CN189160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDKB_PIG (Nucleoside diphosphate kinase B OS=Sus scrofa GN=NME2 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.227e-46 Identity = 89/146 (60.96%), Postives = 108/146 (73.97%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 661 TFI +KPDGVQRGLVGEII RFE+KGF L LK + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA PGTIRGD I GRNIIHGSDSV+SA+KEI+LWF P+ + ++S WIYE Sbjct: 7 TFIAVKPDGVQRGLVGEIIKRFEQKGFRLVALKFLQASEELLKQHYIDLKDRPFFPGLVKYMGSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVEYKSCAFDWIYE 152
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDKA2_XENLA (Nucleoside diphosphate kinase A2 OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.521e-46 Identity = 87/146 (59.59%), Postives = 108/146 (73.97%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 661 TFI IKPDGVQRGL+G+II RFE+KGF L +K + + +HY DL +PF+ L+EY+ SGPV+AM+WEG VVKTGR ++G TNPA PGTIRGDL I GRNIIHGSDSV+SA KEIALWF D + ++S + W+YE Sbjct: 8 TFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFLQASQDLLRQHYIDLKDRPFYPGLVEYMNSGPVLAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDLCIQVGRNIIHGSDSVDSANKEIALWFKDEELVEYKSCAYEWVYE 153
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SYNP2 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndk PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.211e-46 Identity = 85/146 (58.22%), Postives = 108/146 (73.97%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 661 TF+M+KPDGVQRGLVG++I RFE KGF L GLKL++V R AE+HY +PFFGSL+E+I S PVVAM+WEG+G + R IIGATNP + PGTIRGD + GRN+IHGSD ++A EIALWF + + NW+ + W+YE Sbjct: 4 TFVMVKPDGVQRGLVGDVIRRFEAKGFKLVGLKLVSVSRELAEQHYGVHRERPFFGSLVEFIISVPVVAMVWEGKGAIAAARKIIGATNPLEAEPGTIRGDFGVDIGRNLIHGSDGPDTAASEIALWFSESELANWEPATKAWLYE 149
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_GLOVI (Nucleoside diphosphate kinase OS=Gloeobacter violaceus GN=ndk PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.230e-45 Identity = 89/146 (60.96%), Postives = 109/146 (74.66%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 661 TFI IKPDGVQRGLVGEI+ RFE++GF L GLKLM V A+KHY + +PFFG L+ +ITS PVVA++ EG+GVV T R ++G TNP GTIRGD I GRNIIHGSDS+ESA++EIALWF P + WQ++L W+YE Sbjct: 4 TFIAIKPDGVQRGLVGEILQRFERRGFKLVGLKLMQVSEALAQKHYAEHKERPFFGGLVAFITSSPVVAVVLEGKGVVATARAMMGVTNPLNSPLGTIRGDYGIDIGRNIIHGSDSLESAEREIALWFAPAELLEWQATLGSWVYE 149
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_GINCI (Nucleoside diphosphate kinase (Fragment) OS=Ginglymostoma cirratum PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.230e-45 Identity = 88/146 (60.27%), Postives = 109/146 (74.66%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP-DGPINWQSSLHPWIYE 661 TFI +KPDGVQR +VGE+I RFE+KGF L +K + + EKHY +LS KPF+ LI+Y++SGPVVAM+WEG VVKTGR ++G TNPA PGTIRGD I GRNIIHGSDSVESA+KEI+LWF + + +Q+ WIYE Sbjct: 6 TFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAKKEISLWFKREELVEYQNCAQDWIYE 151
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_CARHZ (Nucleoside diphosphate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ndk PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.606e-45 Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 661 TFIM+KPDGVQRGLVGEII RFEK+GF L GLKLM + R AE HY + KPFF L+ +ITSGPVVAM+WEG+ V+ T R ++GATNP + PGTIRG I GRN+IHGSDS ESA +EIAL+F + ++++ +L WIYE Sbjct: 4 TFIMVKPDGVQRGLVGEIISRFEKRGFKLVGLKLMQISRELAETHYGEHKGKPFFEGLLNFITSGPVVAMVWEGKEVIATAREMMGATNPLKAQPGTIRGTYGIDVGRNVIHGSDSPESAAREIALFFKEEELLSYEKTLDTWIYE 149
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDKB_BOVIN (Nucleoside diphosphate kinase B OS=Bos taurus GN=NME2 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45 Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 661 TFI IKPDGVQRGLVGEII RFE+KGF L +K + ++HY DL +PFF L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA PGTIRGD I GRNIIHGSDSV+SA+KEI LWF P+ I ++ WIYE Sbjct: 7 TFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLQASEELLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEINLWFKPEELIEYKPCAFDWIYE 152
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_DESAP (Nucleoside diphosphate kinase OS=Desulforudis audaxviator (strain MP104C) GN=ndk PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.579e-45 Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 661 TF+M+KPDGVQRGLVGE+I RFE++GF L LKL+ +DR AE+HYE+ KPFF L+ YITSGPV AM+ EG VV T R ++GAT PA+ PGTIRG I GRNI+HGSDS SA +EI L+F DG I ++ +L PWIYE Sbjct: 4 TFVMVKPDGVQRGLVGEVITRFERRGFKLVALKLLWIDRGLAERHYEEHRGKPFFDELVRYITSGPVAAMVLEGREVVTTVREMMGATQPAKALPGTIRGTYGIDVGRNIVHGSDSAASAAREIGLFFADGELIEYERALDPWIYE 149
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDKB_CANFA (Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.579e-45 Identity = 86/146 (58.90%), Postives = 109/146 (74.66%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 661 TFI IKPDGVQRGLVG+I+ RFE+KGF L +K + ++HY DL +PF+ L++Y+ SGPVVAM+WEG VVKTGR ++G TNPA PGTIRGD I GRNIIHGSDSV+SA+KEI+LWF P+ ++++S WIYE Sbjct: 7 TFIAIKPDGVQRGLVGDIVKRFEQKGFRLVAMKFLRASEDLLKEHYIDLKDRPFYPGLVKYMHSGPVVAMVWEGLNVVKTGRMMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFKPEELVDYKSCAFDWIYE 152
BLAST of CN189160 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 4.674e-45 Identity = 87/146 (59.59%), Postives = 107/146 (73.29%), Query Frame = -3 Query: 227 TFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQFAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 661 TFI IKPDGVQRGLVG II RFE+KGF L GLK + R AE+HY +PFF L+E+ITSGP+VA++ EGEGVV R +IGATNP PGTIRGD + GRNIIHGSD++E+AQ+EIALWF + +W ++ PW+YE Sbjct: 4 TFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149 The following BLAST results are available for this feature:
BLAST of CN189160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189160 ID=CN189160; Name=CN189160; organism=Citrus sinensis; type=EST; length=663bpback to top |