CN189098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.151e-33 Identity = 80/241 (33.20%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSP-----STLISPEIPQLHPN--------HVVDKDKPIHESPA---MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SR K+ H KAGALN LR SA+++NA ++ DCD N+ Q +C++ D N +FVQFPQRF + D Y + + F L ++GL+GP+Y+GTG F R +L+G I+PE + + +++D+ SP ++ V +++ +T WG +G Y ED TG+ +H +GWRS++C + AF G AP L + L+Q RW+ Sbjct: 376 SRGKNPNYDHNKKAGALNAQLRASALLSNAQFIINFDCDHYINNSQAFRAAICFMLDQREGDNTAFVQFPQRFDNVDPKDRYGNHNRVFFDGTMLALNGLQGPSYLGTGCMFRRLALYGIDPPHWRQDNITPEASKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWS 616
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.151e-33 Identity = 80/241 (33.20%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSP-----STLISPEIPQLHPN--------HVVDKDKPIHESPA---MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SR K+ H KAGALN LR SA+++NA ++ DCD N+ Q +C++ D N +FVQFPQRF + D Y + + F L ++GL+GP+Y+GTG F R +L+G I+PE + + +++D+ SP ++ V +++ +T WG +G Y ED TG+ +H +GWRS++C + AF G AP L + L+Q RW+ Sbjct: 376 SRGKNPNYDHNKKAGALNAQLRASALLSNAQFIINFDCDHYINNSQALRAAICFMLDQREGDNTAFVQFPQRFDNVDPKDRYGNHNRVFFDGTMLALNGLQGPSYLGTGCMFRRLALYGIDPPHWRQDNITPESSKFGNSILLLESVLEALNQDRFATPSPVNDIFVNELEMVVSASFDKETDWGKGVGYIYDIATEDIVTGFRIHGQGWRSMYCTMEHDAFCGTAPINLTERLHQIVRWS 616
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33 Identity = 94/304 (30.92%), Postives = 132/304 (43.42%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCR--------------RSLFGSPSTLISPE---------------------------IPQLHPNHVVDKD------------------KPIHESPAMLS------------------LAHHVA--GCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H KAGA+N ++R SAI++N P +L DCD + Q +CY+ D + ++QFPQRF G+ +D YA+ F N +DGL+GP YVGTG F R R +G I P + HP+H + +P+ + P++L+ +A V+ C YE+ T+WG ++G YGS+ ED TGY +H GWRS++C R AF G AP L D L+Q RWA Sbjct: 458 SREKRAGYDHNKKAGAMNAMVRASAILSNGPFMLNFDCDHYIYNCQAIREAMCYMLDRGG-DRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCLFRRYAIYGFNPPRAIEYRGTYGQTKVPIDPRQGSEAMPGAGGGRSGGGSVGGDHELQALSTAHPDHEAPQKFGKSKMFIESIAVAEYQGRPLQDHPSVLNGRPPGALLMPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWA 760
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.563e-33 Identity = 94/304 (30.92%), Postives = 132/304 (43.42%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCR--------------RSLFGSPSTLISPE---------------------------IPQLHPNHVVDKD------------------KPIHESPAMLS------------------LAHHVA--GCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H KAGA+N ++R SAI++N P +L DCD + Q +CY+ D + ++QFPQRF G+ +D YA+ F N +DGL+GP YVGTG F R R +G I P + HP+H + +P+ + P++L+ +A V+ C YE+ T+WG ++G YGS+ ED TGY +H GWRS++C R AF G AP L D L+Q RWA Sbjct: 458 SREKRAGYDHNKKAGAMNAMVRASAILSNGPFMLNFDCDHYIYNCQAIREAMCYMLDRGG-DRICYIQFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCLFRRYAIYGFNPPRAIEYRGTYGQTKVPIDPRQGSEAMPGAGGGRSGGGSVGGDHELQALSTAHPDHEAPQKFGKSKMFIESIAVAEYQGRPLQDHPSVLNGRPPGALLMPRPPLDAATVAESVSVISCWYEDNTEWGQRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWA 760
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.348e-33 Identity = 83/230 (36.09%), Postives = 118/230 (51.30%), Query Frame = 1 Query: 58 VLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSP---------STLISPEIPQLHP-------------NHVVD-KDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 V RVSA+MTNAP++L +DCDM N+PQ L +C + + FVQ PQRF K+D + ++ + F G+ G++G Y GTG F R++++G P T+ S +LH N + D KP+ + + + +A V+ CNY+ T WG ++G YGSL ED TG +H GWRS+ + PAF G AP L Q KRWA Sbjct: 284 VKTRVSAVMTNAPIMLNMDCDMFVNNPQAVLHAMCLLLGFDDEASSGFVQAPQRFYDALKDDPFGNQMECFFKRFISGVQGVQGAFYAGTGCFHRRKAVYGVPPNFNGAEREDTIGSSSYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWA 513
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.348e-33 Identity = 83/230 (36.09%), Postives = 118/230 (51.30%), Query Frame = 1 Query: 58 VLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSP---------STLISPEIPQLHP-------------NHVVD-KDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 V RVSA+MTNAP++L +DCDM N+PQ L +C + + FVQ PQRF K+D + ++ + F G+ G++G Y GTG F R++++G P T+ S +LH N + D KP+ + + + +A V+ CNY+ T WG ++G YGSL ED TG +H GWRS+ + PAF G AP L Q KRWA Sbjct: 284 VKTRVSAVMTNAPIMLNMDCDMFVNNPQAVLHAMCLLLGFDDEASSGFVQAPQRFYDALKDDPFGNQMECFFKRFISGVQGVQGAFYAGTGCFHRRKAVYGVPPNFNGAEREDTIGSSSYKELHTRFGNSEELNESARNIIWDLSSKPMVDISSRIEVAKAVSACNYDIGTCWGQEVGWVYGSLTEDILTGQRIHAMGWRSVLMVTEPPAFMGSAPIGGPACLTQFKRWA 513
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33 Identity = 87/249 (34.94%), Postives = 125/249 (50.20%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDP-ATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSL-----------------------FGSPSTLISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H+ KAGA+N LLRVSA+++NAP ++ DCD N+ Q +C++ D +++FVQFPQRF + D YA+ + F L ++GL+GP+Y+GTG F R +L FG+ STL+S + + + I S A A V C Y+ T WG G Y ED TG+ +H +GWRS++ + + AF G AP L + L Q RW+ Sbjct: 385 SREKRPGYNHQKKAGAMNALLRVSALLSNAPFIINFDCDHYVNNSQAFRAPMCFMLDRRGGGDDVAFVQFPQRFDDVDPTDRYANHNRVFFDGTTLSLNGLQGPSYLGTGTMFRRAALYGLEPPRWGAAGSQIKAMDNANKFGASSTLVSSMLDGANQERSITPPVAIDGSVARDLAA--VTACGYDLGTSWGRDAGWVYDIATEDVATGFRMHQQGWRSVYTSMEPAAFRGTAPINLTERLYQILRWS 631
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32 Identity = 88/248 (35.48%), Postives = 125/248 (50.40%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATR--PNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDK------------DKPIHESPA--MLSLAHHVAG-------CNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H+ KAGA+NV+LRVSA+++NAP V+ D D N+ Q +C++ D R N +FVQFPQRF + D YA+ + F L ++GL+GP+Y+GTG F R +L+G Q+ + +K D E + L VAG C YE+ T WG +G Y ED TG+ +H +GWRS++ + + AF G AP L + L Q RW+ Sbjct: 375 SREKRPGYNHQKKAGAMNVMLRVSALLSNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGENTAFVQFPQRFDDVDPTDRYANHNRVFFDGTMLSLNGLQGPSYLGTGTMFRRVALYGVEPPRWGAAASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWS 622
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32 Identity = 88/248 (35.48%), Postives = 125/248 (50.40%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATR--PNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVDK------------DKPIHESPA--MLSLAHHVAG-------CNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H+ KAGA+NV+LRVSA+++NAP V+ D D N+ Q +C++ D R N +FVQFPQRF + D YA+ + F L ++GL+GP+Y+GTG F R +L+G Q+ + +K D E + L VAG C YE+ T WG +G Y ED TG+ +H +GWRS++ + + AF G AP L + L Q RW+ Sbjct: 345 SREKRPGYNHQKKAGAMNVMLRVSALLSNAPFVINFDGDHYVNNSQAFRAPMCFMLDGRGRGGENTAFVQFPQRFDDVDPTDRYANHNRVFFDGTMLSLNGLQGPSYLGTGTMFRRVALYGVEPPRWGAAASQIKAMDIANKFGSSTSFVGTMLDGANQERSITPLAVLDESVAGDLAALTACAYEDGTSWGRDVGWVYNIATEDVVTGFRMHRQGWRSVYASVEPAAFRGTAPINLTERLYQILRWS 592
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.718e-30 Identity = 85/255 (33.33%), Postives = 121/255 (47.45%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFL---GMDGLKGPNYVGTGAFFCRRSLFG-SPSTL-------------------------ISPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H +KAGA+N L RVS +MTNAP +L +DCDM +N+ + +C ++ + + +FVQFPQ F Y S +L +I G+ G++GP VG+G F RR ++G SP L S E+ + K P + + A V C+YE+QT WG +G Y S+ ED T +H GW S + PD PAF G P ++ + Q +RWA Sbjct: 258 SREKRPNYLHHYKAGAMNFLARVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSQNQNHCAFVQFPQEF--------YDSNTIKLTVIKSYMGRGIAGIQGPINVGSGCFHSRRVMYGLSPDELEDNGSLSSVATRELLAEDSLSSGFGNSKEMVTSVVEALQRKPNPQNILTNSIEAAQEVGHCDYESQTSWGKTIGWLYDSMSEDMNTSIGIHSRGWTSSYIAPDPPAFLGSMPPGGLEAMIQQRRWA 504 The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bpback to top |