CN182542

Overview
NameCN182542
Unique NameCN182542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH6_YEAST (NADP-dependent alcohol dehydrogenase 6 OS=Saccharomyces cerevisiae GN=ADH6 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.189e-36
Identity = 80/198 (40.40%), Postives = 111/198 (56.06%), Query Frame = 3
Query:  162 DVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVG-NNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVS 752
            D+ IKI  CG+C SD+HCA   WG    P+V GHEIVG V K+G  + S  K G +VGVG  V SC +C+ C+   E YC   + TY+    DG  + GGY++ + V +H+V+  P+N+P    APLLC G+TVYSP+   G   P                  I KA G +  VIS S +K  +A+ K+GAD ++ +
Sbjct:   35 DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNG-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIAT 230          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: YL498_MIMIV (Probable zinc-type alcohol dehydrogenase-like protein L498 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L498 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.134e-33
Identity = 80/243 (32.92%), Postives = 127/243 (52.26%), Query Frame = 3
Query:   54 KSPETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILT-YNSIDR-------DGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD 758
            KSP+      A+G+   D         F R++   ++V+I+I + GICHSD H    EW   ++P++PGHE++G V  +G NV K+  GD V V  ++ SC  C+ C   +E +C N     YN   R        G  TYGGYS+++++ QH+V +FP N+ ++  APL+CAG T YSP++      P                  I KA G  V  I+ +  K  ++++ LGA+  ++S++
Sbjct:   64 KSPDK---MTALGFGVTDVGKPVELLVFDRKKPTNNEVSIEIYYTGICHSDWHFIVGEWKA-DFPLIPGHELIGRVIDIGPNVDKYSIGDIVCVSPVIDSCGHCKMCTHHIEQHCMNGATEIYNQKTRLPGDIKPSGPITYGGYSNIVIIKQHFVYKFPKNLDIERCAPLMCAGATTYSPLR-QAKVGPGMKVGIVGIGGLGHIAVKIAKAMGAHVVAITRTEWKFKDSVNNLGANESILSTN 301          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: YJGB_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yjgB OS=Escherichia coli (strain K12) GN=yjgB PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 7.608e-30
Identity = 71/233 (30.47%), Postives = 117/233 (50.21%), Query Frame = 3
Query:   93 WAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSK--FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMG 785
            +AA++  G    + +   E    DV +++ +CGICHSDL    NEWG + YP+V GHE++G V  +G+       + G +VG+G    SC  C++C  G +  C    +             GG+++ +  D  +V+  P+N+ +++  PLLC GITV+ P+  + +T                    +  A G +VT  S++P KE E ++ +GAD  + S DP  +KA  G
Sbjct:    7 YAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSDLSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAV-------PTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLL-HAMGCEVTAFSSNPAKEQEVLA-MGADKVVNSRDPQALKALAG 230          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH7_YEAST (NADP-dependent alcohol dehydrogenase 7 OS=Saccharomyces cerevisiae GN=ADH7 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.435e-28
Identity = 73/206 (35.44%), Postives = 107/206 (51.94%), Query Frame = 3
Query:  135 FSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNV-SKFKEGDKVGVGVLVASCQKCESCQQGLENYCPN-MILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            F  +  G  DV ++I  CGIC SD H A   WG      + GHEI+G V KVG+   +  K GD+VGVG    +C +CE C+   E YC N  +LT  +  +DG  + GG++  + + +H+ ++ P+N+P    APLLC GITV+SP+   G   P                  + KA G +V   S    K  +++ KLGAD ++
Sbjct:   26 FDPKPFGDHDVDVEIEACGICGSDFHIAVGNWGPVPENQILGHEIIGRVVKVGSKCHTGVKIGDRVGVGAQALACFECERCKSDNEQYCTNDHVLTMWTPYKDGYISQGGFASHVRLHEHFAIQIPENIPSPLAAPLLCGGITVFSPLLRNG-CGPGKRVGIVGIGGIGHMGILLAKAMGAEVYAFSRGHSKREDSM-KLGADHYI 229          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.874e-28
Identity = 72/205 (35.12%), Postives = 101/205 (49.27%), Query Frame = 3
Query:  162 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL--VSSDPAK 767
            +V +KI  CG+CH+DLH A  +W +    P++PGHE VG V +V   V   K GD+VG+  L ++C +CE C  G E  CP+ +    S+D       GGY++       YV + PDN+     AP+LCAG+T Y  +K  G   P                    KA GL V  +  S +K S+    LGAD  +  +  DP K
Sbjct:   27 EVLVKIEACGVCHTDLHAAHGDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGIPWLYSACGECEYCLTGQETLCPHQLNGGYSVD-------GGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTTYKALKVSG-ARPGEWVAIYGIGGLGHIALQYAKAMGLNVVAVDISDEK-SKLAKDLGADIAINGLKEDPVK 222          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.615e-27
Identity = 70/207 (33.82%), Postives = 102/207 (49.28%), Query Frame = 3
Query:  162 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAA 779
            +V ++I  CG+CH+DLH A  +W V    P++PGHE VG V +VG  V+  K GD+VG+  L ++C  C+ C  G E  C +      S+D       GGY++       YV++ PDN+  +  AP+ CAG+T Y  +K  G  +P                    KA GL V  +    +K  E   +LGAD  +   +P K  AA
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEK-LELAKELGADLVV---NPLKEDAA 221          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26
Identity = 65/193 (33.68%), Postives = 95/193 (49.22%), Query Frame = 3
Query:  162 DVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGAD 737
            +V ++I  CG+CH+DLH A  +W V    P++PGHE VG + +VG  V+  K GD+VG+  L ++C  C+ C  G E  C        S+D       GGY++       YV++ PDN+  +  AP+ CAG+T Y  +K  G  +P                    KA GL V  +    +K  E   +LGAD
Sbjct:   27 EVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCERQQNAGYSVD-------GGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDLGDEK-LELAKQLGAD 210          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH1_ASPFN (Alcohol dehydrogenase 1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=adh1 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 5.103e-26
Identity = 65/199 (32.66%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  153 GADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            G D++ +K+ + G+CH+DLH  + +W +    P+V GHE  G V   G+ V++F+ GD  G+  L  SC  CE C+Q  E  CPN  L+  ++D       G +    +    +  + P N+PLDA AP+LCAGITVY  +K  G+                       KA G++V  I    +K++    +LGA+A++
Sbjct:   30 GPDEILVKVRYSGVCHTDLHALKGDWPLPVKMPLVGGHEGAGVVVARGDLVTEFEIGDHAGLKWLNGSCLACEFCKQADEPLCPNASLSGYTVD-------GTFQQYAIGKATHASKLPKNVPLDAVAPVLCAGITVYKGLKESGVRPGQTVAIVGAGGGLGSLALQYAKAMGIRVVAIDGGEEKQA-MCEQLGAEAYV 220          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.704e-26
Identity = 69/211 (32.70%), Postives = 102/211 (48.34%), Query Frame = 3
Query:  153 GADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSK--FKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKA 776
            G D++ +K+ + G+CH+DLH  + +W + +  P++ GHE  G V   G  V    FK GD+ G+  L  SC  CE C Q  E  CP+  L+  ++D       G +    +       + PDN+PLDA AP+LCAGITVY  +K  G                        KA GL+   I +  +K++    +LGA+ F+  S  A V A
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHASLSGYTVD-------GTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITVYKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDEKKA-MCEQLGAEVFIDFSKSADVVA 232          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.485e-25
Identity = 62/201 (30.85%), Postives = 100/201 (49.75%), Query Frame = 3
Query:  147 ETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            E G D+V + I + G+CH+DLH  + +W +    P++ GHE  G V KVG  V++ K GD+VGV  + +SC  CE C +  E  CP++ L+  ++D       G +    + +  +    P+++PL+  AP++CAGIT Y  +K   +                       KA  ++V  I T   K +E +   GA+ FL
Sbjct:   30 EPGQDEVLVNIKYTGVCHTDLHALQGDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQLSGYTVD-------GTFQHYCIANATHATIIPESVPLEVAAPIMCAGITCYRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAMAMRVVAIDTGDDK-AELVKSFGAEVFL 222          
The following BLAST results are available for this feature:
BLAST of CN182542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADH6_YEAST3.189e-3640.40NADP-dependent alcohol dehydrogenase 6 OS=Saccharo... [more]
YL498_MIMIV1.134e-3332.92Probable zinc-type alcohol dehydrogenase-like prot... [more]
YJGB_ECOLI7.608e-3030.47Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH7_YEAST1.435e-2835.44NADP-dependent alcohol dehydrogenase 7 OS=Saccharo... [more]
ADH2_BACST1.874e-2835.12Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH3_BACST4.615e-2733.82Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_BACST1.028e-2633.68Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
ADH1_ASPFN5.103e-2632.66Alcohol dehydrogenase 1 OS=Aspergillus flavus (str... [more]
ADH3_EMENI8.704e-2632.70Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH_SCHPO1.485e-2530.85Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002K05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182542 ID=CN182542; Name=CN182542; organism=Citrus sinensis; type=EST; length=793bp
GAGGGTTTAAGTGAGAGTGAAGGATAAAGGCCAGAGAGAGAGAAAGCATG
GCAAAATCACCAGAAACAGAGCAGCCTCAAAAGGCCATTGGTTGGGCTGC
CAGAGACAACACTGGAACCTTCTCCCCATTCCATTTCTCCAGAAGAGAAA
CTGGTGCTGATGATGTAACTATTAAGATCCTCTTTTGTGGGATTTGCCAC
TCGGACTTGCATTGTGCCAGAAATGAATGGGGTGTCACCAATTACCCAAT
TGTTCCCGGGCATGAAATTGTTGGTACTGTGACAAAAGTTGGAAATAACG
TGTCAAAATTCAAAGAGGGTGACAAGGTTGGAGTTGGGGTCTTGGTAGCC
TCCTGCCAAAAATGTGAAAGCTGTCAGCAGGGCTTGGAGAATTACTGTCC
TAATATGATACTTACATATAACTCCATTGATCGTGATGGAACAAAAACTT
ATGGTGGTTACTCAGATCTGATTGTTGTTGATCAGCATTATGTGCTCCGC
TTTCCTGACAACATGCCTCTTGATGCGGGTGCACCACTTTTGTGTGCGGG
GATCACAGTGTACAGCCCAATGAAATATTATGGAATGACTGAGCCAGGCA
AGCATTTGGGTGTAGCAGGACTTGGTGGGCTTGGCCATGTTGCTGTGAAA
ATTGGCAAGGCCTTTGGGTTGAAAGTCACCGTCATCAGTACTTCTCCGAA
AAAAGAGAGTGAAGCGATCAGCAAACTTGGTGCTGATGCATTCCTTGTTT
CCAGTGATCCTGCTAAAGTTAAGGCTGCTATGGGCACTATGGA
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