CN189098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39 Identity = 93/249 (37.35%), Postives = 133/249 (53.41%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-SPSTLI--------SPEIPQLH------------PNHVVDKD---KPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREKS H +KAGA+N L RVSA+MTNAP++L +DCDM +NDPQ L +C + + FVQ PQ F G K+D + ++ + ++ KG Y GTG F CR++++G P +++ SP +L +++ D +PI + + + +A V+ CNYE+ T WG ++G YGS+ ED TG +H GWRS + PAF G APT L Q KRWA Sbjct: 306 SREKSPGHHHHYKAGAMNALTRVSAVMTNAPIMLNVDCDMFANDPQVVLHAMCLLLGFDDEISSGFVQVPQSFYGDLKDDPFGNKLEVIY----------KGLFYGGTGCFHCRKAIYGIEPDSIVVGREGAAGSPSYKELQFKFESSEELKESARYIISGDMSGEPIVDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWA 544
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37 Identity = 81/224 (36.16%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRW 675 +REK H FKAG+LN L+RVS++++N+P+++ +DCDM SN+ ++ LC+ D ++ FVQ+PQ F + NDIY + ++ +DG G Y GTG F R +L G + S E + V + + +E + + + C YE+ T WG + G+RYG +ED TG + C GWRS++ NP R F G PT+L +L +KRW Sbjct: 284 AREKKPQKQHHFKAGSLNALIRVSSVISNSPIIMNVDCDMYSNNSESIRDALCFFLDEEQGQDIGFVQYPQNFENVVHNDIYGHPINVVNELDHPCLDGWGGMCYYGTGCFHRREALCG---RIYSQEYKE-DWTRVAGRTEDANE---LEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRW 500
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.112e-36 Identity = 92/244 (37.70%), Postives = 126/244 (51.64%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPS----TLISPEIPQLHPNHVVDKD---------------KPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREKS H +KAGA+N L RVSA+MTNAP +L LDCDM N+P+ L +C + + +FVQ PQ+F G K+D + ++ + + G+ GL+G Y GTG F R+ ++G + T +LH + +PI + + + +A VA CNYE T WG ++G YGSL ED TG +H GWRS + PAF G AP L Q KRWA Sbjct: 259 SREKSPNLHHHYKAGAMNALTRVSALMTNAPFMLNLDCDMFVNNPRVVLHAMCLLLGFDDEISCAFVQTPQKFYGALKDDPFGNQLEVSLMKVGRGIAGLQGIFYCGTGCFHRRKVIYGMRTGREGTTGYSSNKELHSKFGSSNNFKESARDVIYGNLSTEPIVDISSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWA 502
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.225e-36 Identity = 92/248 (37.10%), Postives = 129/248 (52.02%), Query Frame = 1 Query: 7 REKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISD-----PATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-------SPSTLISPEIPQL------------HPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 REK + H KAGA+N LLR SA+++NAP +L LDCD N+ Q +C++ + +++FVQFPQRF G+ D YA+ + F LG+DGL+GP YVGTG F R +L+G SP ++ + + +H D I E+ A++S C YE+ T WG +G YG++ ED TG+ +H GWRS + AF G AP L D L+Q RWA Sbjct: 332 REKRRGRAHHRKAGAMNALLRASAVLSNAPFILNLDCDHYVNNSQALRAGICFMIERRGGGAEDAGDVAFVQFPQRFDGVDPGDRYANHNRVFFDCTELGLDGLQGPIYVGTGCLFRRVALYGVDPPRWRSPGGGVAADPAKFGESAPFLASVRAEQSHSRDDGDAIAEASALVS-------CAYEDGTAWGRDVGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWA 572
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 5.518e-36 Identity = 94/290 (32.41%), Postives = 134/290 (46.21%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG---------------------------SPSTLISPEIPQLHPNHVVDK------------------DKPIHESPAML--------------------SLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H KAGA+N L+R SA+M+N P +L DCD N+ Q +C+ D ++++QFPQRF G+ +D YA+ F N +DGL+GP YVGTG F R +++G TL + + +H+V + +P+ + PA+L + A V C YE++T+WG ++G YGS+ ED TGY +H GWRS++C R AF G AP L D L+Q RWA Sbjct: 602 SREKRPGYDHNKKAGAMNALVRCSAVMSNGPFMLNFDCDHYINNAQAVREAMCFFMDRGGE-RIAYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPMYVGTGCMFRRFAVYGFDPPRTAEYTGWLFTKKKVTTFKDPESDTQTLKAEDFDAELTSHLVPRRFGNSSPFMASIPVAEFQARPLADHPAVLHGRPSGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWA 890
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35 Identity = 91/252 (36.11%), Postives = 127/252 (50.40%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPST----------------LISPEIPQLHPN------HVVD----KDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H +K GA+N LLRVS +MTNAP L +DCDM +N+P + +C ++ + + +FVQFPQ+F D Y +E L I G+ G++GP Y+GTG F RR ++G S L + + + N VVD K P ++ A V C+YE QT WG+ +G Y S+ ED T +H GW S F +PD PAF G PT ++ + Q +RWA Sbjct: 258 SREKRPNYLHHYKTGAMNFLLRVSGLMTNAPYTLNVDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQKF-----YDSYTNELAVLQSILGRGVAGIQGPFYIGTGCFHTRRVMYGLSSDDLEDNGNISQVATREFLAEDSLVRKYGNSKELVKSVVDALQRKSNPQKSLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWA 503
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.968e-35 Identity = 90/278 (32.37%), Postives = 137/278 (49.28%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG----SPSTLIS--------------------PEIPQLHPNHVV---------DKDKPIHESPAM--------------------LSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H KAGA+N L+R SAI++N P +L LDCD + + +C++ D ++ ++QFPQRF G+ +D YA+ F N +DG++GP YVGTG F R +L+G +P L+ ++P+ N + + +P+ + PA+ ++ + V C YE++T+WG ++G YGS+ ED TGY +H GWRS++C R +F G AP L D L+Q RWA Sbjct: 576 SREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRGGE-DICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGVQGPVYVGTGTMFRRFALYGFDPPNPDKLLEKKESETEALTTSDFDPDLDVTQLPKRFGNSTLLAESIPIAEFQGRPLADHPAVKYGRPPGALRVPRDPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWA 852
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.318e-34 Identity = 87/250 (34.80%), Postives = 125/250 (50.00%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDK-------------------------PIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 +REK H+ KAGA+NV LRVSA++TNAP ++ D D N+ + +C++ D N +FVQFPQRF + D Y + + F LG++G++GP+YVGTG F R +L+G + P + ++VD K P E + L+ +A C YE+ T WG +G Y ED TG+ LH GWRS++C + AF G AP L + L Q RW+ Sbjct: 377 AREKRPGYDHQKKAGAMNVQLRVSALLTNAPFIINFDGDHYVNNSKAFRAGICFMLDRREGDNTAFVQFPQRFDDVDPTDRYCNHNRVFFDATLLGLNGIQGPSYVGTGCMFRRVALYG-----VDPPRWRPDDGNIVDSSKKFGNLDSFISSIPIAANQERSIISPPALEESILQELSDAMA-CAYEDGTDWGKDVGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWS 620
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.955e-34 Identity = 87/249 (34.94%), Postives = 124/249 (49.80%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPE----------------IPQLHPNHVVDKDKPIHESPAMLSL--------AHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 +REK H+ KAGA+N LRVSA+++NAP + D D N+ Q LC++ D + +FVQFPQRF + D Y + + F LG++G++GP+YVGTG F R +L+G+ PE +P ++ + SPA SL V C YE+ T+WG +G Y ED TG+ LH +GWRS++C + AF G AP L + L Q RW+ Sbjct: 360 AREKRPGYDHQKKAGAMNAQLRVSALLSNAPFIFNFDGDHYINNSQAFRAALCFMLDCRHGDDTAFVQFPQRFDDVDPTDRYCNHNRVFFDATLLGLNGVQGPSYVGTGCMFRRVALYGADPPRWRPEDDDAKALGCPGRYGNSMPFINTIPAAASQERSIASPAAASLDETAAMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWS 608
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 5.165e-34 Identity = 87/252 (34.52%), Postives = 127/252 (50.40%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG---------------------SPSTLI-----SPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H +K GA+N LLRVS +MTNAP +L +DCDM +N+P + +C ++ + + +FVQFPQ F D Y +E L G+ G++GP Y+G+G F RR ++G S +L+ S E+ + + + K P ++ A V C+YE QT WG+ +G Y S+ ED T +H GW S F +PD PAF G P+ + + QH+RWA Sbjct: 258 SREKRPNYLHHYKTGAMNFLLRVSGLMTNAPYMLNVDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQNFY-----DSYTNELVVLQHYMKRGVAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVASREFLSEDSLVRKYGSSKELVKSVVDALQRKSNPQKSLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWA 503 The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bpback to top |