CN189113

Overview
NameCN189113
Unique NameCN189113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:724..1440. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_LACS1 (Guanylate kinase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=gmk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 35/95 (36.84%), Postives = 60/95 (63.16%), Query Frame = -2
Query:  423 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 707
            V  + D+GK   L+I+V+GA  V+    D +FIF+ PP + EL +R+  RGT+  D I KR++ A +EI+  ++   +D+ + ND++E+  E +K
Sbjct:   89 VNEMLDSGKDVFLEIEVKGAMQVREKAPDGLFIFLTPPDLMELRQRIINRGTDDIDTINKRMKKAVDEIEMMQN---YDYAVVNDEVEKAAEKIK 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_CLOAB (Guanylate kinase OS=Clostridium acetobutylicum GN=gmk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = -2
Query:  444 DAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLE 692
            D G+  IL+ID+QGA  VK +  + +FIFI PPSMEEL++R+  RG+ETE  ++ R ++A +EI        +++ + ND +E
Sbjct:   92 DNGENVILEIDIQGALKVKENYPEGVFIFILPPSMEELKKRIIGRGSETEKSLMTRFKSAYKEINYVSK---YNYAIINDTVE 171          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_BACSU (Guanylate kinase OS=Bacillus subtilis GN=gmk PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.341e-11
Identity = 37/98 (37.76%), Postives = 59/98 (60.20%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            V+ VE     GK   L+I+VQGA  V+ +  + +FIF+ PPS+ EL+ R+  RGTET+  I  R++ AK EI+       +D+++ ND +E   + +K
Sbjct:   86 VDYVEQTLQDGKDVFLEIEVQGALQVRNAFPEGLFIFLAPPSLSELKNRIVTRGTETDALIENRMKAAKAEIEM---MDAYDYVVENDNVETACDKIK 180          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_METFK (Guanylate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gmk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = -2
Query:  423 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 707
            V +    G   IL+ID QGA+ V++   DAI IFI PPSME LE+RL  R  ++ + I +RL  A+EE++       FD++  ND+ E   E+L+
Sbjct:   86 VNSALAEGYDLILEIDWQGAQQVRSLYADAISIFILPPSMEALEQRLNNRAQDSAEVIARRLAAAREEMRHVTE---FDYVTINDRFEHALEDLR 177          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_GEOSL (Guanylate kinase OS=Geobacter sulfurreducens GN=gmk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            +  +E    AG   ILDID+QGAR ++      ++IFI PPS EEL  RL  R +++++ I +R+  A  EI++   S  +D+I+ ND+     E LK
Sbjct:   85 IRTLEENRAAGVDLILDIDIQGARQLQERFAGGVYIFILPPSFEELRRRLNGRSSDSDEVISRRINAAAGEIRE---SRWYDYIIVNDQFSRAVEELK 179          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_GEOMG (Guanylate kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=gmk PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11
Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = -2
Query:  423 VEAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENLK 716
            +  +E     G   ILDID+QGAR +K      ++IFI PPS EEL  RL  R ++++D I +R+  A  EI++   S  +D+I+ ND+     E LK
Sbjct:   85 IRTLEECRITGIDLILDIDIQGARQLKERYEGGVYIFILPPSYEELRRRLNGRSSDSDDVISRRIDAAAGEIRE---SRWYDYIIVNDQFSRAVEELK 179          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_THICR (Guanylate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=gmk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = -2
Query:  426 VEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 707
            VE+     K  IL+ID QGA+ V+    DA+ +FI PPS++ELE+RLR RGT++ED I +R+ +A  E+K       FD+++ N+  +     L
Sbjct:   86 VESKLAEDKDVILEIDWQGAQQVRKLIPDAVSVFILPPSLKELEKRLRGRGTDSEDVIERRMSDAVNEMKHFNE---FDYLVINNHFDTALSEL 176          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_MYCLE (Guanylate kinase OS=Mycobacterium leprae GN=gmk PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = -2
Query:  426 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 713
            E V   A AG   ++++D+ GAR+VK +  +AI +F+ PPS E+LE RL  RGTET + I +RL  A+ E+    +   FD ++ N +LE     L
Sbjct:  106 EPVRVAAAAGFPVLIEVDLAGARAVKKAMPEAIAVFLAPPSWEDLEARLVGRGTETPEAIRRRLETARIEL---AAQDDFDEVVVNRRLESACAEL 198          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_DEIRA (Guanylate kinase OS=Deinococcus radiodurans GN=gmk PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 38/98 (38.78%), Postives = 58/98 (59.18%), Query Frame = -2
Query:  426 VEAVEAVADAGKRCILDIDVQGARSVKASPLD-AIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 716
            +E +EA  + G+  +L+I+V+GA  VK    + AI +FI PPS+ EL  RL  R TET ++I KRL  A++EI+       F +++ ND L+     L
Sbjct:   98 IEPIEAALERGQDVVLEIEVEGAMQVKDRMGEQAILVFIMPPSLTELRRRLTGRATETPERIEKRLTRARDEIQAAHD---FRYVIVNDNLDRAVSEL 192          
BLAST of CN189113 vs. ExPASy Swiss-Prot
Match: KGUA_RICFE (Guanylate kinase OS=Rickettsia felis GN=gmk PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11
Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = -2
Query:  426 EAVEAVADAGKRCILDIDVQGARSVKASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIKQGKSSGIFDHILYNDKLEECYENL 713
            E VE + + G   + DID QGA+S+K +  + + IFI PPS+E LE+RLR R T+ E+ I  R+++A+ E+        +D+++ ND  ++  + +
Sbjct:   88 EYVEMLLNQGLDVLFDIDWQGAKSIKKNATNVVAIFILPPSIEILEQRLRNRATDNEEAIKLRMQSAQNEMSHANE---YDYVITNDDFDQTLKKI 180          
The following BLAST results are available for this feature:
BLAST of CN189113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
KGUA_LACS11.341e-1136.84Guanylate kinase OS=Lactobacillus salivarius subsp... [more]
KGUA_CLOAB1.341e-1142.17Guanylate kinase OS=Clostridium acetobutylicum GN=... [more]
KGUA_BACSU1.341e-1137.76Guanylate kinase OS=Bacillus subtilis GN=gmk PE=3 ... [more]
KGUA_METFK1.751e-1141.05Guanylate kinase OS=Methylobacillus flagellatus (s... [more]
KGUA_GEOSL1.751e-1137.76Guanylate kinase OS=Geobacter sulfurreducens GN=gm... [more]
KGUA_GEOMG1.751e-1138.78Guanylate kinase OS=Geobacter metallireducens (str... [more]
KGUA_THICR2.287e-1140.43Guanylate kinase OS=Thiomicrospira crunogena (stra... [more]
KGUA_MYCLE2.287e-1139.58Guanylate kinase OS=Mycobacterium leprae GN=gmk PE... [more]
KGUA_DEIRA2.287e-1138.78Guanylate kinase OS=Deinococcus radiodurans GN=gmk... [more]
KGUA_RICFE2.987e-1135.42Guanylate kinase OS=Rickettsia felis GN=gmk PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189113 ID=CN189113; Name=CN189113; organism=Citrus sinensis; type=EST; length=717bp
TTTTTTGAGTGAAAATTGAATAAATTGAATGTCGTAGTCTTACGAAATCA
CAGGTAGAGCTTCATCAAGGCTCTTTTTTTCTAAATTATATAAGTTGAGC
TTCGAGAAATATTTTAAATGAGAAACCACGTTAGCGTCGATGAGGATGGG
AGCTATTAGCTCAACTTATTGACCCCATTTAAACCATCAGAAAATGAATC
AACTGTATAAACTTGGAGCCCTCTAGTCCGTCCAGGTGCTCCGCCTTTCA
GTGAGGATACATCCAAAACCATTAAGTTCTTTGATGCTTTTCCTTCAGCA
GCCCCACACTTTATGATGACTTTGTTAGCAACTTTTGATACTGAATGATC
AGCTGGCAAATCAATCCCTTTGGGTGAGGTTTGATGGTTGGTAGCAATAC
TCCCATCAAGTCCCAAGTGTTTCTTAAGGTTCTCGTAACACTCTTCAAGT
TTATCATTGTACAATATATGATCAAAGATGCCAGAGGATTTCCCTTGCTT
AATCTCTTCCTTGGCATTTCGGAGTCGTTTTAGGATCTGATCCTCTGTCT
CAGTTCCTCTTGCACGGAGGCGCTCCTCAAGCTCCTCCATTGAAGGTGGA
CAGATAAATATGAAAATAGCATCAAGAGGACTCGCCTTCACAGACCTCGC
CCCTTGAACATCAATATCAAGTATGCATCTCTTTCCAGCATCTGCTACTG
CCTCCACAGCTTCAACA
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