CN182558
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECK 372 +++P+RVFKN+ G+ +P ++PM++ SLWN ++WAT GG K +WS APF A+++GF+ GC + C + WW+ ++ L + + VRQKY Y+YC+D+ RF P ECK Sbjct: 171 DNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGSSA-YWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSECK 292
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.094e-24 Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEV---SVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPEC 369 +++PIRV+KN GV +P ++PM++ +SLWN DDWAT GG K +WS +PFIA ++ F + GC + S N CE+ WW+ +Q L + + VR KY Y+YC DR+++ TP EC Sbjct: 168 DNIPIRVYKNEN--GVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACES-SNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.632e-23 Identity = 52/130 (40.00%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGC--EVSVNAKFC--ETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFP-TPSPECKR 375 + PIRVF+N + G+ +P Q MK+++SLWNA+DWAT+GG KT+W+ APF+A + + C + SV+ K C T WW +F L A Q +++ +R + IY+YC D RF PEC + Sbjct: 160 DGTPIRVFRNYESEGIAYPNKQGMKVFASLWNAEDWATQGGRVKTNWTLAPFVAEGRRYKARACLWKGSVSIKQCVDPTIRSNWWTSPSFSQLTASQLTKMQKIRDGFMIYDYCKDTNRFKGVMPPECSK 289
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.444e-19 Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEV----------SVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPEC 369 +DVPIR + +G +P +PM +Y+++W+A DWAT GG K ++ APF+A +K F +DGC V S + F E+Q + ++++Q +R RQ++ Y+YC D R+P P PEC Sbjct: 170 DDVPIREVIRNDAMGADYPA-KPMALYATIWDASDWATSGGKYKANYKFAPFVAEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQD--------YSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPLPEC 293
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.198e-18 Identity = 49/132 (37.12%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVN------AKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSP-ECKR 375 +DVP+R FK DL +P ++PM+++++LW+ WATR G K DWS APF+ SY+G+ + C V+ N + +C W ++LD + + W + Y YNYC D RFP P EC R Sbjct: 165 DDVPVRTFKKYDDLA--YPQSKPMRLHATLWDGSYWATRHGDVKIDWSGAPFVVSYRGYSTNAC-VNNNPAGGWSSSWCPEGTSAW----IHRELDGAELGTVAWAERNYMSYNYCADGWRFPQGFPAECYR 289
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16 Identity = 45/123 (36.59%), Postives = 65/123 (52.85%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPEC 369 +DVPIR + N K+ + FP +PM +Y S+W+A DWAT G K D+ PF+A YK F + GC ++ C + L Q L W ++ + +YNYC+D R T +PEC Sbjct: 178 DDVPIRTY-NRKNEAI-FP-TRPMWVYGSIWDASDWATENGRIKADYRYQPFVAKYKNFKLAGCTAD-SSSSCRPPSPAPMRNRG---LSRQQMAALTWAQRNFLVYNYCHDPKRDHTQTPEC 293
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14 Identity = 39/123 (31.71%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPEC 369 ++VPIR K + ++G FP ++PM +Y+++W+ WAT GG ++ AP+IA + + GC V +F D +A Q++ Q ++ R++ Y+YC DRAR+ EC Sbjct: 169 DNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWATNGGKYGVNYKYAPYIARFSDLVLHGCPVDPIEQFPRCDEGAAEDMRAAQEITPSQRSKMDVFRRRLMTYSYCYDRARYNVALSEC 290
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.241e-14 Identity = 40/137 (29.20%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVS--------------VNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPEC 369 +DVPIR +++ +P +PM +Y+++W+A WAT GG D++ +PF++ +K +DGC VS N C ++ + + Q +R R++Y Y+YC D R+ P PEC Sbjct: 178 DDVPIREILRKEEMNGDYP-QKPMSLYATIWDASSWATSGGKFGVDYTFSPFVSEFKDIALDGCNVSDSFPGENNNNNIGNYNNINCSV-SDQFLMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPPPEC 312
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.372e-13 Identity = 36/123 (29.27%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPEC 369 ++VPIR K + +G FP +PM +YS++W+ WAT GG ++ AP+++ + + GC V KF + + + + ++ Q ++ RQK+ Y+YC D R+ EC Sbjct: 169 DNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATDGGKYGVNYKYAPYVSQFTDLILHGCAVDPTEKFPSCKDEAVQNLRLASEITESQRNKMEIFRQKHMTYSYCYDHMRYKVVLSEC 290
BLAST of CN182558 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.284e-13 Identity = 42/125 (33.60%), Postives = 60/125 (48.00%), Query Frame = 1 Query: 1 EDVPIRVFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKAPFIASYKGFHVDGCEVSVNAKFCETQGKRWWDQKAFQDLDAYQYRRLRWVRQKYTIYNYCNDRARFPTPSPECKR 375 +D+PIR + K FP +PM +Y S+W+A WAT G K D+ PF A Y F GC +A+ + L Q++ +RWV+ +YNYC D R + +PEC R Sbjct: 182 DDIPIRRYP--KKSASTFPL-RPMWLYGSIWDASSWATEDGKYKADYKYQPFTAKYTNFKALGCTAYSSARCYPLSASPY----RSGGLTRQQHQAMRWVQTHSMVYNYCKDYKRDHSLTPECWR 299 The following BLAST results are available for this feature:
BLAST of CN182558 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CN182558 ID=CN182558; Name=CN182558; organism=Citrus sinensis; type=EST; length=606bpback to top |