CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOS7 (Chaperone protein dnaK OS=Rhodopseudomonas sp. (strain No.7) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19
Identity = 59/137 (43.07%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G+   VIE  EG R T       PS+V    +GE  VG+ A       P R  F  K L+G  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTT-------PSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVEADGKTYSPSQVSAFILQKMKETAEAHL 131          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPT (Chaperone protein dnaK OS=Rhodopseudomonas palustris (strain TIE-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19
Identity = 59/137 (43.07%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G+   VIE  EG R T       PS+V    +GE  VG+ A       P R  F  K L+G  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTT-------PSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVEADGKTYSPSQVSAFILQKMKETAEAHL 131          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOPA (Chaperone protein dnaK OS=Rhodopseudomonas palustris GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19
Identity = 59/137 (43.07%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G+   VIE  EG R T       PS+V    +GE  VG+ A       P R  F  K L+G  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKSAKVIENAEGMRTT-------PSIVAITDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKGLVPYKIVKASNGDAWVEADGKTYSPSQVSAFILQKMKETAEAHL 131          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GLUDA (Chaperone protein dnaK OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.599e-19
Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKV--QTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VA+ +G++  VIE  EG R T       PS+V F  NGE  VG+ A       P+  L+  K L+G  YD   V    +L P  IV G  G+AWVE +   ++P++I AF+L KM+   E YL E  ++
Sbjct:    4 VIGIDLGTTNSCVAIREGDETRVIENSEGARTT-------PSMVAFADNGEMLVGQSAKRQAVTNPANTLYAVKRLIGRRYDDPTVTKDKALVPYSIVAGDNGDAWVEAQGKKYAPSQIAAFVLGKMKETAEAYLGEPVSQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHORT (Chaperone protein dnaK OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM G+D  VIE  EG R T       PS V F  +GE  VG+ A       P   LF  K L+G  Y    V+    L P +IV+G  G+AWV+T    ++P+++ AFIL KM+   E +L E  T+
Sbjct:    4 VIGIDLGTTNSCVAVMDGKDVRVIENAEGARTT-------PSQVAFTESGERLVGQPAKRQAVTNPENTLFAIKRLIGRRYSDPTVEKDKGLVPYRIVKGDNGDAWVQTRDEKYAPSQLSAFILQKMKETAEAHLGEPVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHOCS (Chaperone protein dnaK OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 61/141 (43.26%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VA+M+G    VIE  EG R T       PS+V F   GE  VG+ A       P    F  K L+G  YD    Q    L P +IV G  G+AWVE+    +SP++I AFIL KM+   E YL E  T+
Sbjct:    4 VIGIDLGTTNSCVAIMEGTQAKVIENAEGARTT-------PSMVAFTQGGERLVGQPAKRQAVTNPENTFFAIKRLIGRRYDDPLTQKDKGLVPYRIVGGKNGDAWVESHGKQYSPSEISAFILQKMKETAENYLGEKVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHILO (Chaperone protein dnaK OS=Rhizobium loti GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 59/141 (41.84%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDS--SKVQTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S +A+M G++P VIE  EG R T       PS+V    +GE  VG+ A       P   +F  K L+G  YD   ++    L P KIV+G  G+AWVE      SP++I A IL KM+   E YL E   K
Sbjct:    4 VIGIDLGTTNSCIAIMDGKEPKVIENAEGARTT-------PSIVAISGDGERLVGQPAKRQAVTNPENTIFAVKRLIGRRYDDPVTEKDKKLVPYKIVKGDNGDAWVEAGGKKQSPSQISAMILQKMKETAEAYLGEKVEK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_NOVAD (Chaperone protein dnaK OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 59/141 (41.84%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM G  P VIE  EG R T       PS+V F  +GE  +G+ A       P   +F  K L+G  +D    Q  T L P  I +G  G+AWV+     +SP++I AF L KM+   E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMDGGTPKVIENSEGARTT-------PSIVAFTKDGERLIGQPAKRQAVTNPDNTIFAVKRLIGRRFDDPMTQKDTELVPYTITKGKNGDAWVKAGGQDYSPSQISAFTLQKMKETAEAYLGETVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSM (Chaperone protein dnaK OS=Geobacter sp. (strain M21) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VAVM+G +PVVI   EG R T       PS++ F  +GE  VG+QA       P   L+  K L+G  +D+  V+  +     KIV+    +AWVE     +SP +I A +L KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTT-------PSMIAFAESGERLVGQQAKRQAVTNPENTLYAIKRLIGRKFDTEAVKKDIAISPFKIVKADNSDAWVEVRGQKYSPPEISAMVLQKMKKTAEDYLGETVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BRAJA (Chaperone protein dnaK OS=Bradyrhizobium japonicum GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 59/137 (43.07%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            G V+GIDLGTT S VAVM G++  VIE  EG R T       PS+V    +GE  VG+ A       P R  F  K L+G  YD   V+    L P KIV+   G+AWVE +   +SP+++ AFIL KM+   E +L
Sbjct:    2 GKVIGIDLGTTNSCVAVMDGKNAKVIENSEGMRTT-------PSIVAVTDDGERLVGQPAKRQAVTNPERTFFAVKRLIGRRYDDPMVEKDKKLVPYKIVKASNGDAWVEADGQTYSPSQVSAFILQKMKETAEAHL 131          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RHOS71.224e-1943.07Chaperone protein dnaK OS=Rhodopseudomonas sp. (st... [more]
DNAK_RHOPT1.224e-1943.07Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_RHOPA1.224e-1943.07Chaperone protein dnaK OS=Rhodopseudomonas palustr... [more]
DNAK_GLUDA1.599e-1941.13Chaperone protein dnaK OS=Gluconacetobacter diazot... [more]
DNAK_RHORT2.088e-1942.55Chaperone protein dnaK OS=Rhodospirillum rubrum (s... [more]
DNAK_RHOCS2.088e-1943.26Chaperone protein dnaK OS=Rhodospirillum centenum ... [more]
DNAK_RHILO2.088e-1941.84Chaperone protein dnaK OS=Rhizobium loti GN=dnaK P... [more]
DNAK_NOVAD2.088e-1941.84Chaperone protein dnaK OS=Novosphingobium aromatic... [more]
DNAK_GEOSM2.088e-1940.71Chaperone protein dnaK OS=Geobacter sp. (strain M2... [more]
DNAK_BRAJA2.088e-1943.07Chaperone protein dnaK OS=Bradyrhizobium japonicum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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