CN189120

Overview
NameCN189120
Unique NameCN189120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:949..1678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C518A_DICDI (Probable cytochrome P450 518A1 OS=Dictyostelium discoideum GN=cyp518a1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 53/179 (29.61%), Postives = 93/179 (51.96%), Query Frame = 1
Query:   85 TIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYL-QCVVKESMRLHPPTPLMLPHKANADVKISG--YNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 612
            +II ++  +I+AG +T + T EW +  ++ N   Q K   EL   +     M +   +N   L    +KE +RL+PP P  +P + N   +I+G    +PKG+ +  ++++I RD   W +P +F+PERFL++D     H     P+G G + C G+    + +   L +L+ +F   P
Sbjct:  289 SIIPMVNELILAGTETNSSTAEWFILTMVNNLDYQDKIYNELKSTLETTTAMIKLSNRNQTPLFNAALKEVLRLYPPVPFGVPRQVNQSFEINGGSLKIPKGTQIIQSLYSIFRDENYWDSPDQFKPERFLDQD----SHSNNYFPYGIGVKNCIGMGFSQDELYISLSNLVLNFKLLP 463          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C27C1_HUMAN (Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 61/197 (30.96%), Postives = 101/197 (51.27%), Query Frame = 1
Query:   13 GGAAKPHFVDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEE-DIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            GG     F+   L LQE Y          +  M++AG+DTT+ T+ W +  L ++P VQQ    E+ + +G   V T AD   +  ++ ++KE++RL P  P         D+ I GY +PKG+ + +  +A      ++    EFRPER+L + D+D +  ++  +PFG G R C G ++    +  ++  LL HF
Sbjct:  153 GGLLTYLFLSQALTLQEIY--------ANVTEMLLAGVDTTSFTLSWTVYILARHPEVQQTVYREIVKNLGERHVPTAADVPKVPLVRALLKETLRLFPVLP-GNGRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDLD-RVDNFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHF 339          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C13AA_CAEEL (Putative cytochrome P450 CYP13A10 OS=Caenorhabditis elegans GN=cyp-13A10 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 1.303e-17
Identity = 51/179 (28.49%), Postives = 93/179 (51.96%), Query Frame = 1
Query:   70 ELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELD-QVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADW-KNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            +L+   I+G     +IAG DTT +++ +    L  +P VQ+K QEE++ + + P+  ++      L Y+ C++KE++RL+P   +    +     K+    V  G++V V+ W++  D   W  +  EF+PER+L+ + D        + FG G R C G++L       +L H+L  +
Sbjct:  310 QLTTQEIVGQCLVFLIAGFDTTALSLSYTTFLLATHPEVQKKLQEEIERECIEPS--ISFDHLSKLKYMDCIIKETLRLYPLGTMANSRRCMRATKLGNVEVEVGTMVQVDTWSLHTDTKIWGDDAKEFKPERWLDPNCDQVFQKGGYISFGLGPRQCVGMRLAYMEEKMLLAHILRKY 486          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CYPE_BACSU (Probable bifunctional P-450/NADPH-P450 reductase 2 OS=Bacillus subtilis GN=cypE PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 60/177 (33.90%), Postives = 94/177 (53.11%), Query Frame = 1
Query:   73 LSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLE-FRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            L D+ I   +   +IAG +TT+  + +A+  L+ +P   +KAQEE D+V+  +    +   Q L Y++ V+ E++RL+P  P    +     V    Y + KG  V V +  + RD   W    E FRPERF E+   +  H Y+  PFG+G+R C G+Q  +   T +LG +L HF
Sbjct:  252 LDDENIRYQIITFLIAGHETTSGLLSFAIYCLLTHPEKLKKAQEEADRVLTDDTPEYK-QIQQLKYIRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPISKGQPVTVLIPKLHRDQNAWGPDAEDFRPERF-EDPSSIPHHAYK--PFGNGQRACIGMQFALQEATMVLGLVLKHF 424          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP4P3_DROME (Probable cytochrome P450 4p3 OS=Drosophila melanogaster GN=Cyp4p3 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 52/169 (30.77%), Postives = 85/169 (50.30%), Query Frame = 1
Query:  109 MIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPN-RVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 612
            ++  G DTT+I + + +  +   P  Q+K  +E+   +     ++       L  L+  +KE+MRL P  P M           +G  +PKGS + V+V+ I R+P  W +P EFRPERFL E+     H Y  +PF +G+R C G +  +  + +++  LL  F   P
Sbjct:  319 LMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANIDDELNILNIGQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSPEEFRPERFLPEN-SQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILP 486          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2C6_RAT (Cytochrome P450 2C6 OS=Rattus norvegicus GN=Cyp2c6 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  118 AGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            AG +TT+ T+ +A+  L+K P V  K QEE+D+VVG +R     D   + Y      E  R     P  LPH    D+K   Y +PKG+ +  ++ ++  D  ++ +P  F P  FL+ +   K  DY  +PF +G+R+C G  L    +   L  +L +F
Sbjct:  297 AGTETTSTTLRYALLLLLKCPEVTAKVQEEIDRVVGKHRSPCMQDRSRMPYTDAHDHEVQRFIDLIPTNLPHAVTCDIKFRNYLIPKGTTIITSLSSVLHDSKEFPDPEIFDPGHFLDGNGKFKKSDY-FMPFSAGKRMCAGEGLARMELFLFLTTILQNF 456          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2B4_RABIT (Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CYP2B4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 60/211 (28.44%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   34 FVDALLNLQEEYELSDDT-------IIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPAKGVKPEEIDM 645
            F+D  L L+ E + SD +       +I  + ++  AG +TT+ T+ +    ++K P V ++ Q+E++QV+G +R     D   + Y   V+ E  RL    P  +PH    D +  GY +PK + V   + +   DP  ++ P  F P  FL+ +  +K ++   +PF  G+RIC G  +    +      +L +F  + A  V PE+ID+
Sbjct:  264 FIDVYL-LRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLGKRICLGEGIARTELFLFFTTILQNF--SIASPVPPEDIDL 470          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP2AC_MOUSE (Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 51/178 (28.65%), Postives = 93/178 (52.25%), Query Frame = 1
Query:   34 FVDA-LLNLQEEYELSDD----TIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQL 552
            F+D+ L+++Q+E  ++ +     ++    N+  AG +T + T+ +    L+K+P V+ K  EE+D+V+G NR     D   + Y Q V+ E  R     PL +P +   +    G+ +PK + V   + ++  DP  + +P +F P+ FL++   +K      LPF +G+R C G  L
Sbjct:  266 FIDSFLIHMQKEKYVNSEFHMKNLVMTSLNLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIDRVIGRNRQPQYEDHMKMPYTQAVINEIQRFSNFAPLGIPRRITKNTSFRGFFLPKATEVFPILGSLMTDPKFFSSPKDFNPQHFLDDKGQLKKIP-AFLPFSTGKRFCLGDSL 442          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: CP11A_PIG (Cholesterol side-chain cleavage enzyme, mitochondrial OS=Sus scrofa GN=CYP11A1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 54/164 (32.93%), Postives = 95/164 (57.93%), Query Frame = 1
Query:  109 MIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHF 600
            M+  G+DTT++T++W + E+ ++  VQ+  +EE+       +  T    Q +  L+  +KE++RLHP +  +  +  N D+ +  Y +P  ++V V V+A+GRDPA + NP +F P R+L ++ D+    +R L FG G R C G ++    +T  L H+L +F
Sbjct:  322 MLAGGVDTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAQGDTSKMLQLVPLLKASIKETLRLHPISVTLQRYLVN-DLVLRDYMIPAKTLVQVAVYAMGRDPAFFSNPGQFDPTRWLGKERDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 482          
BLAST of CN189120 vs. ExPASy Swiss-Prot
Match: C4AC1_DROME (Probable cytochrome P450 4ac1 OS=Drosophila melanogaster GN=Cyp4ac1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 52/193 (26.94%), Postives = 102/193 (52.85%), Query Frame = 1
Query:   37 VDALLNLQEEYELSDDTIIGLLWNMIIAGMDTTTITVEWAMAELIKNPRVQQKAQEELDQVVGPNRVMTEADFQNLHYLQCVVKESMRLHPPTPLMLPHKANADVKISGYNVPKGSVVHVNVWAIGRDPADWKNPLEFRPERFLEEDIDMKGHDYRLLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAPA 615
            +D LL  + + ++    I   +   +  G DTT+  + + +  L  +  VQ+K  EE++ +   +  ++   F  L YL+CV+KES+R+ P  P  +  +   +  ++G  +PK + + ++++ I RDP  +  P  F+P+RFL E+  +  H +  +PF +G+R C G +  I  +  +L  ++ +F   PA
Sbjct:  290 LDTLLAAEADGQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVENLPEDSDDISMFQFNKLVYLECVIKESLRMFPSVP-FIGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPDRFLPEN-TVNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRNFKLLPA 480          
The following BLAST results are available for this feature:
BLAST of CN189120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C518A_DICDI1.303e-1729.61Probable cytochrome P450 518A1 OS=Dictyostelium di... [more]
C27C1_HUMAN1.303e-1730.96Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE... [more]
C13AA_CAEEL1.303e-1728.49Putative cytochrome P450 CYP13A10 OS=Caenorhabditi... [more]
CYPE_BACSU1.701e-1733.90Probable bifunctional P-450/NADPH-P450 reductase 2... [more]
CP4P3_DROME1.701e-1730.77Probable cytochrome P450 4p3 OS=Drosophila melanog... [more]
CP2C6_RAT1.701e-1732.30Cytochrome P450 2C6 OS=Rattus norvegicus GN=Cyp2c6... [more]
CP2B4_RABIT1.701e-1728.44Cytochrome P450 2B4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2AC_MOUSE1.701e-1728.65Cytochrome P450 2A12 OS=Mus musculus GN=Cyp2a12 PE... [more]
CP11A_PIG1.701e-1732.93Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C4AC1_DROME1.701e-1726.94Probable cytochrome P450 4ac1 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F14_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189120 ID=CN189120; Name=CN189120; organism=Citrus sinensis; type=EST; length=730bp
CGTTAAAAGGGTGGAGGAGCTGCTAAGCCACACTTCGTTGATGCGTTGCT
CAATTTGCAAGAGGAATATGAACTTAGTGATGATACAATTATTGGGCTAC
TTTGGAACATGATAATAGCAGGCATGGACACCACAACAATAACTGTAGAA
TGGGCAATGGCAGAGCTCATAAAAAACCCTAGAGTGCAACAAAAAGCTCA
GGAAGAACTAGACCAAGTAGTAGGCCCTAATCGCGTCATGACAGAAGCAG
ACTTTCAAAACCTGCACTATCTCCAGTGCGTGGTCAAAGAATCAATGCGG
CTACACCCACCAACGCCTCTAATGCTGCCCCACAAAGCCAACGCCGATGT
AAAAATCAGCGGCTACAACGTCCCGAAAGGATCAGTCGTACATGTAAACG
TTTGGGCCATAGGCAGAGACCCTGCTGATTGGAAAAACCCGTTGGAATTT
AGGCCTGAGAGGTTCTTAGAGGAGGACATTGACATGAAAGGACACGATTA
TCGATTGTTACCATTTGGTTCGGGGAGAAGAATTTGTCCCGGCATACAAC
TTGGCATAAATTTAGTGACCTCGATGTTGGGTCATCTTTTGCACCATTTT
TGGTGGGCACCGGCTAAAGGAGTGAAGCCTGAGGAAATTGATATGGCCGG
GAACCCTGGACAGGTCACGTACATGACCACACCCCTTGAGGTTGTGGCTA
CCCCGCGGTTGGCTGATCATGGCCTGTACA
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