CN189120

Overview
NameCN189120
Unique NameCN189120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:949..1678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 55/201 (27.36%), Postives = 92/201 (45.77%), Query Frame = 1
Query:   34 FVDALL--NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKP 630
            F+D LL   +++   LSD  +   +   +  G DTT   + W +  L  +P  QQ+ +EE+  ++G    +T      + Y    +KE++RL+PP P +    +       G ++P G  + ++++ +  +P  W NP EF P RF         H +  +PF  G R C G Q  +N +   +   L  F  AP    KP
Sbjct:  285 FLDILLLARMEKGNSLSDTDLRAEVDTFMFEGHDTTASGISWILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRFAP---GSARHSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFELAPDPSRKP 482          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2CC_RAT (Cytochrome P450 2C12, female-specific OS=Rattus norvegicus GN=Cyp2c12 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 53/183 (28.96%), Postives = 94/183 (51.37%), Query Frame = 1
Query:   52 NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            N  ++   + + +  L+ N+ I G +T+++T+ +A+  L+K P +  K QEE+ QV+G +R     D  ++ Y   ++ E  R     P  L H+   D K   Y +PKG+ V  ++ ++     ++ NP  F P  FL+E+ + K  DY  +PF +G+R C G  L    +   L  +L +F
Sbjct:  275 NGNQQMNYTQEHLAILVTNLFIGGTETSSLTLRFALLLLMKYPHITDKVQEEIGQVIGRHRSPCMLDRIHMPYTNAMIHEVQRYIDLAPNGLLHEVTCDTKFRDYFIPKGTAVLTSLTSVLHARKEFPNPEMFDPGHFLDENGNFKKSDY-FMPFSAGKRKCVGEGLASMELFLFLTTILQNF 456          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2B5_RABIT (Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CYP2B5 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 61/211 (28.91%), Postives = 103/211 (48.82%), Query Frame = 1
Query:   34 FVDALLNLQEEYELSDDT-------IIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDM 645
            F+D  L L+ E + SD +       +I  +  +  AG +TT+ T+ +    ++K P V ++ Q+E++QV+G +R     D   + Y   V+ E  RL    P   PH    D +  GY +PK + V   + +   DP  ++ P  F P  FL+ D  +K ++   +PF  G+RIC G  +    +      +L +F  + A  V PE+ID+
Sbjct:  264 FIDVYL-LRMEKDKSDPSSEFHHRNLILTVLTLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLVPFGAPHMVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDADGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 470          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2A1_RAT (Cytochrome P450 2A1 OS=Rattus norvegicus GN=Cyp2a1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.637e-18
Identity = 56/195 (28.72%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   31 HFVDA-LLNLQEEY----ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            +F+D+ L+ +QEE     E     ++    ++  AG +T + T+ +    L+K+P V+ K  EE++QV+G NR     D   + Y Q V+ E  R     PL +P +   +    G+ +PKG+ V   + ++  DP  + +P +F P+ FL++   +K  +   LPF +G+R C G  L    +  +L  +L +F
Sbjct:  265 NFIDSFLIRMQEEKNGNSEFHMKNLVMTTLSLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIEQVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPILGSLMTDPKFFPSPKDFDPQNFLDDKGQLK-KNAAFLPFSTGKRFCLGDGLAKMELFLLLTTILQNF 458          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4AA_RAT (Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a10 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18
Identity = 56/195 (28.72%), Postives = 91/195 (46.67%), Query Frame = 1
Query:   34 FVDALL--NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 612
            F+D LL   ++    LSD  +   +   +  G DTT   V W    L  +P  QQ+ +EE+  V+G    +T      + Y    +KE++RL+PP P ++   + +     G ++PKG  V ++++ +  +P  W NP  F P RF     D   H +  LPF  G R C G Q  ++ +  ++   L  F   P
Sbjct:  290 FLDILLLARMENGDSLSDKDLRAEVDTFMFEGHDTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPGIVRELSTSVTFPDGRSLPKGIQVTLSIYGLHHNPKVWPNPEVFDPSRFAP---DSPRHSHSFLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLP 481          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C12A2_MUSDO (Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP12A2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18
Identity = 60/194 (30.93%), Postives = 103/194 (53.09%), Query Frame = 1
Query:   55 LQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGP-NRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMK-----------GHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            L++  ++     + +  +M++AG+DTT+ T    +  L KNP  Q+K +EE+ Q++   +    EA F+N+ YL+  +KES+R++P T      +AN DV ISGY VPKG+++ +N   + +D A +    EF PER+L    + +              +  LPFG G R C G ++    +   +  L+ +F
Sbjct:  312 LEKLVKIDKQIAMVMAMDMLMAGVDTTSSTFTGLLLCLAKNPEKQKKLREEIMQLLPQKDSEFNEAVFKNMPYLRACIKESLRVYPLTVGNARTQAN-DVVISGYRVPKGTLISMNSVTLIKDDAHYPRASEFLPERWLRASKENEKSAECPHALKASSPFVYLPFGFGSRSCIGRRIAEMELELGIARLIRNF 504          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4AE_MOUSE (Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 50/178 (28.09%), Postives = 84/178 (47.19%), Query Frame = 1
Query:   34 FVDALL--NLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGIN 561
            F+D LL   +++   LSD+ +   +   +  G DTT   + W    L  +P  QQ+ +EE+  ++G    +T      + Y    +KE++RL+PP   +    ++      G ++PKG    ++++ +  +P  W NP  F P RF     D   H +  LPF  G R C G Q  +N
Sbjct:  288 FLDILLFARMEDRNSLSDEDLRAEVDTFMFEGHDTTASGISWIFYALATHPEHQQRCREEVQSILGDGTSVTWDHLGQMPYTTMCIKEALRLYPPVISVSRELSSPVTFPDGRSIPKGITATISIYGLHHNPRFWPNPKVFDPSRFAP---DSSHHSHAYLPFSGGSRNCIGKQFAMN 462          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP305_DROME (Probable cytochrome P450 305a1 OS=Drosophila melanogaster GN=Cyp305a1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 58/204 (28.43%), Postives = 95/204 (46.57%), Query Frame = 1
Query:   61 EEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVG-------PNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDMAG 651
            E    ++  ++  + +  IAG  TT+ T+  A+  L   P VQ+K   ++   V        P+    EA      Y+   + E  R    TP+  P +A    K+ GY++PK + + +++ ++  D   WK+PLEFRPERF++        +Y  +PFG GRR C G  L    + S L  ++ HF      G  P  + + G
Sbjct:  290 ESSTFNETQLVMTILDFFIAGSQTTSNTINLALMVLAMRPDVQEKLFSQVTASVAAASTDAFPHLSRREA----FDYMDAFIMEVQRFFHITPITGPRRALWATKLGGYDIPKNATILISLRSVHLDKEHWKDPLEFRPERFIDSAGKCFKDEY-FMPFGMGRRRCLGDALARACIFSFLVRIVQHFSVVLPAGESPSMVLLPG 488          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP11A_HORSE (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Equus caballus GN=CYP11A1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 52/164 (31.71%), Postives = 94/164 (57.32%), Query Frame = 1
Query:  109 MIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            M+  G+DTT+++++W + E+ +N RVQ+  +EE+       +  T    Q +  L+  +KE++RLHP    +  +  N D+ I  Y +P  ++V V+++ +G+DP  + NP  F P R+L+++ D+    +R L FG G R C G ++    +T  L H+L +F
Sbjct:  322 MLAGGVDTTSMSLQWHLYEIARNLRVQEMLREEVLAARRQAQGDTSTMVQMVPLLKASIKETLRLHPIAVTLQRYPQN-DLVIRDYMIPAKTLVQVSIYTMGQDPTFFSNPRRFDPTRWLDKNKDLT--HFRNLGFGWGVRQCLGRRIAELEMTLFLIHILENF 482          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C6A22_DROME (Cytochrome P450 6a22 OS=Drosophila melanogaster GN=Cyp6a22 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 60/209 (28.71%), Postives = 104/209 (49.76%), Query Frame = 1
Query:   16 GAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVG-PNRVMTEADFQNLHYLQCVVKESMRLHPPTPLM--LPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPE 633
            G  +  F++ L+ +++  EL+ + +    +    AG DT+  T+ +A+ EL K P +Q K +EE+DQ +   N   T    Q L Y++ V+ E++R +P  P +  +     A      + +  G ++ + V+ I  DPA +  P +F PERFL + +  +      LPFG G R C G++ G    T  L  LL +F ++      P+
Sbjct:  264 GIVRSDFMNLLIEMKQRGELTIEEMAAQAFIFFAAGFDTSASTLGFALYELAKQPALQAKLREEIDQALRLHNGEFTYDSMQELRYMELVIAETLRKYPILPQLTRISRHLYAAKGDRHFYIEPGQMLLIPVYGIHHDPALYPEPHKFIPERFLADQLAQR-PTAAWLPFGDGPRNCIGMRFGKMQTTIGLVSLLRNFHFSVCPRTDPK 471          
The following BLAST results are available for this feature:
BLAST of CN189120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4AO_PIG7.637e-1827.36Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP2CC_RAT7.637e-1828.96Cytochrome P450 2C12, female-specific OS=Rattus no... [more]
CP2B5_RABIT7.637e-1828.91Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CY... [more]
CP2A1_RAT7.637e-1828.72Cytochrome P450 2A1 OS=Rattus norvegicus GN=Cyp2a1... [more]
CP4AA_RAT9.974e-1828.72Cytochrome P450 4A10 OS=Rattus norvegicus GN=Cyp4a... [more]
C12A2_MUSDO9.974e-1830.93Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP1... [more]
CP4AE_MOUSE1.303e-1728.09Cytochrome P450 4A14 OS=Mus musculus GN=Cyp4a14 PE... [more]
CP305_DROME1.303e-1728.43Probable cytochrome P450 305a1 OS=Drosophila melan... [more]
CP11A_HORSE1.303e-1731.71Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C6A22_DROME1.303e-1728.71Cytochrome P450 6a22 OS=Drosophila melanogaster GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189120 ID=CN189120; Name=CN189120; organism=Citrus sinensis; type=EST; length=730bp
CGTTAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCT
CAATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTAC
TTTGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAA
TGGGCAATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCA
GGAAGAACTAGACCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAG
ACTTTCAAAACCTGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGG
CTACACCCACCAACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGT
AAAAATCAGCGGCTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACG
TTTGGGCCATAGGCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTT
AGGCCTGAGAGGTTCTTAGAGGAGGACATTGACATGAAAGGACACGATTA
TCGATTGTTACCATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAAC
TTGGCATAAATTTAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTT
TGGTGGGCACCGGCTAAAGGAGTGAAGCCTGAGGAAATTGATATGGCCGG
GAACCCTGGACAGGTCACGTACATGACCACACCCCTTGAGGTTGTGGCTA
CCCCGCGGTTGGCTGATCATGGCCTGTACA
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