CN189098

Overview
NameCN189098
Unique NameCN189098
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.506e-25
Identity = 56/119 (47.06%), Postives = 78/119 (65.55%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360
            SREK     H  KAGA+N L+RVSA++TNAP +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+ ++D YA+     F IN  G+DG++GP YVGTG  F R++L+G
Sbjct:  528 SREKRPGYNHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 646          

HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SPA +L  A HV  C YE++T WG ++G  YGS+ ED  TG+ +HC GWRSI+C P R AF G AP  L D L+Q  RWA+
Sbjct:  756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKRAAFKGSAPLNLSDRLHQVLRWAL 836          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 57/119 (47.90%), Postives = 76/119 (63.87%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360
            SREK     H  KAGA+N ++RVSA++TNAP +L LDCD   N+ +     +C++ DP     L +VQFPQRF G+  ND YA+     F IN  G+DG++GP YVGTG  F R +L+G
Sbjct:  465 SREKRPGYAHHKKAGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYG 583          

HSP 2 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            +++  A HV  C YE +T+WG ++G  YGS+ ED  TG+ +HC GW+S++C P RPAF G AP  L D L+Q  RWA+
Sbjct:  715 SLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWAL 792          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 58/129 (44.96%), Postives = 82/129 (63.57%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG--SPSTLISP 384
            SREK     H  KAGA+N L+RVSA+++NAP +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+ ++D YA+     F IN  G+DG++GP YVGTG  F R++L+G  +P T   P
Sbjct:  529 SREKRPGYNHHKKAGAMNALVRVSAVLSNAPYLLNLDCDHYINNSKAIREAMCFMMDPLVGKKVCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKTKKPP 657          

HSP 2 Score: 95.9005 bits (237), Expect = 2.107e-19
Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SPA +L  A HV  C YE++T WG ++G  YGS+ ED  TG+ +HC GWRSI+C P RPAF G AP  L D L+Q  RWA+
Sbjct:  756 SPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSITEDILTGFKMHCHGWRSIYCIPKRPAFKGSAPLNLSDRLHQVLRWAL 836          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNH 411
            SREK     H  KAGA+N L+RVSA++TN   +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+ +ND YA+     F IN  G+DGL+GP YVGTG  F R +L+G       P I Q  P +
Sbjct:  519 SREKRPGFQHHKKAGAMNALVRVSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYG-----YEPPIKQKRPGY 649          

HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            ++L  A HV  C YE+++ WG+++G  YGS+ ED  TG+ +H  GWRSI+C P RPAF G AP  L D LNQ  RWA+
Sbjct:  740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 817          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNH 411
            SREK     H  KAGA+N L+RVSA++TN   +L LDCD   N+ +     +C++ DP     + +VQFPQRF G+ +ND YA+     F IN  G+DGL+GP YVGTG  F R +L+G       P I Q  P +
Sbjct:  519 SREKRPGFQHHKKAGAMNALVRVSAVLTNGQYLLNLDCDHYINNSKALREAMCFLMDPNLGRRVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYG-----YEPPIKQKRPGY 649          

HSP 2 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            ++L  A HV  C YE+++ WG+++G  YGS+ ED  TG+ +H  GWRSI+C P RPAF G AP  L D LNQ  RWA+
Sbjct:  740 SLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 817          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25
Identity = 54/119 (45.38%), Postives = 78/119 (65.55%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360
            SREK     H  KAGA+N L+RVS +++NAP +L +DCD   N+ +     +C++ DP +   + +VQFPQRF G+ K+D Y++     F IN  G+DGL+GP YVGTG  F R++L+G
Sbjct:  514 SREKRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYG 632          

HSP 2 Score: 86.6557 bits (213), Expect = 1.278e-16
Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 1
Query:  442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SPA +L  A  V  C YE++T+WG ++G  YGS+ ED  TG+ +H  GWRS++C P  PAF G AP  L D L+Q  RWA+
Sbjct:  734 SPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKIPAFKGSAPINLSDRLHQVLRWAL 814          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360
            SREK     H  KAGA+N L+RVSA+++NAP +L +DCD   N+ +     +C++ DP +   + +VQFPQRF G+ ++D Y++     F IN  G+DG++GP YVGTG  F R++L+G
Sbjct:  532 SREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYG 650          

HSP 2 Score: 88.5817 bits (218), Expect = 3.363e-17
Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 1
Query:  430 PIHESPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            P + +PA +L  +  V  C YE +T+WG ++G  YGS+ ED  TG+ +HC GWRS++C P R AF G AP  L D L+Q  RWA+
Sbjct:  748 PSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCMPKRAAFKGSAPINLSDRLHQVLRWAL 832          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360
            SREK     H  KAGA+N L+RVSA++TN   +L LDCD   N+ +     +C++ DP    ++ +VQFPQRF G+ +ND YA+     F IN  G+DG++GP YVGTG  F R +L+G
Sbjct:  526 SREKRPGFQHHKKAGAMNALVRVSAVLTNGQYMLNLDCDHYINNSKALREAMCFLMDPNLGRSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYG 644          

HSP 2 Score: 94.7449 bits (234), Expect = 4.693e-19
Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 1
Query:  448 AMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            ++L  A HV  C YE++T+WG+++G  YGS+ ED  TG+ +H  GWRSI+C P RPAF G AP  L D LNQ  RWA+
Sbjct:  748 SLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWAL 825          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24
Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFG 360
            SREK     H  KAGA+N L+RVS +++NAP +L +DCD   N+ +     +C++ DP +   + +VQFPQRF G+ ++D Y++     F IN  G+DGL+GP YVGTG  F R++L+G
Sbjct:  526 SREKRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYG 644          

HSP 2 Score: 84.3445 bits (207), Expect = 6.343e-16
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  442 SPA-MLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            SPA +L  A  V  C YE++T+WG ++G  YGS+ ED  TG+ +H  GWRS++C P   AF G AP  L D L+Q  RWA+
Sbjct:  749 SPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWAL 829          
BLAST of CN189098 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.175e-24
Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 1
Query:    4 SREKSKTSPHRFKAGALNVLLRVSAIMTNAPMVLTLDCDMSSNDPQTPLRVLCYISDPATRPNLSFVQFPQRFRGLSKNDIYASEFKRLFLINFLGMDGLKGPNYVGTGAFFCRRSLFGSPSTLISPEIPQLHPNHVV 417
            SREK     H  KAGA+N L+RVSA++TN   +L +DCD   N+ +     +C++ DPA      +VQFPQRF G+  +D YA+     F IN  G+DG++GP YVGTG  F R++L+G    L   +   L PN +V
Sbjct:  525 SREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKKCCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEED---LEPNIIV 659          

HSP 2 Score: 94.7449 bits (234), Expect = 4.693e-19
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  430 PIHESPAMLSLAHHVAGCNYENQTKWGSKMGIRYGSLVEDYYTGYLLHCEGWRSIFCNPDRPAFYGDAPTTLVDLLNQHKRWAI 681
            P      +L  A HV  C YE++T+WG ++G  YGS+ ED  TG+ +H  GW SI+CNP RPAF G AP  L D LNQ  RWA+
Sbjct:  741 PTTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCNPPRPAFKGSAPINLSDRLNQVLRWAL 824          
The following BLAST results are available for this feature:
BLAST of CN189098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA5_ORYSI1.506e-2547.06Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA4_ARATH2.569e-2547.90Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA6_ORYSJ3.356e-2544.96Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA2_ORYSJ3.356e-2544.12Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA2_ORYSI3.356e-2544.12Probable cellulose synthase A catalytic subunit 2 ... [more]
CESA5_ARATH9.763e-2545.38Cellulose synthase A catalytic subunit 5 [UDP-form... [more]
CESA9_ARATH1.275e-2444.54Probable cellulose synthase A catalytic subunit 9 ... [more]
CESA8_ORYSJ1.275e-2446.22Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA6_ARATH2.175e-2444.54Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA1_ARATH2.175e-2442.75Cellulose synthase A catalytic subunit 1 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001F01_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189098 ID=CN189098; Name=CN189098; organism=Citrus sinensis; type=EST; length=682bp
AGGTCTAGAGAGAAAAGCAAGACTTCTCCTCACCGTTTCAAAGCCGGTGC
CCTCAACGTCCTGCTTCGAGTGTCGGCTATAATGACCAATGCACCAATGG
TCTTGACATTGGACTGCGACATGAGCTCAAATGATCCTCAGACACCTCTT
CGAGTGCTGTGCTACATATCAGACCCAGCAACTCGACCAAACTTGTCATT
CGTCCAGTTCCCTCAACGTTTTCGCGGACTAAGCAAGAACGACATTTACG
CTTCTGAGTTTAAACGCTTGTTTCTGATTAATTTTCTGGGAATGGACGGG
TTAAAGGGTCCTAATTACGTTGGAACCGGAGCCTTCTTTTGTCGACGGTC
GTTATTCGGTAGCCCATCTACTCTAATTTCCCCAGAAATTCCCCAACTCC
ATCCAAACCATGTCGTTGATAAAGATAAACCAATTCATGAGTCCCCGGCC
ATGCTGTCGCTGGCTCATCACGTAGCAGGTTGCAATTATGAGAACCAAAC
CAAATGGGGGTCTAAGATGGGCATCAGATATGGCTCGTTGGTCGAGGACT
ACTACACTGGATATCTACTGCACTGCGAAGGATGGAGGTCCATATTTTGC
AATCCTGATAGGCCAGCATTTTATGGTGACGCCCCAACAACTCTCGTTGA
TTTGCTAAATCAACACAAGCGATGGGCCATTG
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