CN189116

Overview
NameCN189116
Unique NameCN189116
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length548
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12367 contig Csv1_Contig12367:631..1178. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_DROPS (Probable L-asparaginase GA20639 OS=Drosophila pseudoobscura pseudoobscura GN=GA20639 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.226e-14
Identity = 48/126 (38.10%), Postives = 65/126 (51.59%), Query Frame = -2
Query:  143 ETVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYASNL-CGVSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVIKESLDE--GQAVFIAVSKNGEVSCGFNANGMFRGCATED 511
            ETVG V +   G+    TSTGG+  K  GRIGD+P++G GTYA N   GVS T  G  I+R  LA+ + A +E+ G+  Q A D   +E      G    I V   G++   F +  M  G   +D
Sbjct:  183 ETVGAVAMDHNGQIVVGTSTGGITGKWPGRIGDTPILGSGTYADNARGGVSTTGHGETIMRYNLAQRILAAIEHKGMSAQAAADQECREMTRRIGGTGGAIVVGHAGDLGISFTSQRMAWGYIQDD 308          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_DANRE (L-asparaginase OS=Danio rerio GN=asrgl1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.884e-13
Identity = 50/115 (43.48%), Postives = 66/115 (57.39%), Query Frame = -2
Query:  176 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYASNLCG-VSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVI---KESLDEGQAVFIAVSKNGEVSCGFNA 508
            TVG V V  +G  A ATSTGG++NK  GR+GD+P +G G YA N  G VS T  G AI++ TL+R V   ME  G   +EA D  +   KE +D G    + V  NG  +  F++
Sbjct:  167 TVGAVAVDMDGNIACATSTGGMINKMEGRVGDTPCVGCGGYADNKIGAVSPTGHGEAIMKVTLSRLVLFHME-QGKTPEEASDLALAYMKERVD-GLGGVVVVDHNGTWAARFSS 279          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_HUMAN (L-asparaginase OS=Homo sapiens GN=ASRGL1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.198e-13
Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = -2
Query:  116 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYASNLCG-VSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVI--KESLDEGQAVFIAVSKNGEVSCGFNANGMFRGCATEDGFSEVGIWP 508
            TVG V +  +G  A ATSTGG++NK  GR+GDSP +G G YA N  G VS T  G +I++  LAR     +E  G  ++EA D  +   +S  +G    I VSK G+    + +  M    A +DG    GI P
Sbjct:  168 TVGAVALDCKGNVAYATSTGGIVNKMVGRVGDSPCLGAGGYADNDIGAVSTTGHGESILKVNLARLTLFHIE-QGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSM-PWAAAKDGKLHFGIDP 299          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_MACFA (L-asparaginase OS=Macaca fascicularis GN=ASRGL1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.352e-13
Identity = 51/134 (38.06%), Postives = 72/134 (53.73%), Query Frame = -2
Query:  116 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYASNLCG-VSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVI--KESLDEGQAVFIAVSKNGEVSCGFNANGMFRGCATEDGFSEVGIWP 508
            TVG V +  +G  A ATSTGG++NK  GR+GD+P +G G YA N  G +S T  G +I++  LAR     +E  G  ++EA D  +   +S  +G    I VSK G+    + +  M    A +DG    GI P
Sbjct:  168 TVGAVALDFKGNVAYATSTGGIVNKMVGRVGDTPCVGAGGYADNDIGAISTTGHGESILKVNLARLTLFHIE-QGKTVEEAADLSLGYMKSRVKGLGGLIVVSKTGDWVAKWTSTSM-PWAAAKDGKLHFGIDP 299          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_XENLA (L-asparaginase OS=Xenopus laevis GN=asrgl1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.721e-12
Identity = 53/133 (39.85%), Postives = 71/133 (53.38%), Query Frame = -2
Query:  119 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYASNLCG-VSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVIK--ESLDEGQAVFIAVSKNGEVSCGFNANGMFRGCATEDGFSEVGIW 508
            TVG V +  EG  A ATSTGGL NK  GR+GD+  IG G YA N  G VS T  G +I++  LAR +   ME  G   +EA D  +   +S   G    I V+ +G+ +  F+ N M    A +D    +GI+
Sbjct:  166 TVGAVAIDCEGNVACATSTGGLTNKMVGRVGDTACIGSGGYADNNVGAVSTTGHGESIMKVILARLILHHME-QGKSPEEAADAGLNYMKSRVGGIGGVIIVNSSGDWTAKFSTNQM-SWAAVKDDQLHIGIY 296          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_BOVIN (L-asparaginase OS=Bos taurus GN=ASRGL1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = -2
Query:  122 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYASNLCG-VSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVI--KESLDEGQAVFIAVSKNGEVSCGFNANGMFRGCATEDGFSEVGI 508
            TVG V +  +G  A ATSTGG++NK  GR+GD+P +G G YA N  G VS T  G +I++  LAR +A      G  L+EA +  +   +S  +G    I V+K GE +  + +  M    A +DG    GI
Sbjct:  168 TVGAVALDCQGNLAYATSTGGIVNKMPGRVGDTPCVGSGGYADNDIGAVSTTGHGESILKVNLAR-LALFHVEQGKSLEEAANASLGHMKSKVKGVGGIIMVNKAGEWAVKWTSTSM-PWAAAKDGKLHSGI 297          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_MOUSE (L-asparaginase OS=Mus musculus GN=Asrgl1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.350e-11
Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = -2
Query:  122 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYA-SNLCGVSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVI--KESLDEGQAVFIAVSKNGEVSCGFNANGMFRGCATEDGFSEVGI 508
            TVG V +   G  A ATSTGG++NK  GR+GDSP IG G YA +NL  VS T  G +I++  LAR +A      G  ++EA    +   +S  +G    I V+K G+    + +  M    A ++G  + GI
Sbjct:  185 TVGAVALDCRGNLAYATSTGGIVNKMVGRVGDSPCIGAGGYADNNLGAVSTTGHGESILKVNLAR-LALFHVEQGKTVEEAAQLALDYMKSKLKGLGGLILVNKTGDWVAKWTSASM-PWAAVKNGKLQAGI 314          
BLAST of CN189116 vs. ExPASy Swiss-Prot
Match: ASGL1_RAT (L-asparaginase OS=Rattus norvegicus GN=Asrgl1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-11
Identity = 49/132 (37.12%), Postives = 71/132 (53.79%), Query Frame = -2
Query:  122 TVGCVVVAQEGRCAAATSTGGLMNKRTGRIGDSPLIGVGTYA-SNLCGVSCTREGVAIIRATLARDVAAVMEYTGLCLQEAVDFVI--KESLDEGQAVFIAVSKNGEVSCGFNANGMFRGCATEDGFSEVGI 508
            TVG V +  +G  A ATSTGG++NK  GR+GDSP IG G YA +NL  VS T  G +I++  LAR +A      G  + EA    +   +S  +G    I ++K G+    + +  M    A ++G  + GI
Sbjct:  191 TVGAVALDCKGNLAYATSTGGIVNKMVGRVGDSPCIGAGGYADNNLGAVSTTGHGESILKVNLAR-LALFHVEQGKTVDEAATLALDYMKSKLKGLGGLILINKTGDWVAKWTSASM-PWAAVKNGKLQAGI 320          
The following BLAST results are available for this feature:
BLAST of CN189116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ASGL1_DROPS2.226e-1438.10Probable L-asparaginase GA20639 OS=Drosophila pseu... [more]
ASGL1_DANRE1.884e-1343.48L-asparaginase OS=Danio rerio GN=asrgl1 PE=2 SV=1[more]
ASGL1_HUMAN4.198e-1339.55L-asparaginase OS=Homo sapiens GN=ASRGL1 PE=1 SV=2[more]
ASGL1_MACFA9.352e-1338.06L-asparaginase OS=Macaca fascicularis GN=ASRGL1 PE... [more]
ASGL1_XENLA2.721e-1239.85L-asparaginase OS=Xenopus laevis GN=asrgl1 PE=2 SV... [more]
ASGL1_BOVIN1.034e-1138.64L-asparaginase OS=Bos taurus GN=ASRGL1 PE=2 SV=1[more]
ASGL1_MOUSE1.350e-1137.88L-asparaginase OS=Mus musculus GN=Asrgl1 PE=1 SV=1[more]
ASGL1_RAT3.008e-1137.12L-asparaginase OS=Rattus norvegicus GN=Asrgl1 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F12_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189116 ID=CN189116; Name=CN189116; organism=Citrus sinensis; type=EST; length=548bp
CCAAATCTACGAGACGCTAGACATAGCAACACTACACGAGGTGCGGCAAT
CAACAGCACCAACATGAGTCATGACCAAAGCATTAAGAGAGGTAACTAAC
AGTTAAAAAGATTTAAGGCCAAATGCCAACTTCCGAGAACCCGTCCTCGG
TAGCACAACCCCTGAACATTCCATTAGCGTTGAAGCCACAAGACACTTCC
CCATTCTTCGACACCGCGATGAATACAGCTTGCCCTTCATCGAGGCTCTC
TTTAATCACAAAATCAACAGCCTCTTGCAGGCACAAGCCTGTGTACTCCA
TCACAGCCGCCACATCACGCGCCAAGGTCGCACGTATGATGGCCACCCCT
TCTCGCGTGCATGAGACCCCACAAAGATTAGAGGCGTAGGTCCCAACACC
AATAAGAGGCGAGTCACCGATTCTGCCGGTCCTCTTATTCATCAGCCCTC
CCGTTGACGTGGCTGCAGCGCACCGACCCTCCTGGGCAACCACAACGCAC
CCAACCGTTTCTGGGGCGTACAGGCTTATTGGAAGTCGGTTCATTTGC
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