CN182560

Overview
NameCN182560
Unique NameCN182560
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
[Close]
BLAST of CN182560 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 9.093e-42
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = -1 
Query:  232 GDFTAGNGTGGESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 531
            GDFT  NGTGG+SIYG KF DENF+ KHTGPGILSMANAGP TNGSQFF+CTAKTEWLDGKHVVFG+V EGM++V+A+E+ GS +G+T+K + IADCGQL
Sbjct:   65 GDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164
The following BLAST results are available for this feature:
BLAST of CN182560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PPIA_PONPY9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO9.093e-4276.00Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002K16_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002K16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182560 ID=CN182560; Name=CN182560; organism=Citrus sinensis; type=EST; length=531bp
GAGGCCTATCTTATTTAAAAAGGCAGCTCATAGAAAGACATAAAAAACAG
TTCATCAAGAACCACCACCGGAGACCCGATCCAACCCGAACAAGTAACAT
AGCAGGAAAATTAGATAAAGATTAAAAGTCCTACAGACACGGCCACATAA
TAATAGATAACATAATCACCATCACGATCGCGATCAGACGGCTCGTGATG
ATGGCGATCATTATCATGATCAAATCTAAGACAATTGACCGCAATCAGCG
ATCACGACGGGCTTGTTGGTCCTTCCGGAGCTGGACCCCACTTTCTCGAT
GGCCTTGACGACGTCCATTCCTTCGACGACTTGACCGAACACAACGTGCT
TCCCATCGAGCCACTCGGTCTTGGCCGTACAGACGAAGAACTGAGATCCG
TTGGTTCCGGGTCCGGCATTCGCCATGGAGAGGATTCCGGGGCCGGTGTG
CTTCTTCACGAAGTTCTCATCGGCGAATTTTGAGCCGTAGATTGATTCGC
CTCCGGTTCCGTTTCCGGCGGTGAAGTCTCC
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