CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_LACLA (Guanylate kinase OS=Lactococcus lactis subsp. lactis GN=gmk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D GK   L+I+VQGA  VK    D +F+F+ PP +EEL  RL  RGT++ + I  RL  AKEEI+       +D+ + NDK+E   E +KK
Sbjct:   88 VNQTLDEGKDVFLEIEVQGALQVKEKVPDGVFVFLTPPDLEELRGRLVGRGTDSAEVIASRLEKAKEEIRLMSE---YDYAVVNDKVELAAERVKK 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_DESHY (Guanylate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=gmk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = -2
Query:  414 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHL 710
            AVE    AG   IL+I++QGA  VK      +FIF+ PPSM+EL +R+  RGTE+E+ I KRL+ A  E++       +D+++ ND++    + LK  L
Sbjct:   88 AVEQAIQAGNDVILEIEIQGALQVKQRFPQGVFIFVVPPSMDELSQRIHKRGTESEEVIQKRLQTAARELEYVSE---YDYVVVNDEIPLAVDKLKSIL 183          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CARHZ (Guanylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gmk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 45/115 (39.13%), Postives = 72/115 (62.61%), Query Frame = -2
Query:  360 EAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGLDGSIATNHQTSPKGID 704
            EA+A  G+  IL+ID++GAR VK +  + +F+FI PPS+  LEERLR RGT+ E+ I+KR++ A EEI    +   +D+++ ND LE    +L+       ++ T  +  PK ++
Sbjct:   89 EALA-RGQDVILEIDIKGARQVKKTYPEGVFVFILPPSISILEERLRKRGTDKEEIIVKRMQMAWEEI---ANCDWYDYLILNDDLETAVNDLE-------AVLTAEKLKPKRVN 192          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_PELCD (Guanylate kinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gmk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = -2
Query:  390 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGLDGSIAT 707
            ++   + G+  +LDID QGA  +K +  D +FIFI PPS EELE RLR R T+T + I +RL NA+ EI++      +D+++ N+ L    E  K  +  +G  A+
Sbjct:   88 LQEAREQGQDLLLDIDCQGAAQLKRNCPDDVFIFILPPSFEELERRLRGRNTDTAEVIARRLDNARREIRE---LVWYDYLIVNEDLPRAVEEFKSIILAEGCRAS 190          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_NEIMB (Guanylate kinase OS=Neisseria meningitidis serogroup B GN=gmk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = -2
Query:  423 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 713
            E V A+A AG   IL+IDVQGA  V+ +  +A+ IFI PPS + L  RL  RGT++ + I +RL  A+ EI+Q   S +FD ++ ND L    E+L+
Sbjct:   88 EGVNALAAAGYDVILEIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ---SVLFDFVVVNDDLARAEEDLR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_NEIMA (Guanylate kinase OS=Neisseria meningitidis serogroup A GN=gmk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 43/97 (44.33%), Postives = 61/97 (62.89%), Query Frame = -2
Query:  423 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 713
            E V A+A AG   IL+IDVQGA  V+ +  +A+ IFI PPS + L  RL  RGT++ + I +RL  A+ EI+Q   S +FD ++ ND L    E+L+
Sbjct:   88 EGVNALAAAGYDVILEIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ---SVLFDFVVVNDDLARAEEDLR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_NEIG1 (Guanylate kinase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gmk PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = -2
Query:  426 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 713
            E V A+A AG   IL+IDVQGA  V+ +  +A+ IFI PPS + L  RL+ RGT++ + I +RL  A+ EI+Q   S +FD ++ ND LE+   +L
Sbjct:   88 EGVNALAAAGYDVILEIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLKGRGTDSREVIQRRLSKARHEIEQ---SVLFDFVVVNDDLEKAEGDL 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SYMTH (Guanylate kinase OS=Symbiobacterium thermophilum GN=gmk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = -2
Query:  423 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 707
            VE V   G+  ILDID  GAR+V+    DA+ +F+ PPSME L +R+ ARGTE+ + + +RL  A E I++G +   +D+++ ND L      L+
Sbjct:   90 VEEVTAQGQDVILDIDRVGARAVREQYPDAVSVFVIPPSMEALRQRIAARGTESPEAVARRLAEAPEWIREGLT---YDYVIVNDDLARAVAELR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STAAW (Guanylate kinase OS=Staphylococcus aureus (strain MW2) GN=gmk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 35/91 (38.46%), Postives = 61/91 (67.03%), Query Frame = -2
Query:  444 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 716
            V+ V+   D G    L+I+V+GA+ V+    DA+FIF+ PPS+E L ERL  RGTE++++I  R+  A++E++      ++D+++ ND++E
Sbjct:   87 VQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STAAS (Guanylate kinase OS=Staphylococcus aureus (strain MSSA476) GN=gmk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 35/91 (38.46%), Postives = 61/91 (67.03%), Query Frame = -2
Query:  444 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 716
            V+ V+   D G    L+I+V+GA+ V+    DA+FIF+ PPS+E L ERL  RGTE++++I  R+  A++E++      ++D+++ ND++E
Sbjct:   87 VQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_LACLA1.871e-1342.71Guanylate kinase OS=Lactococcus lactis subsp. lact... [more]
KGUA_DESHY1.871e-1340.40Guanylate kinase OS=Desulfitobacterium hafniense (... [more]
KGUA_CARHZ1.871e-1339.13Guanylate kinase OS=Carboxydothermus hydrogenoform... [more]
KGUA_PELCD2.444e-1338.68Guanylate kinase OS=Pelobacter carbinolicus (strai... [more]
KGUA_NEIMB2.444e-1344.33Guanylate kinase OS=Neisseria meningitidis serogro... [more]
KGUA_NEIMA2.444e-1344.33Guanylate kinase OS=Neisseria meningitidis serogro... [more]
KGUA_NEIG12.444e-1344.79Guanylate kinase OS=Neisseria gonorrhoeae (strain ... [more]
KGUA_SYMTH4.168e-1341.05Guanylate kinase OS=Symbiobacterium thermophilum G... [more]
KGUA_STAAW4.168e-1338.46Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_STAAS4.168e-1338.46Guanylate kinase OS=Staphylococcus aureus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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