CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPE (Chaperone protein dnaK OS=Clostridium perfringens GN=dnaK PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12
Identity = 50/138 (36.23%), Postives = 66/138 (47.83%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            ++GIDLGTT S VAVM+G +PVVI   EG R T       PSVV F+ NGE  VG+ A       P + +   K  +GT Y                      V  +   ++P +I A IL K++A  E YL E  T+
Sbjct:    4 IIGIDLGTTNSCVAVMEGGEPVVITNSEGARTT-------PSVVSFQANGERLVGQVAKRQAITNPDKTIMSIKRHMGTDYK---------------------VNIDGKDYTPQEISAMILQKLKADAEAYLGEKVTE 113          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CLOP1 (Chaperone protein dnaK OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12
Identity = 50/138 (36.23%), Postives = 66/138 (47.83%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            ++GIDLGTT S VAVM+G +PVVI   EG R T       PSVV F+ NGE  VG+ A       P + +   K  +GT Y                      V  +   ++P +I A IL K++A  E YL E  T+
Sbjct:    4 IIGIDLGTTNSCVAVMEGGEPVVITNSEGARTT-------PSVVSFQANGERLVGQVAKRQAITNPDKTIMSIKRHMGTDYK---------------------VNIDGKDYTPQEISAMILQKLKADAEAYLGEKVTE 113          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK5 (Chaperone protein dnaK OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM+G DPVVI   EG R T       PSVV F+ NGE  VG+ A   +   P + +   K  +GT +                      V  +   ++P +I A +L K++A  E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMEGGDPVVIANSEGARTT-------PSVVSFQANGERLVGQVAKRQSITNPDKTIISIKREMGTNHK---------------------VNIDGKQYTPQEISAMVLQKIKADAEAYLGETVTQ 113          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CLOK1 (Chaperone protein dnaK OS=Clostridium kluyveri (strain NBRC 12016) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12
Identity = 50/138 (36.23%), Postives = 68/138 (49.28%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM+G DPVVI   EG R T       PSVV F+ NGE  VG+ A   +   P + +   K  +GT +                      V  +   ++P +I A +L K++A  E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMEGGDPVVIANSEGARTT-------PSVVSFQANGERLVGQVAKRQSITNPDKTIISIKREMGTNHK---------------------VNIDGKQYTPQEISAMVLQKIKADAEAYLGETVTQ 113          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_HELAH (Chaperone protein dnaK OS=Helicobacter acinonychis (strain Sheeba) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12
Identity = 45/142 (31.69%), Postives = 70/142 (49.30%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S +AV +G +  +I   EG   T       PS+V F   GE  VG  A       P + ++  K ++G +++  K + +    P  +    G   +E    +++P +I A IL K++   E YL ES T+
Sbjct:    2 GKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTT-------PSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEEKAKEAEKRLPYKIVDRNGACAIEISGKVYTPQEISAKILMKLKEDAESYLGESVTE 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CHLAB (Chaperone protein dnaK OS=Chlamydophila abortus GN=dnaK PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12
Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 1
Query:  250 KSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYD--SSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            K    ++GIDLGTT S V+VM+G    VI   EG R T       PS+V FK N E+ VG  A       P++ L  TK  +G  Y    S+++T  Y ++  G  G+     +   F+P +I A +L KM+   E YL E  T+
Sbjct:    5 KKSSKIIGIDLGTTNSCVSVMEGGQAKVIVSSEGTRTT-------PSIVAFKGN-ETLVGIPAKRQAVTNPAKTLASTKRFIGRKYSEVESEIKTVPY-QVASGSNGDVVFPIDGKQFTPEEIGAQVLIKMKETAEAYLGEPVTE 140          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: BIP3_MAIZE (Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12
Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 1
Query:  247 SKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYPKIVRGFKGEAWVET-----EFGIFSPAKIQAFILAKMRAIGEVYL 660
            +K  G V+GIDLGTTYS V V +     +I   +G R T       PS V F  + E  +G  A    ++ P R +FD K L+G  +   +VQ    L P  +    G+ +++      E  +FSP +I A IL KM+   E YL
Sbjct:   29 TKKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRIT-------PSWVAF-TDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFQDKEVQRDMKLVPYKIINKDGKPYIQVKIKDGENKVFSPEEISAMILGKMKDTAEAYL 165          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 1
Query:  253 SQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSL--YPKIVRGFKGEAWVETEF----GIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            S+G  +GIDLGTTYS V V Q     +I   +G R T       PS V F  + E  +G  A    ++ P+  +FD K L+G  +D S VQ+ +  +P  V    G   V+ E+      F P +I + +L KM+ I E YL ++ T
Sbjct:    2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTT-------PSYVAF-TDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAGRPKVQVEYKGETKSFYPEEISSMVLTKMKEIAEAYLGKTVT 140          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12
Identity = 52/140 (37.14%), Postives = 66/140 (47.14%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G + VVI   EG R T       PSVV F   GE  VG+ A       P R +   K  +GT +                      V  +   +SP +I A IL+K++A  E YL ES T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGGEAVVIPNAEGARTT-------PSVVGFSKTGERLVGQVAKRQAVSNPDRTIQSIKRYMGTNHK---------------------VSIDGKDYSPQEISAMILSKLKADAEAYLGESVTQ 113          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CLOAB (Chaperone protein dnaK OS=Clostridium acetobutylicum GN=dnaK PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12
Identity = 51/138 (36.96%), Postives = 67/138 (48.55%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM+G DP VI   EG R T       PSVV F+ NGE  VG+ A   +   P + +   K  +GT             K+    K           ++P +I A IL K++A  E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMEGGDPAVIANSEGARTT-------PSVVSFQKNGERLVGQVAKRQSITNPDKTIISIKRKMGTA-----------EKVAIDDKN----------YTPQEISAMILQKLKADAEAYLGETVTQ 113          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOPE1.110e-1236.23Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_CLOP11.110e-1236.23Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_CLOK51.110e-1236.23Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_CLOK11.110e-1236.23Chaperone protein dnaK OS=Clostridium kluyveri (st... [more]
DNAK_HELAH1.450e-1231.69Chaperone protein dnaK OS=Helicobacter acinonychis... [more]
DNAK_CHLAB1.450e-1235.86Chaperone protein dnaK OS=Chlamydophila abortus GN... [more]
BIP3_MAIZE1.450e-1234.48Luminal-binding protein 3 OS=Zea mays GN=BIPE3 PE=... [more]
HSP7C_CHICK1.893e-1234.69Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
DNAK_DESRM1.893e-1237.14Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
DNAK_CLOAB1.893e-1236.96Chaperone protein dnaK OS=Clostridium acetobutylic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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