CN189098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.003e-29 Identity = 85/252 (33.73%), Postives = 116/252 (46.03%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPN-LSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG----------SPSTLI----------------SPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H +KAGA+N L+RVS +MTNAP +L +DCDM +N+ + +C + N +FVQFPQ F D A E L G+ G++GP Y G+G F RR ++G S S+L S E+ + K P + L A V C++E QT WG +G Y S ED T +H GW S + +P PAF G P + + Q +RWA Sbjct: 258 SREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSMNSNHCAFVQFPQEFY-----DSNADELTVLQSYLGRGIAGIQGPTYAGSGCFHTRRVMYGLSIDDLEDDGSLSSLATRKYLAEENLAREFGNSNEMVTSVVEALQRKPNPQNTLANSLEAAQEVGHCHFEYQTSWGKTIGWLYESTAEDANTSIGIHSRGWTSSYISPKPPAFLGAMPPGGPEAMLQQRRWA 504
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 83/252 (32.94%), Postives = 118/252 (46.83%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLF----------GSPSTLI----------------SPEIPQLHPNHVVDKDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H +KAGA+N L+RVS +MTNAP +L +DCDM N+ + +C ++ + +FVQ+PQ F D E L L G+ G++GP Y G+G F RR ++ GS S++ S E+ + + + K P L A + C+YE QT WG +G Y S ED T +H GW S + PD PAF G P +++ Q +RWA Sbjct: 258 SREKRPNHFHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYVNEADVVRQAMCIFLQKSMDSNHCAFVQYPQDF-----YDSNVGELTVLQLYLGRGIAGIQGPQYAGSGCFHTRRVMYGLSLDDLGDDGSLSSIATRKYLAEESLTREFGNSKEMVKSVVDALQRKPFPQKNLKDSLETAQEMGHCHYEYQTSWGKNIGWLYDSTTEDVNTSIGIHSRGWTSSYIFPDPPAFLGCMPQGGPEVMVQQRRWA 504
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.114e-28 Identity = 83/255 (32.55%), Postives = 119/255 (46.67%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLC-YISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINF---LGMDGLKGPNYVGTGAFFCRRSLFG-SPST---------------LISPEIPQLHPN------HVVD----KDKPIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWA 678 SREK H K GA+N L RVS +MTNAP +L +DCDM +ND + +C + + + +FVQF Q F Y S + + ++ G+ G++GP Y+G+G RR ++G SP L+ + + N VVD P + + A V C YE QT WG+ +G Y S+ ED T +H GW S + +PD PAF G P + + L Q +RWA Sbjct: 259 SREKRPNYVHNQKCGAMNFLARVSGLMTNAPYILNVDCDMYANDADVVRQAMCILLQESLNMKHCAFVQFRQEF--------YDSSTELIVVLQSHLGRGIAGIQGPIYIGSGCVHTRRVMYGLSPDDFEVDGSLSSVATREFLVKDSLARRFGNSKEMMKSVVDAIQRNPNPQNILTNSIEAAREVGHCQYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISPDTPAFLGSMPAGVPEALLQQRRWA 505
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26 Identity = 60/132 (45.45%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-SPSTLISPEIPQ 396 SREK H KAGA+N L+RVSA++TNAP +L LDCD N+ + +C++ DP+ ++ +VQFPQRF G+ ++D YA+ F +N G+DGL+GP YVGTG F R++L+G P +L P +P+ Sbjct: 438 SREKRPGYQHHKKAGAMNALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFMMDPSVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGLQGPVYVGTGCCFYRQALYGYGPPSL--PALPK 567 HSP 2 Score: 93.5893 bits (231), Expect = 1.046e-18 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 451 MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 ++ A HV C YE +T+WG ++G YGS+ ED TG+ +HC GWRSI+C P RPAF G AP L D L+Q RWA+ Sbjct: 656 LIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWAL 732
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26 Identity = 60/132 (45.45%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-SPSTLISPEIPQ 396 SREK H KAGA+N L+RVSA++TNAP +L LDCD N+ + +C++ DP+ ++ +VQFPQRF G+ ++D YA+ F +N G+DGL+GP YVGTG F R++L+G P +L P +P+ Sbjct: 438 SREKRPGYQHHKKAGAMNALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFMMDPSVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGLQGPVYVGTGCCFYRQALYGYGPPSL--PALPK 567 HSP 2 Score: 93.5893 bits (231), Expect = 1.046e-18 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 451 MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 ++ A HV C YE +T+WG ++G YGS+ ED TG+ +HC GWRSI+C P RPAF G AP L D L+Q RWA+ Sbjct: 656 LIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPIRPAFKGSAPINLSDRLHQVLRWAL 732
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.779e-26 Identity = 62/135 (45.93%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-SPSTLISPEIPQLHP 405 SREK H KAGA N L+RVSA++TNAP +L LDCD N+ + +C++ DP ++ FVQFPQRF G+ K+D YA+ F +N G+DG++GP YVGTG F R++L+G SP P P++ P Sbjct: 434 SREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGQDVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGTGTVFRRQALYGYSP-----PSKPRILP 563 HSP 2 Score: 93.5893 bits (231), Expect = 1.046e-18 Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 451 MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 ++ A HV C YE +T+WG ++G YGS+ ED TG+ +HC GWRSI+C P RPAF G AP L D L+Q RWA+ Sbjct: 651 LIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWAL 727
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.324e-26 Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG-SPSTLISPEIPQL 399 SREK H KAGA+N L+RVSA++TN P +L LDCD N+ + +C++ DP + +VQFPQRF G+ KND YA+ F IN G+DG++GP YVGTG F R +L+G P + + P L Sbjct: 509 SREKRPGFQHHKKAGAMNALVRVSAVLTNGPFILNLDCDHYINNSKALREAMCFLMDPNLGKQVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKVKHKKPSL 641 HSP 2 Score: 88.5817 bits (218), Expect = 3.363e-17 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 451 MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 +L A HV C YE+++ WG ++G YGS+ ED TG+ +H GWRSI+C P PAF G AP L D LNQ RWA+ Sbjct: 733 LLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWAL 809
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 60/139 (43.17%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVVD 420 SREK H KAGA+N L+RVSA++TNAP +L LDCD N+ + +C++ D L +VQFPQRF G+ ++D YA+ F IN G+DG++GP YVGTG F R++L+G P P+ P D Sbjct: 463 SREKRPGYNHHKKAGAMNSLVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDKQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYG-----YDPPRPEKRPKMTCD 596 HSP 2 Score: 91.6633 bits (226), Expect = 3.973e-18 Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1 Query: 448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 A++ A HV C YE +T+WG ++G YGS+ ED TG+ +HC GW+S++C P R AF G AP L D L+Q RWA+ Sbjct: 729 ALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCTPARAAFKGSAPINLSDRLHQVLRWAL 806
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25 Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG--SPSTLISP 384 SREK H KAGA+N L+RVSA++TNAP +L LDCD N+ + +C++ DP + +VQFPQRF G+ ++D YA+ F IN G+DG++GP YVGTG F R++L+G +P T P Sbjct: 529 SREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKTKKPP 657 HSP 2 Score: 92.8189 bits (229), Expect = 1.783e-18 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 SPA +L A HV C YE++T WG ++G YGS+ ED TG+ +HC GWRSI+C P PAF G AP L D L+Q RWA+ Sbjct: 757 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRWAL 837
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25 Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N L+RVSA++TNAP +L LDCD N+ + +C++ DP + +VQFPQRF G+ ++D YA+ F IN G+DG++GP YVGTG F R++L+G Sbjct: 528 SREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 646 HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 SPA +L A HV C YE++T WG ++G YGS+ ED TG+ +HC GWRSI+C P R AF G AP L D L+Q RWA+ Sbjct: 756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWAL 836 The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bpback to top |