CN189160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_VIBC3 (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/133 (42.11%), Postives = 79/133 (59.40%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF +IKPD V+R L+GEI R EK G + K++ + A Y + KPFF L E++TSGP++ + EGE + R ++G TNP + A GT+R D A+ N +HGSDS SA +EI +FP+ I Sbjct: 6 TFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SILST (Nucleoside diphosphate kinase OS=Silicibacter sp. (strain TM1040) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/128 (43.75%), Postives = 79/128 (61.72%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 TF +IKPD +R L G I +FE+ G + K + + + A K Y + +PF+ L E+++S PVV + EGEG + R I+GATNPA APGTIR + A G N +HGSD+ E+A +EIA +F Sbjct: 6 TFSIIKPDATRRNLTGAINAKFEEAGLRIVAQKRIHMTKAQAGKFYAVHAERPFYDELCEFMSSAPVVVQVLEGEGAIAKNREIMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETAAEEIAYFF 133
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_RICBR (Nucleoside diphosphate kinase OS=Rickettsia bellii (strain RML369-C) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF MIKPD ++R +G++ E +G + K+ T+ + AE Y++ ++PFF SL+EYITSGPVV + +G + R ++GATNPA+ GTIR D+ N IHGSDS SA++EI +F I Sbjct: 6 TFSMIKPDAIKRNKIGQVNTYLENEGLKIVAQKMTTLTKYEAECFYDEHRARPFFDSLVEYITSGPVVLQVLKGMDAITLNRKVMGATNPAEAEAGTIRKDIGESIEANSIHGSDSENSAKREIKFFFKKSEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_RICB8 (Nucleoside diphosphate kinase OS=Rickettsia bellii (strain OSU 85-389) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/133 (42.11%), Postives = 81/133 (60.90%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF MIKPD ++R +G++ E +G + K+ T+ + AE Y++ ++PFF SL+EYITSGPVV + +G + R ++GATNPA+ GTIR D+ N IHGSDS SA++EI +F I Sbjct: 6 TFSMIKPDAIKRNKIGQVNTYLENEGLKIVAQKMTTLTKYEAECFYDEHRARPFFDSLVEYITSGPVVLQVLKGMDAITLNRKVMGATNPAEAEAGTIRKDIGESIEANSIHGSDSENSAKREIKFFFKKSEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_PSYCK (Nucleoside diphosphate kinase OS=Psychrobacter cryohalolentis (strain K5) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 56/128 (43.75%), Postives = 76/128 (59.38%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 T +IKPD V +G I RFEK G + K+M +D A Y + + +PF+ L+ ++TSGPV+ + EGE + T R I+GATNP A GTIR D A N +HGSDS ESA +EI+ +F Sbjct: 6 TLSIIKPDAVAGNNIGAIYDRFEKSGLKIVAAKMMQLDDKKAGGFYAEHAERPFYNDLVSFMTSGPVLVSVLEGENAIATHRDIMGATNPKDAAEGTIRADFASSIDENAVHGSDSAESAAREISYFF 133
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_ARCB4 (Nucleoside diphosphate kinase OS=Arcobacter butzleri (strain RM4018) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 55/128 (42.97%), Postives = 80/128 (62.50%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 T +IKPD V + +VG+I+ RFE G + K + + + AE Y +++PFF L+E++ SGPVV + EGE + R ++GATNP + A GTIR D A N +HGSDS+E+A+ EIA +F Sbjct: 4 TLSIIKPDAVAKNVVGKILDRFESAGLKIAATKKLQLSQADAEAFYAVHAARPFFKDLVEFMISGPVVVSVLEGENAMAKNRELMGATNPKEAAAGTIRADFADSIDANAVHGSDSLENAKNEIAFFF 131
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_AGRRK (Nucleoside diphosphate kinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 60/133 (45.11%), Postives = 77/133 (57.89%), Query Frame = -3 Query: 263 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 661 TF MIKPD +R L G I FE G + K + + + AE Y +PFFG L++ +TSGP V + EGEG + R I+GATNPA A GTIR A+ G N +HGSD+ E+A EIA WF + I Sbjct: 6 TFSMIKPDATKRNLTGAITKIFEDNGLRVIASKRVWMSKREAEGFYAVHKERPFFGELVDGMTSGPTVVQVLEGEGAILKNREIMGATNPANAAEGTIRKIHALSIGENSVHGSDAPETAAVEIAYWFSETEI 138
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_ACISJ (Nucleoside diphosphate kinase OS=Acidovorax sp. (strain JS42) GN=ndk PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.666e-24 Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = -3 Query: 275 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 661 T +IKPD V + ++G+I RFE G + +++ + R AE+ Y +PFF L++++ SGPV+ EGE V R ++GAT+P + APGTIR D A N +HGSD+ E+AQ E+A +FP Sbjct: 6 TLSIIKPDAVAKNVIGQIYARFEAAGLKIAAARMIHLSRAEAEQFYAVHKERPFFKDLVDFMISGPVMVQALEGENAVLKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVAFFFP 134
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SULNB (Nucleoside diphosphate kinase OS=Sulfurovum sp. (strain NBC37-1) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24 Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 T +IKPD V + ++G+I+ RFE G + K + R AE Y + +PFF L++++ SGPVV + EGE + R ++GATNPA+ PGTIR D A N +HGSDSVE+A+ EI +F Sbjct: 4 TLSIIKPDAVAKNVIGQILARFEAAGLRIAATKKTRLSRVDAEAFYAIHAERPFFKDLVDFMISGPVVVTVLEGENAMAKNRELMGATNPAEAEPGTIRADFADSIDANAVHGSDSVENAEIEINFFF 131
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SINMW (Nucleoside diphosphate kinase OS=Sinorhizobium medicae (strain WSM419) GN=ndk PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.482e-24 Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = -3 Query: 278 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 661 TF MIKPD +R L G I E G + K + + R AE Y +PFFG L+E+++SGP V + EGE + R ++GATNPA A GTIR A+ G N +HGSD+ E+A +EIA WF Sbjct: 6 TFSMIKPDATKRNLTGAITKMLEDAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEFMSSGPTVVQVLEGENAIAKNREVMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAEEIAYWF 133 The following BLAST results are available for this feature:
BLAST of CN189160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189160 ID=CN189160; Name=CN189160; organism=Citrus sinensis; type=EST; length=663bpback to top |