CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STAAM (Guanylate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gmk PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12
Identity = 34/91 (37.36%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  444 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 716
            V+ V+   D G    L+I+V+GA+ V+    DA+FIF+ PPS++ L ERL  RGTE+ ++I  R+  A++E++      ++D+++ ND++E
Sbjct:   87 VQYVKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESNEKIQSRINEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_SYNJA (Guanylate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 36/88 (40.91%), Postives = 59/88 (67.05%), Query Frame = -2
Query:  423 GKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 686
            G+  +L+I++ GAR V+    DAI IF+ PPS+EELE R+R RG ++E  I +RL+ A++E+    +   FD+++ ND LE+  + L+
Sbjct:  120 GQDVLLEIELAGARQVRQQCPDAIRIFLSPPSLEELERRIRERGQDSEASIQRRLQQARKEL---DAKDEFDYVIVNDNLEQALQELE 204          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRT2 (Guanylate kinase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK    DA+FIF+ PP + ELEERL  RGT++E+ I +R+  A+EEI        +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLNELEERLVGRGTDSEEVIAQRIERAREEIALMSE---YDYTIVNDEVPLAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRT1 (Guanylate kinase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK    DA+FIF+ PP + ELEERL  RGT++E+ I +R+  A+EEI        +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLNELEERLVGRGTDSEEVIAQRIERAREEIALMSE---YDYTIVNDEVPLAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STAEQ (Guanylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 33/91 (36.26%), Postives = 62/91 (68.13%), Query Frame = -2
Query:  444 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 716
            V+ V+   + G    L+I+V+GA+ V+    DA+FIF+ PPS+++L ERL  RGTE++++I  R+  A++E++      ++D+++ ND++E
Sbjct:   87 VQYVKDTMEEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDDLRERLVGRGTESDEKIQSRVNEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_PROMT (Guanylate kinase OS=Prochlorococcus marinus (strain NATL2A) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 36/100 (36.00%), Postives = 65/100 (65.00%), Query Frame = -2
Query:  408 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGL 707
            V+   + G   +L+I+++GAR ++ S  +A  IF+ PP++ ELE+R+R RGTETE+ I  RL  A++E+   K    FD ++ N+ +E+ ++ ++  +GL
Sbjct:   88 VKEKIEKGTNVLLEIELEGARQIRKSFPEAFQIFLAPPNLYELEKRIRGRGTETEESIRDRLSIAEKELIAQKE---FDAVVINEDIEKAFKEIEGFMGL 184          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_PROMM (Guanylate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = -2
Query:  408 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHLGL 713
            + VE     G+  +L+I+++GAR V+ S  +A  IF+ PPS EELE R+R R T+ E+ I +RL  A+EE+   +    FD ++ ND L+     L+  +GL
Sbjct:   89 QPVEQQLSLGRPVLLEIELEGARQVRRSFPEAFQIFLAPPSFEELERRIRGRATDPEEAIQRRLARAREELMAQQE---FDAVVINDNLQVAVIELESLMGL 187          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STAS1 (Guanylate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.702e-12
Identity = 34/91 (37.36%), Postives = 60/91 (65.93%), Query Frame = -2
Query:  444 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 716
            V+ V+   D G    L+I+V+GA+ V+    DA+FIF+ PPS++ L ERL  RGTE+ ++I  R+  A++E++      ++D+++ ND++E
Sbjct:   87 VQYVKDTMDRGYDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLRERLVGRGTESSEKIQSRVHEARKEVEM---MNLYDYVVVNDEVE 174          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRR6 (Guanylate kinase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = -2
Query:  369 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK-----KHLGLDGSIATNHQTSPK 707
            V    D G    L+I+VQGA  VK    DA+FIF+ PP ++EL++RL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K     +H  +D  I    +  PK
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLDELQDRLVGRGTDSAEVIAQRIEKAKEEIALMRE---YDYAIVNDQVSLAAERVKCVIEAEHFCVDRVIGHYQEMLPK 203          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STAHJ (Guanylate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 34/98 (34.69%), Postives = 64/98 (65.31%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            V+ V+    AG    L+I+V+GA+ V+    DA+FIF+ PPS++ L+ERL  RGTE++++I  R+  A++E++      ++D+++ ND++    E ++
Sbjct:   87 VQYVKDTMAAGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSLDHLKERLVGRGTESDEKIQSRVNEARKEVEM---MNLYDYVVVNDEVHLAKERIQ 181          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_STAAM1.584e-1237.36Guanylate kinase OS=Staphylococcus aureus (strain ... [more]
KGUA_SYNJA2.069e-1240.91Guanylate kinase OS=Synechococcus sp. (strain JA-3... [more]
KGUA_STRT22.069e-1240.63Guanylate kinase OS=Streptococcus thermophilus (st... [more]
KGUA_STRT12.069e-1240.63Guanylate kinase OS=Streptococcus thermophilus (st... [more]
KGUA_STAEQ2.069e-1236.26Guanylate kinase OS=Staphylococcus epidermidis (st... [more]
KGUA_PROMT2.069e-1236.00Guanylate kinase OS=Prochlorococcus marinus (strai... [more]
KGUA_PROMM2.069e-1238.24Guanylate kinase OS=Prochlorococcus marinus (strai... [more]
KGUA_STAS12.702e-1237.36Guanylate kinase OS=Staphylococcus saprophyticus s... [more]
KGUA_STRR63.529e-1235.59Guanylate kinase OS=Streptococcus pneumoniae (stra... [more]
KGUA_STAHJ3.529e-1234.69Guanylate kinase OS=Staphylococcus haemolyticus (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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