CN189098
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25 Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N L+RVSA++TNAP +L LDCD N+ + +C++ DP + +VQFPQRF G+ ++D YA+ F IN G+DG++GP YVGTG F R++L+G Sbjct: 528 SREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 646 HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 1 Query: 442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 SPA +L A HV C YE++T WG ++G YGS+ ED TG+ +HC GWRSI+C P R AF G AP L D L+Q RWA+ Sbjct: 756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWAL 836
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25 Identity = 57/119 (47.90%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N ++RVSA++TNAP +L LDCD N+ + +C++ DP L +VQFPQRF G+ ND YA+ F IN G+DG++GP YVGTG F R +L+G Sbjct: 465 SREKRPGYAHHKKAGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYG 583 HSP 2 Score: 93.2041 bits (230), Expect = 1.366e-18 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 +++ A HV C YE +T+WG ++G YGS+ ED TG+ +HC GW+S++C P RPAF G AP L D L+Q RWA+ Sbjct: 715 SLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWAL 792
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25 Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG--SPSTLISP 384 SREK H KAGA+N L+RVSA+++NAP +L LDCD N+ + +C++ DP + +VQFPQRF G+ ++D YA+ F IN G+DG++GP YVGTG F R++L+G +P T P Sbjct: 529 SREKRPGYNHHKKAGAMNALVRVSAVLSNAPYLLNLDCDHYINNSKAIREAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKTKKPP 657 HSP 2 Score: 95.9005 bits (237), Expect = 2.107e-19 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1 Query: 442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 SPA +L A HV C YE++T WG ++G YGS+ ED TG+ +HC GWRSI+C P RPAF G AP L D L+Q RWA+ Sbjct: 756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWAL 836
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25 Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNH 411 SREK H KAGA+N L+RVSA++TN +L LDCD N+ + +C++ DP + +VQFPQRF G+ +ND YA+ F IN G+DGL+GP YVGTG F R +L+G P I Q P + Sbjct: 519 SREKRPGFQHHKKAGAMNALVRVSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYG-----YEPPIKQKRPGY 649 HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 ++L A HV C YE+++ WG+++G YGS+ ED TG+ +H GWRSI+C P RPAF G AP L D LNQ RWA+ Sbjct: 740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 817
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25 Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNH 411 SREK H KAGA+N L+RVSA++TN +L LDCD N+ + +C++ DP + +VQFPQRF G+ +ND YA+ F IN G+DGL+GP YVGTG F R +L+G P I Q P + Sbjct: 519 SREKRPGFQHHKKAGAMNALVRVSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYG-----YEPPIKQKRPGY 649 HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 ++L A HV C YE+++ WG+++G YGS+ ED TG+ +H GWRSI+C P RPAF G AP L D LNQ RWA+ Sbjct: 740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 817
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25 Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N L+RVS +++NAP +L +DCD N+ + +C++ DP + + +VQFPQRF G+ K+D Y++ F IN G+DGL+GP YVGTG F R++L+G Sbjct: 514 SREKRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYG 632 HSP 2 Score: 86.6557 bits (213), Expect = 1.278e-16 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 1 Query: 442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 SPA +L A V C YE++T+WG ++G YGS+ ED TG+ +H GWRS++C P PAF G AP L D L+Q RWA+ Sbjct: 734 SPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWAL 814
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N L+RVSA+++NAP +L +DCD N+ + +C++ DP + + +VQFPQRF G+ ++D Y++ F IN G+DG++GP YVGTG F R++L+G Sbjct: 532 SREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 650 HSP 2 Score: 88.5817 bits (218), Expect = 3.363e-17 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 1 Query: 430 PIHESPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 P + +PA +L + V C YE +T+WG ++G YGS+ ED TG+ +HC GWRS++C P R AF G AP L D L+Q RWA+ Sbjct: 748 PSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWAL 832
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N L+RVSA++TN +L LDCD N+ + +C++ DP ++ +VQFPQRF G+ +ND YA+ F IN G+DG++GP YVGTG F R +L+G Sbjct: 526 SREKRPGFQHHKKAGAMNALVRVSAVLTNGQYMLNLDCDHYINNSKALREAMCFLMDPNLGRSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYG 644 HSP 2 Score: 94.7449 bits (234), Expect = 4.693e-19 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 ++L A HV C YE++T+WG+++G YGS+ ED TG+ +H GWRSI+C P RPAF G AP L D LNQ RWA+ Sbjct: 748 SLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 825
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360 SREK H KAGA+N L+RVS +++NAP +L +DCD N+ + +C++ DP + + +VQFPQRF G+ ++D Y++ F IN G+DGL+GP YVGTG F R++L+G Sbjct: 526 SREKRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYG 644 HSP 2 Score: 84.3445 bits (207), Expect = 6.343e-16 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 SPA +L A V C YE++T+WG ++G YGS+ ED TG+ +H GWRS++C P AF G AP L D L+Q RWA+ Sbjct: 749 SPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWAL 829
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24 Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVV 417 SREK H KAGA+N L+RVSA++TN +L +DCD N+ + +C++ DPA +VQFPQRF G+ +D YA+ F IN G+DG++GP YVGTG F R++L+G L + L PN +V Sbjct: 525 SREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEED---LEPNIIV 659 HSP 2 Score: 94.7449 bits (234), Expect = 4.693e-19 Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 430 PIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681 P +L A HV C YE++T+WG ++G YGS+ ED TG+ +H GW SI+CNP RPAF G AP L D LNQ RWA+ Sbjct: 741 PTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWAL 824 The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bpback to top |