CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRP3 (Guanylate kinase OS=Streptococcus pyogenes serotype M3 GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRP1 (Guanylate kinase OS=Streptococcus pyogenes serotype M1 GN=gmk PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  420 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKK 707
            V    D G    L+I+VQGA  VK+   D +F+F+ PP ++ELE+RL  RGT++++ I +R+  AKEEI   +    +D+ + ND++    E +K+
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKSKVPDGVFVFLTPPDLDELEDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVALAAERVKR 181          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_RICBR (Guanylate kinase OS=Rickettsia bellii (strain RML369-C) GN=gmk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = -2
Query:  426 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 707
            VE + + G   + DID QGARS+K + ++A+ IFI PP++E LE+RLR R  + E+ I  R+ +A+ EI     S  +DHI+ ND   +  + +
Sbjct:   89 VENLLNQGLDVLFDIDWQGARSIKQNAVNAVSIFILPPNLEVLEQRLRNRAADNEEAIQLRMASAQAEISH---SNEYDHIITNDDFNDTIQQI 179          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CHRSD (Guanylate kinase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gmk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12
Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = -2
Query:  426 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 710
            AV+A+ DAG+  IL+ID QGAR V+ +  +A+ IFI PPS E L  RL  RGT+    I +R+R+A +E+        ++H++ ND  +   + L
Sbjct:   91 AVQALLDAGQDVILEIDWQGARQVREAFDEAVSIFILPPSREALHARLAGRGTDDAATIARRMRDAVDEMSHYDE---YEHVIINDTFDHALDEL 182          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_THET8 (Guanylate kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gmk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = -2
Query:  441 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEE 707
            VE     G+  +L+I+VQGA  VK +  +A+ IF+ PPS+ EL+ RL  RG ++ ++I KRL  A+ EI   +++ +FD+++ ND LEE
Sbjct:   88 VERALSRGEDVLLEIEVQGALQVKRAVPEAVLIFLLPPSLSELKRRLVYRGKDSPEKIQKRLEQAEWEI---RNAHLFDYVVVNDVLEE 173          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_THET2 (Guanylate kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gmk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = -2
Query:  441 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEE 707
            VE     G+  +L+I+VQGA  VK +  +A+ IF+ PPS+ EL+ RL  RG ++ ++I KRL  A+ EI   +++ +FD+++ ND LEE
Sbjct:   85 VERALSRGEDVLLEIEVQGALQVKRAVPEAVLIFLLPPSLSELKRRLVYRGKDSPEKIQKRLEQAEWEI---RNAHLFDYVVVNDVLEE 170          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_STRMU (Guanylate kinase OS=Streptococcus mutans GN=gmk PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12
Identity = 41/123 (33.33%), Postives = 68/123 (55.28%), Query Frame = -2
Query:  354 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK-----KHLGLDGSIATNHQTSPKGIDLP 707
            V    D G    L+I+VQGA  VK    D +FIF+ PP + EL++RL  RGT++++ I +R+  AKEEI   +    +D+ + ND+++   E +K     +H  ++  I   H+   + + LP
Sbjct:   89 VNETLDKGIDVFLEIEVQGALQVKQKVPDGVFIFLTPPDLAELKDRLVGRGTDSQEVIAQRIERAKEEIALMRE---YDYAVVNDEVKLAAERVKHIIETEHFRVERVIGRYHKMINEELPLP 208          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_NOCFA (Guanylate kinase OS=Nocardia farcinica GN=gmk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = -2
Query:  426 EAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 704
            EA+A AGK  +L++D++GARSV+    +A  +F+ PPS +EL  RL ARGTET + I +RL  A+ E+    +   FD+++ ND++    E L
Sbjct:   95 EALA-AGKNVLLEVDLEGARSVRKVMPEARLVFLAPPSWDELVARLTARGTETPEVIARRLETARIEL---AACDEFDNVIVNDEVTSACEQL 183          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_GLOVI (Guanylate kinase OS=Gloeobacter violaceus GN=gmk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 40/91 (43.96%), Postives = 57/91 (62.64%), Query Frame = -2
Query:  414 GKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLKKHL 686
            G+  +L+IDVQGA  VK +   A+ +FI PPS+E L ERLR+RGT+  + I +RL  A+EE+        FDH + NDKL    E +++ L
Sbjct:  107 GEPVVLEIDVQGALQVKNNFPAAMLVFIRPPSLEVLAERLRSRGTDAPEAIERRLARAREELALADR---FDHQVVNDKLAAAVEAVERLL 194          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CLOD6 (Guanylate kinase OS=Clostridium difficile (strain 630) GN=gmk PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11
Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = -2
Query:  444 AVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 710
            A+    + G+  +L+I++QGA+ +K    + +FIF+ PPS+EEL+ R+  RGTETE +I KR   A EEIK  K    +D+ ++N+ ++
Sbjct:   88 AIMECLEKGQDVLLEIEMQGAKQIKEVCPEGVFIFVLPPSLEELKNRIVGRGTETEAEIEKRFSCAYEEIKMIKD---YDYFIFNEDVK 173          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_STRP34.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_STRP14.609e-1237.50Guanylate kinase OS=Streptococcus pyogenes serotyp... [more]
KGUA_RICBR6.019e-1239.36Guanylate kinase OS=Rickettsia bellii (strain RML3... [more]
KGUA_CHRSD6.019e-1240.00Guanylate kinase OS=Chromohalobacter salexigens (s... [more]
KGUA_THET87.861e-1241.57Guanylate kinase OS=Thermus thermophilus (strain H... [more]
KGUA_THET27.861e-1241.57Guanylate kinase OS=Thermus thermophilus (strain H... [more]
KGUA_STRMU7.861e-1233.33Guanylate kinase OS=Streptococcus mutans GN=gmk PE... [more]
KGUA_NOCFA1.027e-1141.94Guanylate kinase OS=Nocardia farcinica GN=gmk PE=3... [more]
KGUA_GLOVI1.027e-1143.96Guanylate kinase OS=Gloeobacter violaceus GN=gmk P... [more]
KGUA_CLOD61.027e-1139.33Guanylate kinase OS=Clostridium difficile (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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