CN189160

Overview
NameCN189160
Unique NameCN189160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_BRUMB (Nucleoside diphosphate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA    GTIR   A+  G N +HGSD+ E+A +EIA WF
Sbjct:    6 TFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_BRUC2 (Nucleoside diphosphate kinase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA    GTIR   A+  G N +HGSD+ E+A +EIA WF
Sbjct:    6 TFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_BRUAB (Nucleoside diphosphate kinase OS=Brucella abortus GN=ndk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA    GTIR   A+  G N +HGSD+ E+A +EIA WF
Sbjct:    6 TFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_BRUA2 (Nucleoside diphosphate kinase OS=Brucella abortus (strain 2308) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA    GTIR   A+  G N +HGSD+ E+A +EIA WF
Sbjct:    6 TFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_BRUA1 (Nucleoside diphosphate kinase OS=Brucella abortus (strain S19) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.846e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA    GTIR   A+  G N +HGSD+ E+A +EIA WF
Sbjct:    6 TFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKTFALSIGENSVHGSDAPETAAEEIAYWF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SHEPW (Nucleoside diphosphate kinase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF +IKPD V +  +G I  RFE  G  +   K++ + +  AE  Y + S +PFFG+L+ ++TSGP++    EGE  V   R I+GATNPA+ A GTIR D A     N  HGSDSV SA++E+A +F
Sbjct:    6 TFSIIKPDAVAKNHIGAIYNRFETAGLKIIASKMVHLSQEQAEGFYAEHSERPFFGALVAFMTSGPIMVQTLEGENAVLAHREILGATNPAEAAEGTIRADFAESIDENAAHGSDSVASAEREVAYFF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_DESOH (Nucleoside diphosphate kinase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 57/128 (44.53%), Postives = 83/128 (64.84%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            T  ++KPDGV+RGL+GE++ R EK+G  +  +K++ + R  AE  Y     +PFF SL  +++SGPVV M+ EGE  +   RT++GATN    A GTIR D A    RN++HGSD+ ++A  EI  +F
Sbjct:    4 TLSIVKPDGVERGLIGEVVRRLEKEGLKIIAMKMIHMTRAQAEGFYAVHRERPFFESLTTFMSSGPVVVMVLEGEDAILRYRTLMGATNYKDAAEGTIRRDFATEIERNVVHGSDAPDTAAFEIGYFF 131
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_BRUME (Nucleoside diphosphate kinase OS=Brucella melitensis GN=ndk PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.412e-25
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            TF MIKPD  +R L G II + E+ G  +   K + + R  AE  Y     +PFFG L+E+++SGP V  + EGE  +   R ++GATNPA    GTIR   A+  G N +HGSD+ E+A +EIA WF
Sbjct:    6 TFSMIKPDATRRNLTGAIIAKLEEAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANADEGTIRKAFALSIGENSVHGSDAPETAAEEIAYWF 133
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_PHEZH (Nucleoside diphosphate kinase OS=Phenylobacterium zucineum (strain HLK1) GN=ndk PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 61/133 (45.86%), Postives = 81/133 (60.90%), Query Frame = -3 
Query:  263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661
            TF +IKPD  +R L G++    E  G  +   K + + R  AEK YE    +PFFG L+E++TS PVV  + EGE  V   R ++GATNPAQ A GTIR   A   G N +HGSDS+E+A+ EIA +F +  I
Sbjct:    5 TFSIIKPDATRRNLTGKVNAVIEDAGLRIVAQKRIRMSRAQAEKFYEVHKERPFFGELVEFMTSAPVVVQVLEGENAVARYREVMGATNPAQAADGTIRKLYAESVGENSVHGSDSLENAKIEIAQFFTEDEI 137
[Close]
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK2_PARUW (Nucleoside diphosphate kinase 2 OS=Protochlamydia amoebophila (strain UWE25) GN=ndk2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 57/128 (44.53%), Postives = 78/128 (60.94%), Query Frame = -3 
Query:  278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661
            T  +IKPD V    +GEII RFEK G  +   K+  +DR  AE  Y     +PFF  L+ ++T+GPV+ M+ EGE  +   R I+GAT+P + APGTIR D A     N +HGSD+ E+A+ EI  +F
Sbjct:    6 TLSIIKPDAVGNNHIGEIIARFEKAGLRIVAAKMKQLDRKDAEGFYAVHKGRPFFEDLVGFMTTGPVMIMVLEGENAINKNREIMGATDPKKAAPGTIRADFAQTIDENAVHGSDAAETAKTEIEYFF 133
The following BLAST results are available for this feature:
BLAST of CN189160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BRUMB1.846e-2544.53Nucleoside diphosphate kinase OS=Brucella melitens... [more]
NDK_BRUC21.846e-2544.53Nucleoside diphosphate kinase OS=Brucella canis (s... [more]
NDK_BRUAB1.846e-2544.53Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_BRUA21.846e-2544.53Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_BRUA11.846e-2544.53Nucleoside diphosphate kinase OS=Brucella abortus ... [more]
NDK_SHEPW2.412e-2545.31Nucleoside diphosphate kinase OS=Shewanella piezot... [more]
NDK_DESOH2.412e-2544.53Nucleoside diphosphate kinase OS=Desulfococcus ole... [more]
NDK_BRUME2.412e-2544.53Nucleoside diphosphate kinase OS=Brucella melitens... [more]
NDK_PHEZH3.150e-2545.86Nucleoside diphosphate kinase OS=Phenylobacterium ... [more]
NDK2_PARUW3.150e-2544.53Nucleoside diphosphate kinase 2 OS=Protochlamydia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001G16_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189160 ID=CN189160; Name=CN189160; organism=Citrus sinensis; type=EST; length=663bp
TTTTTTTTTTTTTTTTTCATAATACAGTCAACAAAAAAGCTTAAATATTG
TATATGGCAACCACAAAAATAAAAGCAGCCAACATAACCAGGATTGGTCT
CAATTTAACTCAATACTTCATAACAGTTCACCAACAAGGAGTAACCATAA
ATAAGGAAATAGGGATAGGGATAGGGATAAGTCTAACTGCAGGAACAATT
AGGCTCCTCAACCAAACATTAGTTTACTCATAAATCCAAGGGTGAAGGCT
GCTCTGCCAGTTAATAGGGCCATCAGGGAACCACAAGGCGATTTCTTTCT
GGGCACTCTCAACTGAGTCACTTCCATGGATAATATTCCTGCCCGTCACG
ATAGCCAAATCACCACGGATGGTTCCAGGAGCAAACTGCGCAGGGTTGGT
GGCTCCAATAATAGTGCGGCCAGTCTTAACAACACCTTCACCCTCCCAAA
TCATAGCAACAACAGGACCAGAGGTAATGTACTCAATCAAAGAACCAAAG
AAAGGCTTCGATGACAAATCCTCATAGTGCTTCTCAGCAAAAGGGCGGTC
CACAGTCATAAGCTTCAAACCCTTCAAAGAAAAACCCTTCTTCTCAAATC
TGATGATGATTTCACCAACAAGGCCTCTTTGGACCCCATCGGGCTTGATC
ATGATGAAAGTTT
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