGPVV + GE VKT R ++GATNP++ APGTIRGDLA N +HGSDS+E+A+ EI +F + I Sbjct: 6 TLSILKPDVVERGIIGRVLSYIEAAGLRIVAQRMCALSHEQAEAFYAVHKARPFFPSLVGFMTSGPVVVQVLVGESAVKTYRDVMGATNPSEAAPGTIRGDLAESIDANCVHGSDSLENAEWEIKFFFKEHEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_VIBHB (Nucleoside diphosphate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25 Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF ++KPD V+R L+GEI R EK G + K++ + A Y + KPFF +L E++TSGP++ + EGE + R ++G TNP + A GTIR D A+ N +HGSDS ESA +EI +FP+ I Sbjct: 6 TFSIVKPDAVERNLIGEIYHRIEKAGLRIVAAKMVHLTEEQASGFYAEHEGKPFFPALKEFMTSGPIMVQVLEGEDAIARYRELMGKTNPEEAACGTIRADYALSMRHNSVHGSDSPESAAREIEFFFPESEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SHEPA (Nucleoside diphosphate kinase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25 Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 TF +IKPD V + +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA+ A GTIR D A N HGSDSV SA++E+A +F Sbjct: 6 TFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMIHLSKEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREVAYFF 133
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SHEHH (Nucleoside diphosphate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25 Identity = 59/128 (46.09%), Postives = 80/128 (62.50%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 TF +IKPD V + +G I RFE G + K++ + + AE Y + S +PFFG+L+ ++TSGP++ EGE V R I+GATNPA+ A GTIR D A N HGSDSV SA++EIA +F Sbjct: 6 TFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREIAYFF 133
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SERP5 (Nucleoside diphosphate kinase OS=Serratia proteamaculans (strain 568) GN=ndk PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25 Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF +IKP+ V +G I RFE+ GF + K++ + R AE Y + +PFF L+E++TSGP+V + E E V+ R I+GATNP GT+R D A N +HGSD+VESAQ+EIA +F + I Sbjct: 6 TFSIIKPNAVANNDIGAIYARFERAGFKIIASKMLRLTREQAEGFYAEHKGRPFFDGLVEFMTSGPIVVQVLEAENAVQRNRDIMGATNPDNALAGTLRADYADSFTANAVHGSDAVESAQREIAYFFNESEI 138 The following BLAST results are available for this feature:
BLAST of CN189160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189160 ID=CN189160; Name=CN189160; organism=Citrus sinensis; type=EST; length=663bpback to top |