CN189155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 39/89 (43.82%), Postives = 54/89 (60.67%), Query Frame = -2 Query: 427 LEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRY 693 L G F G+ELL+W L LP S+ T + +EAF L A +L+++ FR + +++L+ T RYYS W+TWAA IQ AWRRY Sbjct: 549 LGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQFR-RLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRY 636
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = -2 Query: 418 VLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 696 ++ PG F G+ELL+W L + LP+S+ T + +EAF L A++L+++ FR + ++L+ R+YS WRTWAA IQ AWRR+R R Sbjct: 533 LIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQFR-RLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKR 624
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = -2 Query: 418 LEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 693 L PG F G+ELL+W L LP S+ T + +EAF L A++L+++ + FR + +++L+ RYYS WR W IQ AWRRY R Sbjct: 520 LRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFR-RLHSKKLQHAFRYYSHQWRAWGTCFIQAAWRRYMKR 610
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 42/122 (34.43%), Postives = 64/122 (52.46%), Query Frame = -2 Query: 328 LEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNESNRLMRYAAMFMSI 693 L+P F G++LL+W L P S+ T + +EAF L A +L+ + FR + +++L+ T R+YS WRTW A IQ AWRR+ R ++ E+ N + R AA S+ Sbjct: 537 LKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQFR-RLHSKQLQHTFRFYSVQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSL 657
BLAST of CN189155 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 35/92 (38.04%), Postives = 52/92 (56.52%), Query Frame = -2 Query: 418 LEPGGFLGDELLSWCLRRPFIDRLPASSATFVCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMR 693 L+ F G++LL W L P S+ T + +EAF L A++L+ + FR + +++L+ T R+YS WRTW+ IQ AWRRY R Sbjct: 536 LKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQFR-RLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRR 626 The following BLAST results are available for this feature:
BLAST of CN189155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189155 ID=CN189155; Name=CN189155; organism=Citrus sinensis; type=EST; length=706bpback to top |