CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_PELCD (Chaperone protein dnaK OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.708e-21
Identity = 62/142 (43.66%), Postives = 78/142 (54.93%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            G V+GIDLGTT S VAVM+G +PVVI   EG R T       PS+V F  NGE  VG+QA       P   LF  K L+G  +DS  V+  +     +IV+   G+AWV+     +SP +I A IL KM+   E YL E  T
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTT-------PSMVAFTENGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDSDAVRRDIQISPFEIVKADNGDAWVDVRDKKYSPPEISAMILQKMKQTAEDYLGEKVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPB (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain BisB18) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 61/137 (44.53%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G+ P VIE  EG        R+ PS+V F  +GE  VG+ A       P R  F  K LVG  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKAPKVIENAEG-------MRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADAKTYSPSQVSAFILQKMKETAEAHL 131          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_AZOC5 (Chaperone protein dnaK OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dnaK PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 62/141 (43.97%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            ++GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A       P R  F  K L+G  YD   V+    L P K+VR   G+AWVE++   +SP++I AFIL KM+   E +L E   K
Sbjct:    4 IIGIDLGTTNSCVAVMEGASPKVIENAEGARTT-------PSIVAFTEDGERLVGQPAKRQGVTNPERTFFAVKRLIGRRYDDPTVEKDKKLVPYKVVRADNGDAWVESDGKKYSPSQISAFILQKMKETAESFLGEKVEK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_METNO (Chaperone protein dnaK OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21
Identity = 63/143 (44.06%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A       PSR  F  K L+G  YD    Q    L P  I R   G+AWV  +   FSP++I AF L KM+   E YL +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGTQPKVIENAEGARTT-------PSIVAFTDDGERLVGQPAKRQAVTNPSRTFFAIKRLIGRTYDDPMTQKDKGLVPYAITRAGNGDAWVAADGKQFSPSQISAFTLQKMKETAESYLGQPVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSL (Chaperone protein dnaK OS=Geobacter sulfurreducens GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.806e-21
Identity = 62/140 (44.29%), Postives = 81/140 (57.86%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VAVM+G +PVVI   EG R T       PS+V F  +GE  VG+QA       P   LF  K L+G  YD+ +V+   S+ P KIV+   G+AWVE    ++S  +I A +L KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTT-------PSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKYDTEEVRKDISISPFKIVKADNGDAWVEARGKMYSAPEISAMVLQKMKQTAEDYLGETVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_XANP2 (Chaperone protein dnaK OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.970e-21
Identity = 61/141 (43.26%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            ++GIDLGTT S VAVM+G  P VIE  EG R T       PS+V F  +GE  VG+ A   +   P R  F  K L+G  YD   V+    L P  IVR   G+AWVE +   +SP++I AF+L KM+   E +L E   K
Sbjct:    4 IIGIDLGTTNSCVAVMEGSTPKVIENAEGARTT-------PSIVAFTEDGERLVGQPAKRQSVTNPERTFFAVKRLIGRRYDDPTVEKDKHLVPYSIVRADNGDAWVEADGKKYSPSQISAFVLQKMKETAESFLGEKVEK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: GRP75_CHICK (Stress-70 protein, mitochondrial OS=Gallus gallus GN=HSPA9 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 1
Query:  232 ARNFSSKS-QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESA 672
            +R ++S++ +G V+GIDLGTT S VAVM+G+   V+E  EG R T       PSVV F  +GE  VG  A       P    + TK L+G  +D S+V+  +     KIVR   G+AWVE    ++SP++I AF+L KM+   E YL   A
Sbjct:   45 SRKYASEAIKGAVIGIDLGTTNSCVAVMEGKQAKVLENSEGARTT-------PSVVAFTADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHPA 188          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GRABC (Chaperone protein dnaK OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21
Identity = 60/141 (42.55%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKV--QTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VA+M+G+D  V+E  EG R T       PS++ F  +GE  VG+ A       PS  L+  K L+G  YD   V     L P  IVRG  G+AWVE     ++P++I AF+L+KM+   E YL E  T+
Sbjct:    4 VIGIDLGTTNSCVAIMEGKDVRVLENAEGARTT-------PSMIAFTDSGERLVGQAAKRQAVTNPSNTLYAVKRLIGRRYDDPTVAKDKDLVPYAIVRGDNGDAWVEARGEKYAPSQISAFVLSKMKETAEAYLGEPVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOMG (Chaperone protein dnaK OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=dnaK PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VA+M+G +PVVI   EG R T       PS+V F  +GE  VG+QA       P   LF  K L+G  +D+ +V+   S+ P KIV+   G+AWV+    ++SP ++ A +L KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAIMEGGEPVVIANSEGSRTT-------PSMVAFAESGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDTDEVRKDISISPFKIVKADNGDAWVDVRGKMYSPPEVSAIVLQKMKKTAEDYLGETVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOP2 (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain HaA2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.107e-20
Identity = 60/137 (43.80%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G++  VIE  EG        R+ PS+V F  +GE  VG+ A       P R  F  K LVG  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKNSKVIENAEG-------MRTTPSIVAFSDDGERLVGQPAKRQAVTNPERTFFAVKRLVGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADGQTYSPSQVSAFILQKMKETAEAHL 131          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_PELCD1.708e-2143.66Chaperone protein dnaK OS=Pelobacter carbinolicus ... [more]
DNAK_RHOPB2.231e-2144.53Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_AZOC52.231e-2143.97Chaperone protein dnaK OS=Azorhizobium caulinodans... [more]
DNAK_METNO3.806e-2144.06Chaperone protein dnaK OS=Methylobacterium nodulan... [more]
DNAK_GEOSL3.806e-2144.29Chaperone protein dnaK OS=Geobacter sulfurreducens... [more]
DNAK_XANP24.970e-2143.26Chaperone protein dnaK OS=Xanthobacter autotrophic... [more]
GRP75_CHICK6.491e-2141.06Stress-70 protein, mitochondrial OS=Gallus gallus ... [more]
DNAK_GRABC6.491e-2142.55Chaperone protein dnaK OS=Granulibacter bethesdens... [more]
DNAK_GEOMG8.478e-2142.14Chaperone protein dnaK OS=Geobacter metallireducen... [more]
DNAK_RHOP21.107e-2043.80Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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