CN189109

Overview
NameCN189109
Unique NameCN189109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 2.633e-36
Identity = 81/177 (45.76%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   93 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG---MDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            +  +  +V+ D+ +  KP GRI + LF    PKT ENFRALCTGE G+  + K  LHYKG+  HR++  FM+Q             SIYG  F DE F LKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G   +DV+  +E +G+    P +KV + +SGEL
Sbjct:    1 MSSLEKRVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSK--PIAKVRIFNSGEL 175          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35
Identity = 85/168 (50.60%), Postives = 100/168 (59.52%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            K + D+EI G+ AGRIV+ L G  VPKT +NF         IG   K   YKGSTFHR+I  FM+Q             SIYG +F DENF LKH   G++SMANAGP+TNGSQFFITTV T WLDGRHVVFGK+ +     V  +EA G   G P     + D G L
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIGLL 178          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.911e-35
Identity = 84/182 (46.15%), Postives = 112/182 (61.54%), Query Frame = 3
Query:   75 KKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYG-EKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSKVVVADSGEL 611
            KKS+Q  + +   V+FD+ I   P GR+ M LF   VP+TAENFR LCTGE    ++G P  YK   FHR+I  FM+Q              IYG ++F DENF  KHTG GLLSMAN+GP++NG QFFIT     +LDG+HVVFG+++ G+  + K+E  A G  N  PK  V + + G++
Sbjct:    3 KKSNQVERPV---VFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATG-PNNRPKLPVKITECGQM 178          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.887e-34
Identity = 79/169 (46.75%), Postives = 103/169 (60.95%), Query Frame = 3
Query:  111 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVV-YKVEAEGRQNGTPKSKVVVADSGEL 611
            +V+ D+ +     GRI + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM+Q             SIYG  F DE FKLKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G +VV Y           P +KV++++ GEL
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGEL 174          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.597e-33
Identity = 79/157 (50.32%), Postives = 93/157 (59.24%), Query Frame = 3
Query:  144 PAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGEL 611
            PAGR+   LF   VP+T+ENFR LCTGE     +  P  YK S FHRII  FM Q             SIYG+KF DENF LKH   GLLSMAN+GP TNG QFFIT     +LDG+HVVFGKV+ G+  + K+E      N  PK  V +   GE+
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQCGEM 156          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.934e-32
Identity = 67/168 (39.88%), Postives = 97/168 (57.74%), Query Frame = 3
Query:  108 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGEL 611
            N V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  +SG  LHY GS FHR++ +  +Q            ESIYG  F DENF + H   G+L M N G  +NGSQF+IT     +LD ++V FG+++ G DV++ +E+   +N  P    V+  SG+L
Sbjct:  138 NFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERPIQNCVITASGQL 305          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.330e-31
Identity = 73/197 (37.06%), Postives = 106/197 (53.81%), Query Frame = 3
Query:   30 LWAIVLLATFSSIQAKKSDQNLKEITNK----VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 608
            +W IV +   +   A   D + K + +     V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  + G  LHYK S FHRI+ +  +Q            ESIYG  F DENF + H   G+L MAN G  +NGSQF+IT   T +LD + V FG+++ G +V+ ++E    QN  P     + DSG+
Sbjct:  112 VWDIVDIKPSALYDALTEDFSAKFLRDTKHDFVFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSGD 308          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.502e-26
Identity = 67/135 (49.63%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  150 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 551
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G TFHR+I  FM+Q                G +FPDE +  L+H  PG+LSMANAGP TNGSQFFIT V T WLDG+H VFGKV+ GM+VV+ + A
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIA 177          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.186e-26
Identity = 68/160 (42.50%), Postives = 90/160 (56.25%), Query Frame = 3
Query:  150 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYK---VEAEGRQNGTPKSKVV---VADSGE 608
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFF+T   T WLDG+H +FG+V SGM V+ +   V+  G      + K++   V + GE
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKIIRARVVEEGE 160          
BLAST of CN189109 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.566e-25
Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  150 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 545
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V SGM ++ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRM 133          
The following BLAST results are available for this feature:
BLAST of CN189109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYP9_CAEBR2.633e-3645.76Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_NEOCA1.706e-3550.60Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIH_RHIOR2.911e-3546.15Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYP9_CAEEL1.887e-3446.75Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIH_USTMA1.597e-3350.32Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPIL6_BOVIN3.934e-3239.88Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN3.330e-3137.06Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIB_TREPA5.502e-2649.63Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_ASPOR7.186e-2642.50Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI3.566e-2546.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F09_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189109 ID=CN189109; Name=CN189109; organism=Citrus sinensis; type=EST; length=613bp
GCTTCGACAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTG
GCCACTTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGA
AATCACAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCG
GACGTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAA
AATTTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAA
GCCACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTA
TGCTTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCA
ATTTATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGG
CCCAGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCAC
AATTCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTT
GTATTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGC
TGAAGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCGTTGCGGACA
GCGGTGAACTTCC
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