CN189120

Overview
NameCN189120
Unique NameCN189120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:949..1678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.539e-18
Identity = 55/205 (26.83%), Postives = 104/205 (50.73%), Query Frame = 1
Query:   13 GGAAKPHFVDALLNLQEEY-ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVV-GPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKG 621
            G + +   +D ++ + E   + +++ I+      ++AG D+    V + +  L +NP  Q +   EL  +    NR  T  D   + Y++  +KE++RL+P  PL +  K   +V+++ + +P GS V +  +A  R    + +P +F+PERF  E+ + + H Y  LPF +G R C G +  I  + +++  LL  +   P  G
Sbjct:  276 GNSERKCLLDHMIEISESNRDFTEEDIVNEACTFMLAGQDSVGAAVAFTLFLLTQNPECQDRCVLELATIFEDSNRAPTMTDLHEMRYMEMCIKEALRLYPSVPL-IARKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENR-HPYAFLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQLLPVTG 478          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4B1_RABIT (Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CYP4B1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 53/178 (29.78%), Postives = 92/178 (51.69%), Query Frame = 1
Query:   34 FVDALLNLQEE--YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIN 561
            F+D LL+++ E   +LSD  +   +   +  G DTTT  + W +  +   P  QQ+ +EE+ +++G        D   + YL   +KE  RL+PP P +    +     + G ++P GS++ ++++A+ R+   W +P  F P RF  E+   + H Y  +PF +G R C G Q  +N
Sbjct:  280 FLDILLDVRGESGVQLSDTDLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQQRCREEVREILGDQDSFQWEDLAKMTYLTMCMKECFRLYPPVPQVYRQLSKPVSFVDGRSLPAGSLISLHIYALHRNSDVWPDPEVFDPLRFSPENSSGR-HPYAFIPFSAGPRNCIGQQFAMN 456          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4AL_PIG (Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus scrofa GN=CYP4A21 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 54/195 (27.69%), Postives = 92/195 (47.18%), Query Frame = 1
Query:   34 FVDALL--NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 612
            F+D LL   ++    LSD  +   +   + AG D+T   + W +  L  NP  QQ+ +EE+  ++G    +T      + Y    +KE++RL+PP P +    +       G ++P G ++ ++++ +  +P  W NP EF P RF         H +  +PF  G R C G Q  +N +  ++   L  F  AP
Sbjct:  285 FLDILLFARMENGNSLSDTDVRAEVDTFMAAGHDSTASGISWVLYALASNPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELSKPITFPDGRSLPAGIILSLSIYGLHHNPQVWPNPEEFDPSRFAP---GSARHSHAFMPFSGGSRNCIGKQFAMNEMKVVVALTLLRFELAP 476          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2C2_RABIT (Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CYP2C2 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18
Identity = 57/209 (27.27%), Postives = 103/209 (49.28%), Query Frame = 1
Query:   34 FVDALL------NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEID 642
            F+D  L         ++ E + + ++  + ++ +AG +TT+ T+ + +  L+K+P V  K QEE+++V+G +R     D   + Y    V E  R     P  +PH    ++K   Y +PKG+ V  ++ ++  D  ++ NP  F P  FL+   + +  DY  +PF +G+R+C G  L    +   L  +L +F   P   V P  +D
Sbjct:  263 FIDCFLIKMEQEKCNQQSEFTIENLLTTVSDVFMAGTETTSTTLRYGLLLLMKHPEVIAKVQEEIERVIGRHRSPCMQDRSRMPYTDATVHEIQRYINLIPNNVPHTTICNLKFRNYLIPKGTDVLTSLSSVLHDDKEFPNPDRFDPGHFLDASGNFRKSDY-FMPFSTGKRVCVGEALARMELFLFLTAILQNF--TPKPLVNPNNVD 468          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18
Identity = 55/186 (29.57%), Postives = 96/186 (51.61%), Query Frame = 1
Query:   34 FVDALLNLQEE--YELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIN---LVTSM 576
            F+D LL  ++E   +LSD  +   +   +  G DTTT  + W +  +   P  Q + +EE+ +++G        D   + YL   +KES RL+PP P +    +     + G ++P GS++ ++++A+ R+ A W +P  F   RF  E+   K H +  +PF +G R C G Q  ++   +VT+M
Sbjct:  285 FLDILLGARDEDDIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPEHQHRCREEVREILGDQDFFQWDDLGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEVFDSLRFSTENAS-KRHPFAFMPFSAGPRNCIGQQFAMSEMKVVTAM 469          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP240_MOUSE (Cytochrome P450 2C40 OS=Mus musculus GN=Cyp2c40 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.428e-18
Identity = 56/195 (28.72%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   61 EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDM 645
            E  + + + +  L+ +++  G +T + T+ +A+  L+K+  +  K QEE+D V+G +R     D  ++ Y   +V E  R     P  + H+   D K   Y + KG+ V  ++ ++  D  ++ NP  F P  FL+++ + K  DY  +PF +G+RIC G  L    +   L  +L +F   P   V P++IDM
Sbjct:  278 EHMDYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHITAKVQEEIDNVIGRHRSPCMQDRNHMPYTNAMVHEVQRYIDLGPNGVVHEVTCDTKFRNYFILKGTQVMTSLTSVLHDSTEFPNPEVFDPGHFLDDNGNFKKSDY-FVPFSAGKRICVGESLARMELFLFLTTILQNFKLKPL--VDPKDIDM 469          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4AE_RAT (Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a14 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18
Identity = 50/178 (28.09%), Postives = 85/178 (47.75%), Query Frame = 1
Query:   34 FVDALL--NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIN 561
            F+D LL   +++   LSD+ +   +   +  G DTT   + W    L  +P  Q++ +EE+  ++G    +T      + Y    +KE++RL+PP P +    ++      G ++PKG    + ++ +  +P+ W NP  F P RF     D   H +  LPF  G R C G Q  +N
Sbjct:  288 FLDILLFAKMEDGKSLSDEDLRAEVDTFMFEGHDTTASGISWVFYALATHPEHQERCREEVQSILGDGTSVTWDHLDQIPYTTMCIKEALRLYPPVPSVSRELSSPVTFPDGRSIPKGITTTILIYGLHHNPSYWPNPKVFDPSRF---SPDSPRHSHAYLPFSGGARNCIGKQFAMN 462          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.477e-18
Identity = 52/180 (28.89%), Postives = 94/180 (52.22%), Query Frame = 1
Query:   70 ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFL---EEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            +LS    +G L  +++AG+DTT+ T+ WA+  L KNP +Q   ++E+  VV   +V    DF ++  L+ V+KE++RL+P  P       + ++++ G+  PK +      +   RDP+ +  P  F P R+L   + +     H +  +PFG G R C G ++    +  +L  L+  +
Sbjct:  322 QLSPREALGSLPELLLAGVDTTSNTLTWALYHLSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTFSEPDTFWPYRWLRKGQPETSKTQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQRY 501          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4X1_RAT (Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 51/178 (28.65%), Postives = 89/178 (50.00%), Query Frame = 1
Query:   31 HFVDALLNLQ--EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGI 558
            +F+D +L+ Q  +E   SD  +   +   + AG D +  ++ W +  L  NP  Q + + E+  ++G    +T      + Y    +KE++RL PP P +    +       G+++P G  V +++W +  +PA WK+P  F P RF +E+ + + H    LPF SG R C G Q  +
Sbjct:  283 NFLDIVLSAQAGDEKAFSDADLRSEVNTFMWAGHDASAASISWLLYCLALNPEHQDRCRTEIRSILGDGSSITWEQLDEIPYTTMCIKETLRLIPPIPSISRELSKPLTLPDGHSLPAGMTVVLSIWGLHHNPAVWKDPKVFDPLRFTKENSEQR-HPCAFLPFSSGPRNCIGQQFAM 459          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 59/196 (30.10%), Postives = 103/196 (52.55%), Query Frame = 1
Query:   46 LLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGP--NRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVK----ISGYNV-PKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 612
            L++  +   L++D I   +   +  G DTTT  + + + EL ++P VQ K  EE+ QV+G   +R ++  D   L Y++CV+KES+R++PP P+ +  K   D K    + G  V P GS + + ++ + R P  + NP EF PER    +   +   ++++PF +G R C G +     +  ML  ++  +   P
Sbjct:  243 LMSTVDGRPLTNDEIREEVDTFMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESLRMYPPVPI-VGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPER---HENGSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLP 434          
The following BLAST results are available for this feature:
BLAST of CN189120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C4AA1_DROME1.539e-1826.83Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
CP4B1_RABIT2.010e-1829.78Cytochrome P450 4B1 OS=Oryctolagus cuniculus GN=CY... [more]
CP4AL_PIG2.010e-1827.69Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus s... [more]
CP2C2_RABIT2.010e-1827.27Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CY... [more]
CP4B1_HUMAN3.428e-1829.57Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CP240_MOUSE3.428e-1828.72Cytochrome P450 2C40 OS=Mus musculus GN=Cyp2c40 PE... [more]
CP4AE_RAT4.477e-1828.09Cytochrome P450 4A14 OS=Rattus norvegicus GN=Cyp4a... [more]
CP27A_RABIT4.477e-1828.89Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
CP4X1_RAT7.637e-1828.65Cytochrome P450 4X1 OS=Rattus norvegicus GN=Cyp4x1... [more]
CP4D8_DROME7.637e-1830.10Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189120 ID=CN189120; Name=CN189120; organism=Citrus sinensis; type=EST; length=730bp
CGTTAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCT
CAATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTAC
TTTGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAA
TGGGCAATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCA
GGAAGAACTAGACCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAG
ACTTTCAAAACCTGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGG
CTACACCCACCAACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGT
AAAAATCAGCGGCTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACG
TTTGGGCCATAGGCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTT
AGGCCTGAGAGGTTCTTAGAGGAGGACATTGACATGAAAGGACACGATTA
TCGATTGTTACCATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAAC
TTGGCATAAATTTAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTT
TGGTGGGCACCGGCTAAAGGAGTGAAGCCTGAGGAAATTGATATGGCCGG
GAACCCTGGACAGGTCACGTACATGACCACACCCCTTGAGGTTGTGGCTA
CCCCGCGGTTGGCTGATCATGGCCTGTACA
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