CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICRO (Chaperone protein dnaK OS=Rickettsia rickettsii (strain Iowa) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VIE  EG R T       PS++ F  NGE  VG+ A       P   ++  K L+G  +    V+    + P  IV+   G+AWVE +   +SP++I AFIL KM+   E YL +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTT-------PSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQ 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICCN (Chaperone protein dnaK OS=Rickettsia conorii GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VIE  EG R T       PS++ F  NGE  VG+ A       P   ++  K L+G  +    V+    + P  IV+   G+AWVE +   +SP++I AFIL KM+   E YL +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTT-------PSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQ 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICAE (Chaperone protein dnaK OS=Rickettsia africae (strain ESF-5) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VIE  EG R T       PS++ F  NGE  VG+ A       P   ++  K L+G  +    V+    + P  IV+   G+AWVE +   +SP++I AFIL KM+   E YL +  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENAEGERTT-------PSIIAF-ANGEKLVGQSAKRQAVTNPRNTIYAVKRLIGRNFIDPMVRKDQGIVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGDKVTQ 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_PARL1 (Chaperone protein dnaK OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 61/141 (43.26%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTS--LYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM+G    VIE  EG R T       PS+V F  +GE  VG+ A       P+  LF  K L+G  YD    Q    + P  IV+   G+AWVE     +SP++I AFIL KM+   E YL E   K
Sbjct:    4 VIGIDLGTTNSCVAVMEGSSAKVIENSEGMRTT-------PSMVAFTQDGERLVGQSAKRQAVTNPTNTLFAIKRLIGRSYDDPTTQKDKGMVPYDIVKAPNGDAWVEAHGEKYSPSQISAFILQKMKETAESYLGEKVEK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOLS (Chaperone protein dnaK OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VA+M+G +P+VI   EG R T       PS+V F   GE  VG+QA       P   LF  K L+G  +++  V+  +     KIV+   G+AWV+     +SP +I A IL KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAIMEGGEPIVIANSEGSRTT-------PSMVAFTEAGERIVGQQAKRQAVTNPENTLFAIKRLIGRKFETEAVKKDIAISPFKIVKADNGDAWVDVRDKKYSPPEISAIILQKMKKTAEDYLGETVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOBB (Chaperone protein dnaK OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VAVM+G +PVVI   EG R T       PS++ F  +GE  VG+QA       P   L+  K L+G  +++  V+  +     KIV+    +AWVE     +SP +I A +L KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTT-------PSMIAFAESGERLVGQQAKRQAVTNPENTLYAIKRLIGRKFETEAVKKDIAISPFKIVKADNSDAWVEVRGQKYSPPEISAMVLQKMKKTAEDYLGEAVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BARQU (Chaperone protein dnaK OS=Bartonella quintana GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 61/137 (44.53%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQT--SLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE 666
            V+GIDLGTT S VAVM G++  VIE  EG R T       PSVV F   GE  VG+ A       P   +F  K L+G  +D   V+   +L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTT-------PSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGE 133          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BARHE (Chaperone protein dnaK OS=Bartonella henselae GN=dnaK PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 61/137 (44.53%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQT--SLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE 666
            V+GIDLGTT S VAVM G++  VIE  EG R T       PSVV F   GE  VG+ A       P   +F  K L+G  +D   V+   +L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTT-------PSVVAFTDGGERLVGQPAKRQAVTNPEGTIFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGE 133          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: HSP7E_DROME (Heat shock 70 kDa protein cognate 5 OS=Drosophila melanogaster GN=Hsc70-5 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 60/149 (40.27%), Postives = 83/149 (55.70%), Query Frame = 1
Query:  226 SLARNFSSKSQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ---TSLYPKIVRGFKGEAWVETEFG-IFSPAKIQAFILAKMRAIGEVYL 660
            S  R  S + +G V+GIDLGTT S +AVM+G+   VIE  EG R T       PS V F  +GE  VG  A        +   + TK L+G  +D  +V+   T+L  K+V+   G+AWV +  G ++SP++I AFIL KM+   E YL
Sbjct:   41 SQLRYKSGEVKGAVIGIDLGTTNSCLAVMEGKQAKVIENAEGARTT-------PSHVAFTKDGERLVGMPAKRQAVTNSANTFYATKRLIGRRFDDPEVKKDITNLSYKVVKASNGDAWVSSTDGKVYSPSQIGAFILMKMKETAEAYL 182          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICBR (Chaperone protein dnaK OS=Rickettsia bellii (strain RML369-C) GN=dnaK PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 60/143 (41.96%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDS---SKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VIE  EG R T       PS++ F  NGE  VG+ A       P   ++  K L+G  +      K Q  +   IV+   G+AWVE E    SP++I AFIL KM+   E YL E  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIENSEGERTT-------PSIIAF-ANGEKLVGQSAKRQAVTNPRNTVYAVKRLIGRNFTDPMVKKDQEIVPYNIVKADNGDAWVEVEGKKHSPSQISAFILQKMKETAENYLGEKVTQ 136          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_RICRO6.076e-1940.56Chaperone protein dnaK OS=Rickettsia rickettsii (s... [more]
DNAK_RICCN6.076e-1940.56Chaperone protein dnaK OS=Rickettsia conorii GN=dn... [more]
DNAK_RICAE6.076e-1940.56Chaperone protein dnaK OS=Rickettsia africae (stra... [more]
DNAK_PARL16.076e-1943.26Chaperone protein dnaK OS=Parvibaculum lavamentivo... [more]
DNAK_GEOLS6.076e-1940.71Chaperone protein dnaK OS=Geobacter lovleyi (strai... [more]
DNAK_GEOBB6.076e-1940.00Chaperone protein dnaK OS=Geobacter bemidjiensis (... [more]
DNAK_BARQU6.076e-1944.53Chaperone protein dnaK OS=Bartonella quintana GN=d... [more]
DNAK_BARHE6.076e-1944.53Chaperone protein dnaK OS=Bartonella henselae GN=d... [more]
HSP7E_DROME7.935e-1940.27Heat shock 70 kDa protein cognate 5 OS=Drosophila ... [more]
DNAK_RICBR7.935e-1941.96Chaperone protein dnaK OS=Rickettsia bellii (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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