CN189120

Overview
NameCN189120
Unique NameCN189120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2U1_RAT (Cytochrome P450 2U1 OS=Rattus norvegicus GN=Cyp2u1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29
Identity = 77/232 (33.19%), Postives = 124/232 (53.45%), Query Frame = 1
Query:   34 FVDA-LLNLQEEYE------LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPR 708
            F+D  LL+ QEE +        +D +  ++ ++ IAG DTTT ++ W +  +  NP VQ+K  EE+++V+G +R  +  D   + Y +  + E  RL    PL +PH  +    + GY++PKG+VV  N+W+I RDP  W+ P +F P RFL++   +   +   +PFG G+R+C G QL    +  M   L+  F +A  +G   E+  M G  G +T    P  V  + R
Sbjct:  303 FIDMYLLHTQEEKDKCKGTNFDEDYLFYIIGDLFIAGTDTTTNSLLWCLLYMSLNPGVQKKVHEEIERVIGRDRAPSLTDKAQMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGYSIPKGTVVLPNLWSIHRDPVIWEKPDDFCPHRFLDDQGQLLKRE-TFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFALPEG--SEKPIMTGRFG-LTLAPHPFNVTVSKR 530          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29
Identity = 76/232 (32.76%), Postives = 126/232 (54.31%), Query Frame = 1
Query:   34 FVDA-LLNLQEEYELS------DDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPR 708
            F+D  LL+++EE   S      +D +  ++ ++ IAG DTTT ++ W +  +  NP VQ+K  EE+++V+G +R  +  D   + Y +  + E  RL    PL +PH  +    + G+ +PKG+VV +N+W++ RDPA W+ P +F P RFL++   +   +   +PFG G+R+C G QL    +  M   L+  F +A  +G   E+  M G  G +T    P  V  + R
Sbjct:  303 FIDMYLLHMEEEQGASRRSSFDEDYLFYIIGDLFIAGTDTTTNSLLWCLLYMSLNPDVQKKVHEEIERVIGCDRAPSLTDKAQMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRFLDDQGQLLKRE-TFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEG--SEKPVMTGRFG-LTLAPHPFNVTISKR 530          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29
Identity = 69/185 (37.30%), Postives = 107/185 (57.84%), Query Frame = 1
Query:   55 LQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED---IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            L+   EL+DD ++  + ++  AG++TTT  ++WA+  L+  P VQ+K QEE+DQ +G  R    +D   L YL+  + E +R+ P +PL++PH + AD  I  Y++PKG+ V +N+W++  D  +W  P EF P RFL+E    I      Y  LPFG+G R+C G  L    +   L  +L  F
Sbjct:  284 LEPGLELTDDHLLMTVGDIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFLDEQGQHIHSPSPSY--LPFGAGIRVCLGEVLAKMELFLFLAWVLQRF 466          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 75/209 (35.89%), Postives = 109/209 (52.15%), Query Frame = 1
Query:   31 HFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED--IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAG 651
            H  +  L+     +LSD+ II ++ ++  AG DT T  + W++  L+ NPRVQ+K QEELD V+G +R    +D  +L Y++  + E+ R     P  +PH    D  + G+ +PKG  V VN W I  D   W NP EF PERFL  D  ID K    +++ FG G+R C G  +    V   L  LL    ++   GVK +   + G
Sbjct:  288 HCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYG 495          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2U1_HUMAN (Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29
Identity = 68/207 (32.85%), Postives = 116/207 (56.04%), Query Frame = 1
Query:   34 FVDA-LLNLQEEYE------LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA-PAKGVKP 630
            F+D  LL+++EE +        ++ +  ++ ++ IAG DTTT ++ W +  +  NP VQ+K  EE+++V+G NR  +  D   + Y +  + E  RL    PL +PH  + +  + GY +PKG+++  N+W++ RDPA W+ P +F P RFL++   +   +   +PFG G+R+C G QL    +  M   L+  F +A P    KP
Sbjct:  317 FIDMYLLHMEEERKNNSNSSFDEEYLFYIIGDLFIAGTDTTTNSLLWCLLYMSLNPDVQEKVHEEIERVIGANRAPSLTDKAQMPYTEATIMEVQRLTVVVPLAIPHMTSENTVLQGYTIPKGTLILPNLWSVHRDPAIWEKPEDFYPNRFLDDQGQLIKKE-TFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFAFALPEDSKKP 522          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.362e-29
Identity = 65/166 (39.16%), Postives = 99/166 (59.64%), Query Frame = 1
Query:   64 EYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED---IDMKGHDYRLLPFGSGRRICPGIQL 552
            E  L+DD ++  + ++  AG++T++    W +  LI +P VQ+K QEE+D  +G  R    +D  N+++L   + E +R+ P +PL++PH A AD  I  Y +PKG+ V +N+WAI  D  +WKNP  F P RFL+ED   +      Y  LPFG+G R+C G  L
Sbjct:  287 EAGLTDDHMVMTVADIFGAGVETSSTAFAWMIIYLIHHPEVQKKIQEEIDSNIGFERTPKMSDKGNMNFLNATIHEILRIQPVSPLLIPHVALADSSIGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLDEDGKYVCSSSESY--LPFGAGTRVCLGEML 450          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 81/243 (33.33%), Postives = 127/243 (52.26%), Query Frame = 1
Query:   16 GAAKPHFVDALL-----------NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDID-MKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAGNPGQVTYMTTPLEVVATPR 708
            G      VDALL           N+ ++  L++D I+  + ++  AG++TT+  ++WA+A L+  P VQ+K QEELD  VG  R    +D + LHY +  + E +R+ P +PL++PH A  +  I  Y +PK + V +N+W++  D  +W NP  F P+RFL+E+ + +       LPFG+G R+C G  L    V   L  +L  F     +G      D+ G  G V     P +V+A  R
Sbjct:  270 GETVKDLVDALLKAKLNMENNNSNVSQDVGLTEDHILMTVGDIFGAGVETTSTVLKWAVAYLLHYPEVQKKIQEELDVKVGFGRYPLLSDRKILHYTEAAISEVLRIRPVSPLLIPHVALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFLDENGNRVYSPSPSFLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEG--DPLPDLEGKFG-VVIQVKPFKVIAKLR 509          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP17A_PANTR (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan troglodytes GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = 1
Query:   58 QEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLE-EDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            Q+   LSD+ I+  + ++  AG++TTT  V+W +A L+ NP+V++K  EE+DQ VG +R  T +D   L  L+  ++E +RL P  P+++PHKAN D  I  + V KG+ V +N+WA+  +  +W  P +F PERFL      +       LPFG+G R C G  L    +  ++  LL  F
Sbjct:  282 QDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTQVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRF 463          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP17A_HUMAN (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo sapiens GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.616e-29
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = 1
Query:   58 QEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLE-EDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            Q+   LSD+ I+  + ++  AG++TTT  V+W +A L+ NP+V++K  EE+DQ VG +R  T +D   L  L+  ++E +RL P  P+++PHKAN D  I  + V KG+ V +N+WA+  +  +W  P +F PERFL      +       LPFG+G R C G  L    +  ++  LL  F
Sbjct:  282 QDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRF 463          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP1A1_MACMU (Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 73/209 (34.93%), Postives = 109/209 (52.15%), Query Frame = 1
Query:   31 HFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEED--IDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAG 651
            H  +  L+     +LSD+ I+ ++ ++  AG DT T  + W++  L+ NPRVQ+K QEELD V+G +R    +D  +L Y++  + E+ R     P  +PH    D  + G+ +PKG  V VN W I  D   W NP EF PERF+  D  ID K    +++ FG G+R C G  +    V   L  LL    ++   GVK +   + G
Sbjct:  288 HCQEKQLDENANIQLSDEKIVNVVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFITPDGAID-KVLSEKVILFGLGKRKCIGETIARWEVFLFLAILLQRVEFSVPPGVKVDMTPIYG 495          
The following BLAST results are available for this feature:
BLAST of CN189120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2U1_RAT2.530e-2933.19Cytochrome P450 2U1 OS=Rattus norvegicus GN=Cyp2u1... [more]
CP2U1_MOUSE2.530e-2932.76Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]
CP17A_CHICK3.305e-2937.30Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
CP1A1_HUMAN4.316e-2935.89Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
CP2U1_HUMAN7.362e-2932.85Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1... [more]
CP17A_SQUAC7.362e-2939.16Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
CP17A_RANDY9.616e-2933.33Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CP17A_PANTR9.616e-2937.36Steroid 17-alpha-hydroxylase/17,20 lyase OS=Pan tr... [more]
CP17A_HUMAN9.616e-2937.36Steroid 17-alpha-hydroxylase/17,20 lyase OS=Homo s... [more]
CP1A1_MACMU1.256e-2834.93Cytochrome P450 1A1 OS=Macaca mulatta GN=CYP1A1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189120 ID=CN189120; Name=CN189120; organism=Citrus sinensis; type=EST; length=730bp
CGTTAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCT
CAATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTAC
TTTGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAA
TGGGCAATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCA
GGAAGAACTAGACCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAG
ACTTTCAAAACCTGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGG
CTACACCCACCAACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGT
AAAAATCAGCGGCTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACG
TTTGGGCCATAGGCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTT
AGGCCTGAGAGGTTCTTAGAGGAGGACATTGACATGAAAGGACACGATTA
TCGATTGTTACCATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAAC
TTGGCATAAATTTAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTT
TGGTGGGCACCGGCTAAAGGAGTGAAGCCTGAGGAAATTGATATGGCCGG
GAACCCTGGACAGGTCACGTACATGACCACACCCCTTGAGGTTGTGGCTA
CCCCGCGGTTGGCTGATCATGGCCTGTACA
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