CN189098

Overview
NameCN189098
Unique NameCN189098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39
Identity = 93/249 (37.35%), Postives = 133/249 (53.41%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-SPSTLI--------SPEIPQLH------------PNHVVDKD---KPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREKS    H +KAGA+N L RVSA+MTNAP++L +DCDM +NDPQ  L  +C +       +  FVQ PQ F G  K+D + ++ + ++          KG  Y GTG F CR++++G  P +++        SP   +L               +++  D   +PI +  + + +A  V+ CNYE+ T WG ++G  YGS+ ED  TG  +H  GWRS     + PAF G APT     L Q KRWA
Sbjct:  306 SREKSPGHHHHYKAGAMNALTRVSAVMTNAPIMLNVDCDMFANDPQVVLHAMCLLLGFDDEISSGFVQVPQSFYGDLKDDPFGNKLEVIY----------KGLFYGGTGCFHCRKAIYGIEPDSIVVGREGAAGSPSYKELQFKFESSEELKESARYIISGDMSGEPIVDISSHIEVAKEVSSCNYESGTHWGLEVGWAYGSMTEDILTGQRIHAAGWRSAKLETEPPAFLGCAPTGGPACLTQFKRWA 544          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37
Identity = 81/224 (36.16%), Postives = 124/224 (55.36%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRW 675
            +REK     H FKAG+LN L+RVS++++N+P+++ +DCDM SN+ ++    LC+  D     ++ FVQ+PQ F  +  NDIY      +  ++   +DG  G  Y GTG F  R +L G    + S E  +     V  + +  +E   +  +   +  C YE+ T WG + G+RYG  +ED  TG  + C GWRS++ NP R  F G  PT+L  +L  +KRW
Sbjct:  284 AREKKPQKQHHFKAGSLNALIRVSSVISNSPIIMNVDCDMYSNNSESIRDALCFFLDEEQGQDIGFVQYPQNFENVVHNDIYGHPINVVNELDHPCLDGWGGMCYYGTGCFHRREALCG---RIYSQEYKE-DWTRVAGRTEDANE---LEEMGRSLVTCTYEHNTIWGIEKGVRYGCPLEDVTTGLQIQCRGWRSVYYNPKRKGFLGMTPTSLGQILVLYKRW 500          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.112e-36
Identity = 92/244 (37.70%), Postives = 126/244 (51.64%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPS----TLISPEIPQLHPNHVVDKD---------------KPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREKS    H +KAGA+N L RVSA+MTNAP +L LDCDM  N+P+  L  +C +       + +FVQ PQ+F G  K+D + ++ +   +    G+ GL+G  Y GTG F  R+ ++G  +    T       +LH       +               +PI +  + + +A  VA CNYE  T WG ++G  YGSL ED  TG  +H  GWRS     + PAF G AP      L Q KRWA
Sbjct:  259 SREKSPNLHHHYKAGAMNALTRVSALMTNAPFMLNLDCDMFVNNPRVVLHAMCLLLGFDDEISCAFVQTPQKFYGALKDDPFGNQLEVSLMKVGRGIAGLQGIFYCGTGCFHRRKVIYGMRTGREGTTGYSSNKELHSKFGSSNNFKESARDVIYGNLSTEPIVDISSCVDVAKEVAACNYEIGTCWGQEVGWVYGSLTEDVLTGQRIHAAGWRSTLMEIEPPAFMGCAPNGGPACLTQLKRWA 502          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.225e-36
Identity = 92/248 (37.10%), Postives = 129/248 (52.02%), Query Frame = 1
Query:    7 REKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISD-----PATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-------SPSTLISPEIPQL------------HPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            REK +   H  KAGA+N LLR SA+++NAP +L LDCD   N+ Q     +C++ +          +++FVQFPQRF G+   D YA+  +  F    LG+DGL+GP YVGTG  F R +L+G       SP   ++ +  +               +H  D    I E+ A++S       C YE+ T WG  +G  YG++ ED  TG+ +H  GWRS +      AF G AP  L D L+Q  RWA
Sbjct:  332 REKRRGRAHHRKAGAMNALLRASAVLSNAPFILNLDCDHYVNNSQALRAGICFMIERRGGGAEDAGDVAFVQFPQRFDGVDPGDRYANHNRVFFDCTELGLDGLQGPIYVGTGCLFRRVALYGVDPPRWRSPGGGVAADPAKFGESAPFLASVRAEQSHSRDDGDAIAEASALVS-------CAYEDGTAWGRDVGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLRWA 572          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 5.518e-36
Identity = 94/290 (32.41%), Postives = 134/290 (46.21%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG---------------------------SPSTLISPEIPQLHPNHVVDK------------------DKPIHESPAML--------------------SLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREK     H  KAGA+N L+R SA+M+N P +L  DCD   N+ Q     +C+  D      ++++QFPQRF G+  +D YA+     F  N   +DGL+GP YVGTG  F R +++G                              TL + +      +H+V +                   +P+ + PA+L                    + A  V  C YE++T+WG ++G  YGS+ ED  TGY +H  GWRS++C   R AF G AP  L D L+Q  RWA
Sbjct:  602 SREKRPGYDHNKKAGAMNALVRCSAVMSNGPFMLNFDCDHYINNAQAVREAMCFFMDRGGE-RIAYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGLQGPMYVGTGCMFRRFAVYGFDPPRTAEYTGWLFTKKKVTTFKDPESDTQTLKAEDFDAELTSHLVPRRFGNSSPFMASIPVAEFQARPLADHPAVLHGRPSGALTVPRPPLDPPTVAEAVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLRWA 890          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 91/252 (36.11%), Postives = 127/252 (50.40%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPST----------------LISPEIPQLHPN------HVVD----KDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREK     H +K GA+N LLRVS +MTNAP  L +DCDM +N+P    + +C ++ +     + +FVQFPQ+F      D Y +E   L  I   G+ G++GP Y+GTG F  RR ++G  S                 L    + + + N       VVD    K  P      ++  A  V  C+YE QT WG+ +G  Y S+ ED  T   +H  GW S F +PD PAF G  PT  ++ + Q +RWA
Sbjct:  258 SREKRPNYLHHYKTGAMNFLLRVSGLMTNAPYTLNVDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQKF-----YDSYTNELAVLQSILGRGVAGIQGPFYIGTGCFHTRRVMYGLSSDDLEDNGNISQVATREFLAEDSLVRKYGNSKELVKSVVDALQRKSNPQKSLANLIEAAQEVGHCHYEYQTSWGN-LGWMYDSVAEDINTSVGIHLRGWTSSFISPDPPAFIGSTPTLGLEAIVQQRRWA 503          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.968e-35
Identity = 90/278 (32.37%), Postives = 137/278 (49.28%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG----SPSTLIS--------------------PEIPQLHPNHVV---------DKDKPIHESPAM--------------------LSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREK     H  KAGA+N L+R SAI++N P +L LDCD    + +     +C++ D     ++ ++QFPQRF G+  +D YA+     F  N   +DG++GP YVGTG  F R +L+G    +P  L+                      ++P+   N  +          + +P+ + PA+                    ++ +  V  C YE++T+WG ++G  YGS+ ED  TGY +H  GWRS++C   R +F G AP  L D L+Q  RWA
Sbjct:  576 SREKRPGYDHNKKAGAMNALVRASAILSNGPFILNLDCDHYIYNCKAVREGMCFMMDRGGE-DICYIQFPQRFEGIDPSDRYANNNTVFFDGNMRALDGVQGPVYVGTGTMFRRFALYGFDPPNPDKLLEKKESETEALTTSDFDPDLDVTQLPKRFGNSTLLAESIPIAEFQGRPLADHPAVKYGRPPGALRVPRDPLDATTVAESVSVISCWYEDKTEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDSFRGSAPINLTDRLHQVLRWA 852          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.318e-34
Identity = 87/250 (34.80%), Postives = 125/250 (50.00%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDKDK-------------------------PIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            +REK     H+ KAGA+NV LRVSA++TNAP ++  D D   N+ +     +C++ D     N +FVQFPQRF  +   D Y +  +  F    LG++G++GP+YVGTG  F R +L+G     + P   +    ++VD  K                         P  E   +  L+  +A C YE+ T WG  +G  Y    ED  TG+ LH  GWRS++C  +  AF G AP  L + L Q  RW+
Sbjct:  377 AREKRPGYDHQKKAGAMNVQLRVSALLTNAPFIINFDGDHYVNNSKAFRAGICFMLDRREGDNTAFVQFPQRFDDVDPTDRYCNHNRVFFDATLLGLNGIQGPSYVGTGCMFRRVALYG-----VDPPRWRPDDGNIVDSSKKFGNLDSFISSIPIAANQERSIISPPALEESILQELSDAMA-CAYEDGTDWGKDVGWVYNIATEDVVTGFRLHRTGWRSMYCRMEPDAFRGTAPINLTERLYQILRWS 620          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.955e-34
Identity = 87/249 (34.94%), Postives = 124/249 (49.80%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPE----------------IPQLHPNHVVDKDKPIHESPAMLSL--------AHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            +REK     H+ KAGA+N  LRVSA+++NAP +   D D   N+ Q     LC++ D     + +FVQFPQRF  +   D Y +  +  F    LG++G++GP+YVGTG  F R +L+G+      PE                +P ++        +    SPA  SL           V  C YE+ T+WG  +G  Y    ED  TG+ LH +GWRS++C  +  AF G AP  L + L Q  RW+
Sbjct:  360 AREKRPGYDHQKKAGAMNAQLRVSALLSNAPFIFNFDGDHYINNSQAFRAALCFMLDCRHGDDTAFVQFPQRFDDVDPTDRYCNHNRVFFDATLLGLNGVQGPSYVGTGCMFRRVALYGADPPRWRPEDDDAKALGCPGRYGNSMPFINTIPAAASQERSIASPAAASLDETAAMAEVEEVMTCAYEDGTEWGDGVGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILRWS 608          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 5.165e-34
Identity = 87/252 (34.52%), Postives = 127/252 (50.40%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG---------------------SPSTLI-----SPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678
            SREK     H +K GA+N LLRVS +MTNAP +L +DCDM +N+P    + +C ++ +     + +FVQFPQ F      D Y +E   L      G+ G++GP Y+G+G F  RR ++G                     S  +L+     S E+ +   + +  K  P      ++  A  V  C+YE QT WG+ +G  Y S+ ED  T   +H  GW S F +PD PAF G  P+   + + QH+RWA
Sbjct:  258 SREKRPNYLHHYKTGAMNFLLRVSGLMTNAPYMLNVDCDMYANEPDVVRQAMCVFLQNSKNSNHCAFVQFPQNFY-----DSYTNELVVLQHYMKRGVAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVASREFLSEDSLVRKYGSSKELVKSVVDALQRKSNPQKSLANLVEAAQEVGHCHYEYQTSWGN-LGWLYDSVAEDTNTSIGIHLRGWTSSFISPDPPAFLGSTPSVGPEAIVQHRRWA 503          
The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLH3_ORYSJ6.965e-3937.35Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLE2_ORYSJ2.240e-3736.16Cellulose synthase-like protein E2 OS=Oryza sativa... [more]
CSLH1_ORYSJ1.112e-3637.70Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLF7_ORYSJ4.225e-3637.10Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CSLD3_ORYSJ5.518e-3632.41Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLB5_ARATH2.097e-3536.11Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLD4_ARATH7.968e-3532.37Cellulose synthase-like protein D4 OS=Arabidopsis ... [more]
CSLF8_ORYSJ2.318e-3434.80Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]
CSLF9_ORYSJ3.955e-3434.94Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLB6_ARATH5.165e-3434.52Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bp
AGGTCTAGAGAGAAAAGCAAGACTTCTCCTCACCGTTTCAAAGCCGGTGC
CCTCAACGTCCTGCTTCGAGTGTCGGCTATAATGACCAATGCACCAATGG
TCTTGACATTGGACTGCGACATGAGCTCAAATGATCCTCAGACACCTCTT
CGAGTGCTGTGCTACATATCAGACCCAGCAACTCGACCAAACTTGTCATT
CGTCCAGTTCCCTCAACGTTTTCGCGGACTAAGCAAGAACGACATTTACG
CTTCTGAGTTTAAACGCTTGTTTCTGATTAATTTTCTGGGAATGGACGGG
TTAAAGGGTCCTAATTACGTTGGAACCGGAGCCTTCTTTTGTCGACGGTC
GTTATTCGGTAGCCCATCTACTCTAATTTCCCCAGAAATTCCCCAACTCC
ATCCAAACCATGTCGTTGATAAAGATAAACCAATTCATGAGTCCCCGGCC
ATGCTGTCGCTGGCTCATCACGTAGCAGGTTGCAATTATGAGAACCAAAC
CAAATGGGGGTCTAAGATGGGCATCAGATATGGCTCGTTGGTCGAGGACT
ACTACACTGGATATCTACTGCACTGCGAAGGATGGAGGTCCATATTTTGC
AATCCTGATAGGCCAGCATTTTATGGTGACGCCCCAACAACTCTCGTTGA
TTTGCTAAATCAACACAAGCGATGGGCCATTG
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