CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: HSP7M_SCHPO (Heat shock 70 kDa protein, mitochondrial OS=Schizosaccharomyces pombe GN=ssp1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19
Identity = 57/142 (40.14%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  244 SSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYL 660
            + K +G V+GIDLGTT S +A+M+G+ P VI   EG R T       PSVV F  +GE  VG  A     + P    F TK L+G  +   +VQ  +     KIV    G+AW+E     +SP++I  FIL+KMR     YL
Sbjct:   45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTT-------PSVVAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLEARGKTYSPSQIGGFILSKMRETASTYL 179          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BARBK (Chaperone protein dnaK OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.562e-19
Identity = 61/137 (44.53%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQT--SLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE 666
            V+GIDLGTT S VAVM G++  VIE  EG R T       PSVV F  +GE  VG+ A       P   +F  K L+G  +D   V+   +L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTT-------PSVVAFTDSGERLVGQPAKRQAVTNPEGTVFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEENSKKYSPSQISAMILQKMKETAESYLGE 133          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_SINMW (Chaperone protein dnaK OS=Sinorhizobium medicae (strain WSM419) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19
Identity = 59/141 (41.84%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S V+VM G+D  VIE  EG R T       PS+V F  +GE  VG+ A       P   LF  K L+G  ++    Q    + P KIV+   G+AWVE     +SP++I A IL KM+   E YL E   K
Sbjct:    4 VIGIDLGTTNSCVSVMDGKDAKVIENAEGARTT-------PSMVAFTEDGERLVGQPAKRQAVTNPENTLFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWVEAHDKSYSPSQISAMILQKMKETAESYLGEKVEK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RHIME (Chaperone protein dnaK OS=Rhizobium meliloti GN=dnaK PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19
Identity = 59/141 (41.84%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S V+VM G+D  VIE  EG R T       PS+V F  +GE  VG+ A       P   LF  K L+G  ++    Q    + P KIV+   G+AWVE     +SP++I A IL KM+   E YL E   K
Sbjct:    4 VIGIDLGTTNSCVSVMDGKDAKVIENAEGARTT-------PSMVAFTEDGERLVGQPAKRQAVTNPENTLFAIKRLIGRTFEDPTTQKDKGMVPYKIVKADNGDAWVEAHGTSYSPSQISAMILQKMKETAESYLGEKVEK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOUR (Chaperone protein dnaK OS=Geobacter uraniireducens (strain Rf4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19
Identity = 57/140 (40.71%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VA+M+G +P+VI   EG R T       PS+V    +GE  VG+QA       P   LF  K L+G  +DS  V+  +     KIV+   G+AWVE     +S  +I A +L KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAIMEGGEPIVIANAEGSRTT-------PSMVAITDSGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFDSEAVKKDIAISPFKIVKADNGDAWVEVRGQKYSAPEISAMVLQKMKKTAEDYLGETVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BRUSU (Chaperone protein dnaK OS=Brucella suis GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19
Identity = 60/141 (42.55%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKV--QTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM G++  VIE  EG R T       PS++ F    E   G+ A       P   LF  K L+G  YD   V     L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENAEGARTT-------PSIIAFTDGDERLAGQPAKRQAVTNPEGTLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVHGKKYSPSQISAMILQKMKETAESYLGETVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BRUO2 (Chaperone protein dnaK OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=dnaK PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19
Identity = 60/141 (42.55%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKV--QTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM G++  VIE  EG R T       PS++ F    E   G+ A       P   LF  K L+G  YD   V     L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENAEGARTT-------PSIIAFTDGDERLAGQPAKRQAVTNPEGTLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVHGKKYSPSQISAMILQKMKETAESYLGETVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BRUAB (Chaperone protein dnaK OS=Brucella abortus GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.652e-19
Identity = 60/141 (42.55%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKV--QTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM G++  VIE  EG R T       PS++ F    E   G+ A       P   LF  K L+G  YD   V     L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E+ T+
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENAEGARTT-------PSIIAFTDGDERLAGQPAKRQAVTNPEGTLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVHGKKYSPSQISAMILQKMKETAESYLGETVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: HSP71_LEIMA (Heat shock 70-related protein 1, mitochondrial OS=Leishmania major GN=HSP70.1 PE=3 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 1
Query:  217 SSMSLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFG-IFSPAKIQAFILAKMRAIGEVYL 660
            S+  LAR+ S K QG+V+G+DLGTTYS VA M G+   V+E  EG       FR+ PSVV FK   E  VG  A       P    +  K L+G  ++   +Q  +     KIVR   G+AWV+   G  +SP++I AF+L KM+   E +L
Sbjct:   13 SAACLARHESQKVQGDVIGVDLGTTYSCVATMDGDKARVLENSEG-------FRTTPSVVAFK-GSEKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEHIQKDIKNVPYKIVRAGNGDAWVQDGNGKQYSPSQIGAFVLEKMKETAENFL 156          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICRS (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Sheila Smith) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VIE  EG R T       PS++ F  NGE  VG+ A       P   ++  K L+G  +    V+    + P  IV+   G+AWVE +   +SP++I AFIL KM+   E YL +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTT-------PSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQ 136          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7M_SCHPO3.562e-1940.14Heat shock 70 kDa protein, mitochondrial OS=Schizo... [more]
DNAK_BARBK3.562e-1944.53Chaperone protein dnaK OS=Bartonella bacilliformis... [more]
DNAK_SINMW4.652e-1941.84Chaperone protein dnaK OS=Sinorhizobium medicae (s... [more]
DNAK_RHIME4.652e-1941.84Chaperone protein dnaK OS=Rhizobium meliloti GN=dn... [more]
DNAK_GEOUR4.652e-1940.71Chaperone protein dnaK OS=Geobacter uraniireducens... [more]
DNAK_BRUSU4.652e-1942.55Chaperone protein dnaK OS=Brucella suis GN=dnaK PE... [more]
DNAK_BRUO24.652e-1942.55Chaperone protein dnaK OS=Brucella ovis (strain AT... [more]
DNAK_BRUAB4.652e-1942.55Chaperone protein dnaK OS=Brucella abortus GN=dnaK... [more]
HSP71_LEIMA6.076e-1940.13Heat shock 70-related protein 1, mitochondrial OS=... [more]
DNAK_RICRS6.076e-1940.56Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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