CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: GRP75_HUMAN (Stress-70 protein, mitochondrial OS=Homo sapiens GN=HSPA9 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 63/150 (42.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  235 RNFSSKS-QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESA 672
            R+++S++ +G V+GIDLGTT S VAVM+G+   V+E  EG R T       PSVV F  +GE  VG  A       P+   + TK L+G  YD  +VQ  +     KIVR   G+AWVE    ++SP++I AF+L KM+   E YL  +A
Sbjct:   44 RDYASEAIKGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTT-------PSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTA 186          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: GRP75_CRIGR (Stress-70 protein, mitochondrial OS=Cricetulus griseus GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 65/150 (43.33%), Postives = 88/150 (58.67%), Query Frame = 1
Query:  235 RNFSSKS-QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESA 672
            R+++S++ +G V+GIDLGTT S VAVM+G+   V+E  EG R T       PSVV F  +GE  VG  A       P+   + TK L+G  YD  +VQ  T   P KIVR   G+AWVE    ++SP++I AF+L KM+   E YL  +A
Sbjct:   44 RDYASETIKGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTT-------PSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDTKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTA 186          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: GRP75_BOVIN (Stress-70 protein, mitochondrial OS=Bos taurus GN=HSPA9 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 63/150 (42.00%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  235 RNFSSKS-QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESA 672
            R+++S++ +G V+GIDLGTT S VAVM+G+   V+E  EG R T       PSVV F  +GE  VG  A       P+   + TK L+G  YD  +VQ  +     KIVR   G+AWVE    ++SP++I AF+L KM+   E YL  +A
Sbjct:   44 RDYASEAIKGAVVGIDLGTTNSCVAVMEGKQAKVLENAEGARTT-------PSVVAFTADGERLVGMPAKRQAVTNPNNTFYATKRLIGRRYDDPEVQKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHTA 186          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.001e-21
Identity = 64/151 (42.38%), Postives = 85/151 (56.29%), Query Frame = 1
Query:  232 ARNFSS---KSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE 666
            AR ++S   K +G V+GIDLGTT S VAVM+G+ P +IE  EG R T       PSVV F  +GE  VG  A     + P   LF TK L+G  +  ++VQ  +     KIV+   G+AWVE     +SPA+I  F+L KM+   E YL +
Sbjct:   29 ARRWNSTEEKVKGQVIGIDLGTTNSAVAVMEGKTPKIIENAEGARTT-------PSVVAFAQDGERLVGIAAKRQAVVNPENTLFATKRLIGRKFTDAEVQRDIKEVPYKIVQHTNGDAWVEARGEKYSPAQIGGFVLGKMKETAENYLSK 172          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: HSP7E_YEAST (Heat shock protein SSC3, mitochondrial OS=Saccharomyces cerevisiae GN=ECM10 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 63/150 (42.00%), Postives = 84/150 (56.00%), Query Frame = 1
Query:  229 LARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKES 669
            L R  S+K    V+GIDLGTT S VA+M+G+ P +IE  EG R T       PSVV F  +GE  VG  A   + +     LF TK L+G  ++ ++VQ  +     KIV+   G+AWVE     +SPA+I  FIL KM+   E YL +S
Sbjct:   17 LTRFQSTKIPDAVIGIDLGTTNSAVAIMEGKVPRIIENAEGSRTT-------PSVVAFTKDGERLVGEPAKRQSVINSENTLFATKRLIGRRFEDAEVQRDINQVPFKIVKHSNGDAWVEARNRTYSPAQIGGFILNKMKETAEAYLAKS 159          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP5 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisA53) GN=dnaK PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 60/137 (43.80%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G+ P VIE  EG        R+ PS+V F  +GE  VG+ A       P R  F  K L+G  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKTPKVIENAEG-------MRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADANTYSPSQVSAFILQKMKETAEAHL 131          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_METRJ (Chaperone protein dnaK OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=dnaK PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 63/143 (44.06%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A       P R  F  K L+G  YD    Q    L P KI RG  G+AWVE +   +SP++I AF L KM+   E +L +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPKVIENSEGARTT-------PSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPMTQKDKGLVPYKIARGDNGDAWVEADGKKYSPSQISAFTLQKMKETAESHLGQPVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_METPB (Chaperone protein dnaK OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=dnaK PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 63/143 (44.06%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A       P R  F  K L+G  YD    Q    L P KI RG  G+AWVE +   +SP++I AF L KM+   E +L +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPRVIENAEGARTT-------PSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWVEADGKKYSPSQISAFTLQKMKETAESHLGQPVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_METEP (Chaperone protein dnaK OS=Methylobacterium extorquens (strain PA1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 63/143 (44.06%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A       P R  F  K L+G  YD    Q    L P KI RG  G+AWVE +   +SP++I AF L KM+   E +L +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPRVIENAEGARTT-------PSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWVEADGKKYSPSQISAFTLQKMKETAESHLGQPVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_METC4 (Chaperone protein dnaK OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=dnaK PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.308e-21
Identity = 63/143 (44.06%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A       P R  F  K L+G  YD    Q    L P KI RG  G+AWVE +   +SP++I AF L KM+   E +L +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPRVIENAEGARTT-------PSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWVEADGKKYSPSQISAFTLQKMKETAESHLGQPVTQ 137          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP75_HUMAN7.668e-2242.00Stress-70 protein, mitochondrial OS=Homo sapiens G... [more]
GRP75_CRIGR7.668e-2243.33Stress-70 protein, mitochondrial OS=Cricetulus gri... [more]
GRP75_BOVIN7.668e-2242.00Stress-70 protein, mitochondrial OS=Bos taurus GN=... [more]
HSP7M_EMENI1.001e-2142.38Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP7E_YEAST1.308e-2142.00Heat shock protein SSC3, mitochondrial OS=Saccharo... [more]
DNAK_RHOP51.308e-2143.80Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_METRJ1.308e-2144.06Chaperone protein dnaK OS=Methylobacterium radioto... [more]
DNAK_METPB1.308e-2144.06Chaperone protein dnaK OS=Methylobacterium populi ... [more]
DNAK_METEP1.308e-2144.06Chaperone protein dnaK OS=Methylobacterium extorqu... [more]
DNAK_METC41.308e-2144.06Chaperone protein dnaK OS=Methylobacterium chlorom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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