CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SYNS3 (Guanylate kinase OS=Synechococcus sp. (strain CC9311) GN=gmk PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = -2
Query:  408 EAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGL 704
            E VA+ G   +L+I+++GAR V+ S  +AI IF+ PPS+EELE+R+R RGTE E+ I +RL+ A+EE+   ++   FD ++ ND LE     L+K + L
Sbjct:   93 ERVAN-GIPVLLEIELEGARQVRKSLPEAIQIFLAPPSVEELEKRIRGRGTEAEEAIQRRLKRAQEEL---EAQTEFDAVIVNDDLETALAELEKQMNL 187          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SYNPX (Guanylate kinase OS=Synechococcus sp. (strain WH8102) GN=gmk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = -2
Query:  408 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGL 707
            VE    AG+  +L+I+++GAR V+ S   A  IF+ PPS EELE R+R RGT++ED I +RL  A+EE+    + G FD ++ ND L++    L+  +GL
Sbjct:   85 VEQQLQAGRPVLLEIELEGARQVRRSFSKARQIFLAPPSFEELERRIRGRGTDSEDAIQQRLLRAREEL---SAQGEFDAVVVNDDLDQALLKLEGLMGL 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_BACHD (Guanylate kinase OS=Bacillus halodurans GN=gmk PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 41/98 (41.84%), Postives = 63/98 (64.29%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            ++ V    D+GK  IL+I+VQGA  V+    + +FIF+ PPS+ EL  R+  RGTETE+ I KR+  AKEEI+  K    +D+++ ND++E   + +K
Sbjct:   86 IQYVRETIDSGKDIILEIEVQGALKVRERFPEGVFIFLMPPSLAELRSRIVGRGTETEEVINKRMNVAKEEIEMMKK---YDYVVENDEVELAVDRIK 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SYNSC (Guanylate kinase OS=Synechococcus sp. (strain CC9605) GN=gmk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 41/100 (41.00%), Postives = 63/100 (63.00%), Query Frame = -2
Query:  408 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGL 707
            VE    AG+  +L+I+++GAR V+ S  D   IF+ PPS +ELE R+R RGT++ED I +RL  A+EE++  +    FD ++ ND LE     ++  +GL
Sbjct:   88 VEQQMAAGRPVLLEIELEGARQVRRSFPDGFQIFLAPPSFDELERRIRGRGTDSEDAIQRRLTRAREELEAQQE---FDAVVINDDLESALNQVETLMGL 184          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CLOPS (Guanylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=gmk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = -2
Query:  423 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 710
            +VE + D GK  IL+ID+QGA  VK    D +FIFI PPSMEEL++R+  RG+ET + ++ R ++A +EI        +++ + ND +E+  + ++
Sbjct:   93 SVEKMLDEGKNVILEIDIQGALKVKEKATDGVFIFILPPSMEELKQRIIKRGSETPESLMTRFKSAYKEINYVSK---YNYAVVNDNVEDAVKKIE 185          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CLOPE (Guanylate kinase OS=Clostridium perfringens GN=gmk PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = -2
Query:  423 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 710
            +VE + D GK  IL+ID+QGA  VK    D +FIFI PPSMEEL++R+  RG+ET + ++ R ++A +EI        +++ + ND +E+  + ++
Sbjct:   93 SVEKMLDEGKNVILEIDIQGALKVKEKATDGVFIFILPPSMEELKQRIIKRGSETPESLMTRFKSAYKEINYVSK---YNYAVVNDNVEDAVKKIE 185          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CLOP1 (Guanylate kinase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=gmk PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 38/96 (39.58%), Postives = 62/96 (64.58%), Query Frame = -2
Query:  423 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 710
            +VE + D GK  IL+ID+QGA  VK    D +FIFI PPSMEEL++R+  RG+ET + ++ R ++A +EI        +++ + ND +E+  + ++
Sbjct:   93 SVEKMLDEGKNVILEIDIQGALKVKEKATDGVFIFILPPSMEELKQRIIKRGSETPESLMTRFKSAYKEINYVSK---YNYAVVNDNVEDAVKKIE 185          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_TRIEI (Guanylate kinase OS=Trichodesmium erythraeum (strain IMS101) GN=gmk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = -2
Query:  414 DAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHL 692
            + G+  IL+I++QGAR ++ +  DA+ IFI PPSM ELEERL  RG ++E+ I KRL+ A EE++       FD  L ND +E+  +NL K L
Sbjct:   92 EQGRSMILEIELQGARQIQRTFPDALRIFILPPSMAELEERLWGRGQDSEEAITKRLQRATEELEAATE---FDIQLVNDSIEDTLQNLDKIL 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_DESDG (Guanylate kinase OS=Desulfovibrio desulfuricans (strain G20) GN=gmk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = -2
Query:  423 GKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 686
            G+  + DIDVQGA  ++ S     ++FI PPS  ELE RLRARGT+ ED I +RL NA+ E++Q   +  F+  + ND LE+ Y+ L+
Sbjct:   97 GRDVLFDIDVQGAAQLRGSLKQGCYVFILPPSGAELERRLRARGTDPEDTIRRRLANARRELQQ---AHWFNAWIVNDNLEQAYDELR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_MYXXD (Guanylate kinase OS=Myxococcus xanthus (strain DK 1622) GN=gmk PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14
Identity = 37/84 (44.05%), Postives = 59/84 (70.24%), Query Frame = -2
Query:  423 ILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 674
            I DIDVQG +++K    DA+ IF+ PPSMEELE RLR R T++++ I +R+  A+ EI++G +S  +D+++ ND  E  + +L+
Sbjct:  104 IFDIDVQGGQAIKRKHPDAVTIFVLPPSMEELERRLRDRQTDSDETIRRRMLAARSEIERGIAS--YDYVVVNDDFERAFSDLR 185          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_SYNS31.692e-1444.44Guanylate kinase OS=Synechococcus sp. (strain CC93... [more]
KGUA_SYNPX2.210e-1443.00Guanylate kinase OS=Synechococcus sp. (strain WH81... [more]
KGUA_BACHD2.210e-1441.84Guanylate kinase OS=Bacillus halodurans GN=gmk PE=... [more]
KGUA_SYNSC2.887e-1441.00Guanylate kinase OS=Synechococcus sp. (strain CC96... [more]
KGUA_CLOPS2.887e-1439.58Guanylate kinase OS=Clostridium perfringens (strai... [more]
KGUA_CLOPE2.887e-1439.58Guanylate kinase OS=Clostridium perfringens GN=gmk... [more]
KGUA_CLOP12.887e-1439.58Guanylate kinase OS=Clostridium perfringens (strai... [more]
KGUA_TRIEI3.770e-1446.24Guanylate kinase OS=Trichodesmium erythraeum (stra... [more]
KGUA_DESDG6.431e-1445.45Guanylate kinase OS=Desulfovibrio desulfuricans (s... [more]
KGUA_MYXXD8.399e-1444.05Guanylate kinase OS=Myxococcus xanthus (strain DK ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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