CN189159

Overview
NameCN189159
Unique NameCN189159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = -2 
Query:  339 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 533
            L IGF+V + HL  I  TG  +NPARS   A++  K   +DD W+FW+GP +GA VA+  + Y+L
Sbjct:  162 LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223
[Close]
BLAST of CN189159 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = -2 
Query:  339 LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYIL 533
            L IGF+V + HL  I  TG  +NPARS   A++  K   +DD W+FW+GP +GA VA+  + Y+L
Sbjct:  162 LSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223
The following BLAST results are available for this feature:
BLAST of CN189159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
AQP2_SHEEP5.630e-1146.15Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_BOVIN5.630e-1146.15Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001G16_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189159 ID=CN189159; Name=CN189159; organism=Citrus sinensis; type=EST; length=570bp
CCTTTTTAAGAAAGGATATATAAAAAACACCACCACCACTTATAAACACA
CCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCCTTACACATAG
ATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTACAATTCAATA
GCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAGCTTGAAAAGA
GATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGATCATGCTGTA
AATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGCTTAAGCATTG
CTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGAGAATGTATTG
GTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCAACCCAGAAGA
TCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCACAGCAGCTCCA
AAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGATGGTGGCCAA
GTGAACCATGAACACAGCAAACCCAATGGGGAGTGGTGCCAAGACCGGAA
CATGGGAGTCTCTTGCGCCT
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