CN189159

Overview
NameCN189159
Unique NameCN189159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.057e-38
Identity = 76/89 (85.39%), Postives = 80/89 (89.89%), Query Frame = -2
Query:  300 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 566
            ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN +KAWDD WIFWVGPFIGA +AA YHQY+LRA+A K LGS  S
Sbjct:  195 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQYVLRASAAK-LGSSAS 282          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36
Identity = 74/89 (83.15%), Postives = 78/89 (87.64%), Query Frame = -2
Query:  300 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 566
            ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN+ KAW D WIFWVGP IGA +AA YHQY+LRA+A K LGS  S
Sbjct:  200 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSSSS 287          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 4.281e-35
Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  203 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.281e-35
Identity = 66/83 (79.52%), Postives = 74/83 (89.16%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  202 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKS 284          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.537e-35
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ +WDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  203 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKS 285          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.246e-34
Identity = 68/91 (74.73%), Postives = 76/91 (83.52%), Query Frame = -2
Query:  294 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 566
            ARDS +PVL PLPIGFAVF+VHLATIPITGTGINPARS GAAV+YN+  AW D WIFWVGP IGAF+AA YH+ +LR  A KAL SFRS +
Sbjct:  197 ARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGEAAKALSSFRSTS 287          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.627e-34
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYNK+ AW+D WIFWVGPF+GA +AA YHQ I+RA   K+
Sbjct:  205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKS 287          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN+  AWDD WIFWVGPFIGA +AA YHQ ++RA   K+
Sbjct:  204 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKS 286          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN++ AW+D WIFWVGPFIGA +AA YHQ I+RA   K+
Sbjct:  205 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 287          
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = -2
Query:  318 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKA 566
            ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN++ AW D WIFWVGPFIGA +AA YHQ I+RA   K+
Sbjct:  208 ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKS 290          
The following BLAST results are available for this feature:
BLAST of CN189159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
PIP25_MAIZE7.057e-3885.39Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP23_ORYSJ2.965e-3683.15Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP15_ARATH4.281e-3579.52Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH4.281e-3579.52Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP14_ARATH9.537e-3578.31Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ1.246e-3474.73Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP11_ORYSJ1.627e-3478.31Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ORYSJ2.775e-3478.31Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE2.775e-3478.31Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE3.624e-3478.31Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001G16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189159 ID=CN189159; Name=CN189159; organism=Citrus sinensis; type=EST; length=570bp
CCTTTTTAAGAAAGGATATATAAAAAACACCACCACCACTTATAAACACA
CCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCCTTACACATAG
ATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTACAATTCAATA
GCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAGCTTGAAAAGA
GATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGATCATGCTGTA
AATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGCTTAAGCATTG
CTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGAGAATGTATTG
GTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCAACCCAGAAGA
TCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCACAGCAGCTCCA
AAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGATGGTGGCCAA
GTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCCAAGACCGGAA
CATGGGAGTCTCTTGCGCCT
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