CN189109

Overview
NameCN189109
Unique NameCN189109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:77..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.214e-57
Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +V+FD+ + G+PAGRIVM LF    P+TAENFRALCTGEKG G+SGKPLHYK S+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG+V+ GMDVV  +E  G  +G    KVVV D G+L
Sbjct:    5 RVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQL 171          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.214e-57
Identity = 108/167 (64.67%), Postives = 121/167 (72.46%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            KV+FDV I  +PAGR+ M LF   VPKTAENFRALCTGEKG+G+ G  LH+KGS FHRIIP FM+Q            ESIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFI TV T WLDG HVVFG+V  GM VV K+E  G ++G P   V +AD GEL
Sbjct:   23 KVFFDVSIGEEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSGAPAKTVTIADCGEL 189          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.533e-57
Identity = 106/167 (63.47%), Postives = 123/167 (73.65%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            KV+FD+ IAG PAGRIVM L+    P+TAENFRALCTGEKG+G+SGKPLHYKGSTFHR+IP+FM Q            ESIYG KF DENF  +HTGPG+LSMANAG  TNGSQFFI T  T WLDG+HVVFGKV+ GM+VV  +E  G  +G     V +AD G+L
Sbjct:    5 KVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQL 171          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 6.027e-57
Identity = 107/170 (62.94%), Postives = 122/170 (71.76%), Query Frame = 3
Query:  102 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +  KVYFD+ +  K AGRIVM L+   VP+TAENFRALCTGE+GIGKSGKPLHYKGS FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSM NAG +TNGSQFFI T  TSWLDG+HVVFG+V+ GMDVV  +E  G  +G    KVV  D G+L
Sbjct:    2 VNPKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.754e-56
Identity = 102/168 (60.71%), Postives = 127/168 (75.60%), Query Frame = 3
Query:  108 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +KV+FD+ I    AGRIVM LF +  PKTAENFRALCTGEKG+GK+GKPLH+KGS FHR+I  FM Q            ESIYGEKF DENF+LKH  PGLLSMANAGP+TNGSQFF+T V   WLDG+HVVFG+V+ G++++ ++EA G Q+G  K  +V++D GE+
Sbjct:    3 SKVFFDITIGSDTAGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSGQTKQAIVISDCGEI 170          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.754e-56
Identity = 104/167 (62.28%), Postives = 123/167 (73.65%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            KVYFD+ + GK AGRIVM L+    P+TAENFRALCTGE+GIGK GKPLHYKGS+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAG +TNGSQFFI T  TSWLDG+HVVFG+V+ G++VV  +E  G  +G     VV+AD G++
Sbjct:    6 KVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQI 172          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 2.991e-56
Identity = 106/167 (63.47%), Postives = 120/167 (71.86%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            KV+FD+ I    AGR+VM LF    P+TA NFRALCTGE GIGK+GK LHYKGS FHRIIP FM Q            ESIYG KF DENFKLKHTGPG+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFGKV+ G +VV  +E  G   G P  +VV+ D GEL
Sbjct:    5 KVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 6.664e-56
Identity = 108/177 (61.02%), Postives = 126/177 (71.19%), Query Frame = 3
Query:   81 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            S  ++K+  ++V+FD+ I GK AGRIV  L+   VPKTAENFRALCTGEKG+GK GKPLHYKGSTFHR+I  FM+Q            ESIYG KF DENF+LKH  P LLSMANAGP TNGSQFF+TTV T  LDG+HVVFG+VLSG  VV ++E    Q   P    V+AD GEL
Sbjct:    3 STDDVKQARSRVFFDITIGGKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGEL 179          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.641e-55
Identity = 105/167 (62.87%), Postives = 121/167 (72.46%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +V+FD+ I G  AG++VM L+   VPKTAENFRALCTGEKGIGKSGKPL YKGS+FHR+I +FM Q            ESIYG KF DENFKLKH G G LSMANAG +TNGSQFFI    T WLDG+HVVFG V  GMDVV K+EA G Q+G     VV+A+ G+L
Sbjct:   13 RVFFDITIGGVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSGKTTKPVVIANCGQL 179          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.641e-55
Identity = 104/167 (62.28%), Postives = 119/167 (71.26%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            KV+FDV + GKP+GR+   LF   VPKTAENFRALCTGEKG G SGKPLHYKGS FHRIIP FM Q            ESIYG KF DENF LKHTG G+LSMANAGP+TNGSQFFIT   T WLDG H VFG+++ G  V+  +E  G Q+G P +KV + D GE+
Sbjct:    8 KVFFDVAVNGKPSGRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQLVEGNQVLEILEQHGTQSGMPTAKVEIVDCGEI 174          
The following BLAST results are available for this feature:
BLAST of CN189109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYPH_CATRO1.214e-5763.47Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYP1_CAEEL1.214e-5764.67Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CYPH_LUPLU3.533e-5763.47Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPH_BRANA6.027e-5762.94Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
PPI2_SYNY31.754e-5660.71Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CP19A_ARATH1.754e-5662.28Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CP19C_ARATH2.991e-5663.47Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPID_NEUCR6.664e-5661.0241 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIA_DICDI5.641e-5562.87Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
CYP5_RHIOR5.641e-5562.28Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189109 ID=CN189109; Name=CN189109; organism=Citrus sinensis; type=EST; length=613bp
GCTTCGACAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTG
GCCACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGA
AATCACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCG
GACGTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAA
AATTTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAA
GCCACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTA
TGCTTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCA
ATTTATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGG
CCCAGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCAC
AATTCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTT
GTATTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGC
TGAAGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCGTTGCGGACA
GCGGTGAACTTCC
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