CN189109

Overview
NameCN189109
Unique NameCN189109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.329e-47
Identity = 102/198 (51.52%), Postives = 123/198 (62.12%), Query Frame = 3
Query:   21 LTMLWAIVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVVADSGEL 611
            L ++  + L A   S  A    +    +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV+ +E +    +  P +   + +SG++
Sbjct:    9 LPLVLCVGLSALVPSAGASGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSIVNSGKI 199          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.329e-47
Identity = 95/178 (53.37%), Postives = 119/178 (66.85%), Query Frame = 3
Query:   81 SDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGEL 611
            S+ N  ++T KV+FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q             SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VV ++E  +      P   V +A+ G +
Sbjct:   23 SEGNGPKVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCGHI 198          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.329e-47
Identity = 100/172 (58.14%), Postives = 115/172 (66.86%), Query Frame = 3
Query:  102 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +T KVYFD+ I   PAGRI   LF   VPKTAENFRAL TGEKG G       Y GS+FHR+I  FMLQ            +SIYGEKF DENF+LKH   GLLSMANAG +TNGSQFFITTV T WLDG+HVVFG+V     M +V K+EA G  +G   +KV +A+SG L
Sbjct:    1 MTTKVYFDITIDDAPAGRITFNLFDDVVPKTAENFRALATGEKGFG-------YAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEVADDDSMALVRKIEALGSSSGRTSAKVTIAESGAL 165          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.654e-47
Identity = 97/169 (57.40%), Postives = 116/169 (68.64%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGEL 611
            KV+FD+   GKP GR+V  L+   VPKTAENFRALCTGEKG  +S GK LHYKGS FHRII  FM Q            ESIYGEKF DENF+L H  P LLSMANAG +TNGSQFFITTV T  L+G+HVVFG+V+ G  +V ++E  +  +N  P    +++D GEL
Sbjct:    9 KVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVEDWIISDCGEL 177          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.385e-47
Identity = 96/171 (56.14%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  102 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVVADSGEL 611
            +T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKV+ GM VV+ +E +    +  P +   + +SG++
Sbjct:   36 VTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKI 199          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.149e-46
Identity = 94/170 (55.29%), Postives = 115/170 (67.65%), Query Frame = 3
Query:  108 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGEL 611
            +K + D+ I G+  GRIV+ L+   VPKTAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM+Q            ESIYG KF DENF+LKH   G+LSMAN+GP+TNGSQFFITT  TS LDG+HVVFG+V  GM VV  +E     +   P   VV+ D GE+
Sbjct:    4 SKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.819e-45
Identity = 98/171 (57.31%), Postives = 114/171 (66.67%), Query Frame = 3
Query:  114 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX---ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGEL 611
            VYFD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM Q               ESIYGEKF DENFKL H  P LLSMAN+GP+TNGSQFFITTV T  LDG+HVVFG+V+ G  +V ++E +E   N  P     +AD GEL
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCGEL 176          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.052e-45
Identity = 98/172 (56.98%), Postives = 114/172 (66.28%), Query Frame = 3
Query:  102 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKVVVADSGEL 611
            I  +V+FD+++ G   GRIV+ LF   VPKTAENFRALCTGEKGIGK S  PLHYKGS FHRII  FM Q            ESIYG  FPDE+F  KH   GLLSMAN GP+T  SQFFITT  T  LDG+HVVFG+V+SG +VV  +E E       P   V++A+ GEL
Sbjct:    2 INPRVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGEL 173          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.027e-45
Identity = 92/167 (55.09%), Postives = 110/167 (65.87%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +V+FD+ I G  AGRIVM L    VPKTAENFR LCT E+G G       YKG +FHR+IP FM Q            +SIYG+KF DENF LKH   G LSMAN+G +TNGSQFFI T  T WLD +HVVFG V+SG +VV K+E  G ++GTP  K+V+   GEL
Sbjct:  140 QVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGEL 299          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 1.540e-44
Identity = 92/182 (50.55%), Postives = 118/182 (64.84%), Query Frame = 3
Query:   66 IQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            ++ KK  +NL     +V+FD+ I    AGRIVM L    VP+TAENFRALCTGE+G G       Y    FHR+IP FM Q            +SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+ G +VV K+E+ G ++G  K  V+++  GEL
Sbjct:  102 MRTKKQKRNLP----RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGEL 272          
The following BLAST results are available for this feature:
BLAST of CN189109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIC_BOVIN4.329e-4751.52Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
PPIB_SCHJA4.329e-4753.37Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIA_STRCH4.329e-4758.14Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPID_DEBHA5.654e-4757.40Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIC_HUMAN7.385e-4756.14Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
CYP40_ARATH2.149e-4655.29Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPID_CANAL1.819e-4557.31Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CYP11_RHIOR4.052e-4556.98Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIE_DROME9.027e-4555.09Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIE_SCHMA1.540e-4450.55Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189109 ID=CN189109; Name=CN189109; organism=Citrus sinensis; type=EST; length=613bp
GCTTCGACAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTG
GCCACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGA
AATCACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCG
GACGTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAA
AATTTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAA
GCCACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTA
TGCTTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCA
ATTTATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGG
CCCAGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCAC
AATTCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTT
GTATTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGC
TGAAGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCGTTGCGGACA
GCGGTGAACTTCC
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