CN182542

Overview
NameCN182542
Unique NameCN182542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.657e-24
Identity = 72/210 (34.29%), Postives = 100/210 (47.62%), Query Frame = 3
Query:  147 ETGADDVTIKILFCGICHSDLHCARNEWGVT-NYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVK 773
            + G   V IK    G+CH+DLH A+ +W V  N P +PGHE VG V K+G  V++ KEGD+VGV  L  +C  C  C+ G E  C +   T  S+D       G ++   + D  +V R P  +     AP+LCAG+TVY  +K   +  P                    KA G+ V      P K + A  KLGAD  + +  P  V+
Sbjct:   24 QPGPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLCGSQQNTGYSVD-------GTFAQYGLADPDFVGRLPARLEFGPAAPVLCAGVTVYKGLKETEV-RPGEWVLVSGIGGLGHMAVQYAKAMGMHVAAADIFPDKLALA-EKLGADLVVDARAPDAVE 224          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH1_EMENI (Alcohol dehydrogenase 1 OS=Emericella nidulans GN=alcA PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.470e-22
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 3
Query:  153 GADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADA---FLVSSD-PAKVKAA 779
            G D + +KI + G+CH+DLH     W +    P+V GHE  G V   G  V +F+ GD+ G+  L  SC +CE C+Q  +  C    L+  ++D       G +    +    +  + P  +PLDA AP+LCAGITVY  +K  G+                       KA G++V  +    +K +   S LG +    F  S D  A VKAA
Sbjct:   30 GPDQILVKIRYSGVCHTDLHAMMGHWPIPVKMPLVGGHEGAGIVVAKGELVHEFEIGDQAGIKWLNGSCGECEFCRQSDDPLCARAQLSGYTVD-------GTFQQYALGKASHASKIPAGVPLDAAAPVLCAGITVYKGLKEAGVRPGQTVAIVGAGGGLGSLAQQYAKAMGIRVVAVDGGDEKRAMCES-LGTETYVDFTKSKDLVADVKAA 235          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.625e-22
Identity = 61/197 (30.96%), Postives = 88/197 (44.67%), Query Frame = 3
Query:  159 DDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            +++ I + + G+CH+DLH  + +W + T  P+V GHE  G V  +G NV  +K GD  G+  L  SC  CE CQQG E  C          D  G    G +      D     + P    L   AP+LCAG+TVY  +K   +                       +A GL+V  I    +K  E +  LGA+A++
Sbjct:   34 NELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNC-------GEADLSGYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKALKTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAIDGGDEK-GEFVKSLGAEAYV 222          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 9.959e-22
Identity = 62/197 (31.47%), Postives = 87/197 (44.16%), Query Frame = 3
Query:  159 DDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            +++ I + + G+CH+DLH    +W + T  P+V GHE  G V  +G NV  +K GD  G+  L  SC  CE C+ G E+ CP+        D  G    G + +    D       P    L   AP+LCAGITVY  +K   +                       KA G +V  I   P KE E  + LG + F+
Sbjct:   32 NELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPH-------ADLSGYTHDGSFQEYATADAVQAAHIPQGTDLAEVAPILCAGITVYKALKSANLRAGHWAAISGAAGGLGSLAVQYAKAMGYRVLGIDGGPGKE-ELFTSLGGEVFI 220          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH2_EMENI (Alcohol dehydrogenase 2 OS=Emericella nidulans GN=alcB PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.959e-22
Identity = 73/238 (30.67%), Postives = 106/238 (44.54%), Query Frame = 3
Query:   57 SPETEQPQKAIGWAARDNTGTFSP--FHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPG----HEIVGTVTKVGNNV--SKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            +PE  + QKA+ +   DN GT S         E G ++V I +   G+CHSD     N W +  +P  PG    HE VG V K+G     S  K GD+VGV  + ++C +C  CQ G +  C N  ++       G  T G +   ++    YV   PD +P    APLLCAG+TVY+ +K     +P                     A G+ + VI      + E +   GA+ F+
Sbjct:    3 APEIPKKQKAVIY---DNPGTVSTKVVELDVPEPGDNEVLINLTHSGVCHSDFGIMTNTWKILPFPTQPGQVGGHEGVGKVVKLGAGAEASGLKIGDRVGVKWISSACGQCPPCQDGADGLCFNQKVS-------GYYTPGTFQQYVLGPAQYVTPIPDGLPSAEAAPLLCAGVTVYASLK-RSKAQPGQWIVISGAGGGLGHLAVQIAAKGMGLRVIGVDHGSKEELVKASGAEHFV 229          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH1_NEUCR (Alcohol dehydrogenase 1 OS=Neurospora crassa GN=adh-1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.959e-22
Identity = 64/230 (27.83%), Postives = 100/230 (43.48%), Query Frame = 3
Query:   60 PETEQPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            P+ E P++          G         ++ G D+V I + + G+CH+DLH  + +W + T  P+V GHE  G V   G  V++ + GD  G+  L  SC  C  C Q  E  CP+ +L+  ++D       G +    +    +V + P    L+  AP+LCAGITVY  +K  G+                        A GL    I    +K  +   +LGA A++
Sbjct:    2 PQFEIPEQQWAQVVEKKGGPVVFKQIPVQKPGPDEVLINVKYSGVCHTDLHAMKGDWPLATKMPLVGGHEGAGVVVAKGELVTEVEVGDHAGIKWLNGSCLACSFCMQADEPLCPHALLSGYTVD-------GSFQQYAIAKAAHVAKIPKGCDLETTAPVLCAGITVYKGLKESGVRPGQCVAIVGAGGGLGSMAIQYANAMGLHAIAIDGGEEK-GKNCRELGAQAYV 223          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH_STAES (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adh PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.219e-21
Identity = 59/206 (28.64%), Postives = 99/206 (48.06%), Query Frame = 3
Query:  144 RETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD 758
            RE    +  +K  +CG+CH+DLH    ++G VT   +  GHE +G V K+ +NV   K GD+V +  + A+C  CE C  G E  C +++    ++D       G  ++ ++VD +Y ++ P+N+   A + + CAG+T Y  +K  G+                          G KV     +  K + A  +LGADA + S++
Sbjct:   20 RELRPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGRVIKIADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVD-------GAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFA-KELGADAIINSTN 215          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.898e-21
Identity = 63/198 (31.82%), Postives = 85/198 (42.93%), Query Frame = 3
Query:  156 ADDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFL 746
            A+++ I + + G+CH+DLH  + +W + T  P+V GHE  G V  +G NV  +K GD  GV  L  SC  CE CQ G E  C          D  G    G +      D     R P    L   AP+LCAG+TVY  +K   +                       KA G +V  I     K  E +  LGA+ F+
Sbjct:   31 ANELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCA-------EADLSGYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKALKTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAIDGGEDK-GEFVKSLGAETFI 220          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.943e-21
Identity = 59/206 (28.64%), Postives = 99/206 (48.06%), Query Frame = 3
Query:  144 RETGADDVTIKILFCGICHSDLHCARNEWG-VTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSD 758
            RE    +  +K  +CG+CH+DLH    ++G VT   +  GHE +G V +V +NV   K GD+V +  + A+C  CE C  G E  C +++    ++D       G  ++ ++VD +Y ++ P+N+   A + + CAG+T Y  +K  G+                          G KV     +  K + A  +LGADA + S++
Sbjct:   20 RELKPGEALVKTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVLNAGYTVD-------GAMAEEVIVDANYAVKVPENLDPAAASSITCAGVTTYKAVKVSGIEPGQWLGVFGVGGLGNLALQYAKNVMGAKVVAFDINDDKLNFA-KELGADAIINSTN 215          
BLAST of CN182542 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.455e-21
Identity = 65/207 (31.40%), Postives = 90/207 (43.48%), Query Frame = 3
Query:  159 DDVTIKILFCGICHSDLHCARNEWGV-TNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPXXXXXXXXXXXXXXXXXXIGKAFGLKVTVISTSPKKESEAISKLGADA---FLVSSDPAK 767
            +++ I + + G+CH+DLH  + +W + T  P+V GHE  G V  +G+NV+ ++ GD  G+  L  SC  CE CQ   E  C          D  G    G +      D     R P    L   AP+LCAGITVY  +K   +                       KA G +V  I    +K  E +  LGA+A   F VS D  K
Sbjct:   32 NEILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCA-------KADLSGYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKALKTAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAIDGGEEK-GEFVKSLGAEAYVDFTVSKDIVK 230          
The following BLAST results are available for this feature:
BLAST of CN182542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
ADHA_RHIME3.657e-2434.29Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH1_EMENI4.470e-2231.78Alcohol dehydrogenase 1 OS=Emericella nidulans GN=... [more]
ADH1_CANAL7.625e-2230.96Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
ADH2_YEAST9.959e-2231.47Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH2_EMENI9.959e-2230.67Alcohol dehydrogenase 2 OS=Emericella nidulans GN=... [more]
ADH1_NEUCR9.959e-2227.83Alcohol dehydrogenase 1 OS=Neurospora crassa GN=ad... [more]
ADH_STAES2.219e-2128.64Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH2_CANAL2.898e-2131.82Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
ADH_STAEQ4.943e-2128.64Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH1_PICST6.455e-2131.40Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002K05_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002K05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182542 ID=CN182542; Name=CN182542; organism=Citrus sinensis; type=EST; length=793bp
GAGGGTTTAAGTGAGAGTGAAGGATAAAGGCCAGAGAGAGAGAAAGCATG
GCAAAATCACCAGAAACAGAGCAGCCTCAAAAGGCCATTGGTTGGGCTGC
CAGAGACAACACTGGAACCTTCTCCCCATTCCATTTCTCCAGAAGAGAAA
CTGGTGCTGATGATGTAACTATTAAGATCCTCTTTTGTGGGATTTGCCAC
TCGGACTTGCATTGTGCCAGAAATGAATGGGGTGTCACCAATTACCCAAT
TGTTCCCGGGCATGAAATTGTTGGTACTGTGACAAAAGTTGGAAATAACG
TGTCAAAATTCAAAGAGGGTGACAAGGTTGGAGTTGGGGTCTTGGTAGCC
TCCTGCCAAAAATGTGAAAGCTGTCAGCAGGGCTTGGAGAATTACTGTCC
TAATATGATACTTACATATAACTCCATTGATCGTGATGGAACAAAAACTT
ATGGTGGTTACTCAGATCTGATTGTTGTTGATCAGCATTATGTGCTCCGC
TTTCCTGACAACATGCCTCTTGATGCGGGTGCACCACTTTTGTGTGCGGG
GATCACAGTGTACAGCCCAATGAAATATTATGGAATGACTGAGCCAGGCA
AGCATTTGGGTGTAGCAGGACTTGGTGGGCTTGGCCATGTTGCTGTGAAA
ATTGGCAAGGCCTTTGGGTTGAAAGTCACCGTCATCAGTACTTCTCCGAA
AAAAGAGAGTGAAGCGATCAGCAAACTTGGTGCTGATGCATTCCTTGTTT
CCAGTGATCCTGCTAAAGTTAAGGCTGCTATGGGCACTATGGA
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