CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_PROMA (Guanylate kinase OS=Prochlorococcus marinus GN=gmk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -2
Query:  420 GKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 686
            GK+ +L+I++ GAR V+ +  +   IFI PPS EELE+R+R RGT++E  I  RL  AKEE+    +   FD I+ ND+L+     +KK
Sbjct:   95 GKKVLLEIELDGARQVRKTFPEGFQIFIAPPSFEELEKRIRTRGTDSELAIQSRLNRAKEEL---LAKNEFDAIVINDQLDIALLEIKK 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_DECAR (Guanylate kinase OS=Dechloromonas aromatica (strain RCB) GN=gmk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = -2
Query:  423 AGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 689
            AG+  +L+ID QGA+ V+A    AI +FI PPSMEEL  RL  RGT++ D I +RL  A+ E++     G FD+++ ND+L +  ++L+
Sbjct:   92 AGRDVLLEIDWQGAQQVRALFPQAIGVFILPPSMEELTRRLTGRGTDSPDVIDRRLAAAQAEMRH---VGEFDYVIINDQLAQALDDLR 177          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRPN (Guanylate kinase OS=Streptococcus pneumoniae GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = -2
Query:  369 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK-----KHLGLDGSIATNHQTSPK 707
            V    D G    L+I+VQGA  VK    DA+FIF+ PP ++EL++RL  RGT++ + I +R+  AKEEI   +    +D+ + ND++    E +K     +H  +D  I    +  PK
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKKKVPDAVFIFLTPPDLDELQDRLVGRGTDSAEVIAQRIEKAKEEIALMRE---YDYAIVNDQVPLAAERVKCVIEAEHFCVDRVIGHYQEMLPK 203          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRPM (Guanylate kinase OS=Streptococcus pyogenes serotype M28 GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRPF (Guanylate kinase OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRPD (Guanylate kinase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRPC (Guanylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRPB (Guanylate kinase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRP8 (Guanylate kinase OS=Streptococcus pyogenes serotype M18 GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRP6 (Guanylate kinase OS=Streptococcus pyogenes serotype M6 GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_PROMA3.529e-1243.82Guanylate kinase OS=Prochlorococcus marinus GN=gmk... [more]
KGUA_DECAR3.529e-1243.82Guanylate kinase OS=Dechloromonas aromatica (strai... [more]
KGUA_STRPN4.609e-1235.59Guanylate kinase OS=Streptococcus pneumoniae GN=gm... [more]
KGUA_STRPM4.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPF4.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPD4.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPC4.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRPB4.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP84.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP64.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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