CN189093

Overview
NameCN189093
Unique NameCN189093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_MAGSA (Chaperone protein dnaK OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dnaK PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 59/141 (41.84%), Postives = 79/141 (56.03%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDS--SKVQTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VAVM+G++  VIE  EG R T       PS+  F  +GE  VG+ A       P+  LF  K L+G  ++   +K   +L P  IV G  G+AWVE     +SP+++ AFIL KM+   E YL E  T+
Sbjct:    4 VIGIDLGTTNSCVAVMEGKNAKVIENAEGMRTT-------PSMTAFTESGERLVGQPAKRQAVTNPTSTLFAIKRLIGRRFEDPITKKDMNLVPYHIVAGDNGDAWVEARDAKYSPSQVSAFILQKMKETAEGYLGEKVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_GEOSF (Chaperone protein dnaK OS=Geobacter sp. (strain FRC-32) GN=dnaK PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 56/140 (40.00%), Postives = 76/140 (54.29%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP---KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESAT 675
            V+GIDLGTT S VA+M+G +P+VI   EG R T       PS+V    +GE  VG+QA       P   LF  K L+G  ++S  V+  +     KIV+    +AWVE     +SP +I A +L KM+   E YL E+ T
Sbjct:    4 VIGIDLGTTNSCVAIMEGGEPIVIANAEGSRTT-------PSMVAITDSGERLVGQQAKRQAVTNPENTLFAIKRLIGRKFESEAVKKDIAISPFKIVKADNADAWVEVRGQKYSPPEISAMVLQKMKKTAEDYLGETVT 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BRUME (Chaperone protein dnaK OS=Brucella melitensis GN=dnaK PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 59/141 (41.84%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKV--QTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GID+GTT S VAVM G++  VIE  EG R T       PS++ F    E   G+ A       P   LF  K L+G  YD   V     L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E+ T+
Sbjct:    4 VIGIDMGTTNSCVAVMDGKNAKVIENAEGARTT-------PSIIAFTDGDERLAGQPAKRQAVTNPEGTLFAVKRLIGRRYDDPMVTKDKDLVPYKIVKGDNGDAWVEVHGKKYSPSQISAMILQKMKETAESYLGETVTQ 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_BART1 (Chaperone protein dnaK OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dnaK PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 61/137 (44.53%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQT--SLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE 666
            V+GIDLGTT S VAVM G++  VIE  EG R T       PSVV F   GE  VG+ A       P   +F  K L+G  +D   V+   +L P KIV+G  G+AWVE     +SP++I A IL KM+   E YL E
Sbjct:    4 VIGIDLGTTNSCVAVMDGKNAKVIENSEGARTT-------PSVVAFTDGGERLVGQPAKRQAVTNPEGTVFAVKRLIGRRFDDPMVEKDKALVPYKIVKGDNGDAWVEEAGKKYSPSQISAMILQKMKETAESYLGE 133          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_SILST (Chaperone protein dnaK OS=Silicibacter sp. (strain TM1040) GN=dnaK PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSS---KVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            V+GIDLGTT S VA+M G  P VIE  EG R T       PS+V F    E  VG+ A       P   +F  K L+G  +D S   K + +L   ++ G  G+AWVE +   +SP++I AFIL KM+   E YL E  T+
Sbjct:    4 VIGIDLGTTNSCVAIMDGSQPRVIENAEGARTT-------PSIVAFTDE-ERLVGQPAKRQAVTNPDNTIFGVKRLIGRRFDDSDLAKDKKNLPFAVINGGNGDAWVEAKSEKYSPSQISAFILGKMKETAESYLGEEVTQ 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CAUCR (Chaperone protein dnaK OS=Caulobacter crescentus GN=dnaK PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.036e-18
Identity = 57/141 (40.43%), Postives = 77/141 (54.61%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            ++GIDLGTT S VA+M G+ P VIE  EG R T       PSVV F  +GE  +G+ A       P+  LF  K L+G       V+    + P +IV+G  G+AWV+     +SP ++ AFIL KM+   E +L E  TK
Sbjct:    4 IIGIDLGTTNSCVAIMDGKTPKVIENAEGARTT-------PSVVAFLEDGERLIGQPAKRQAVTNPTNTLFAIKRLIGRTASDPVVEKDKGMVPYEIVKGPTGDAWVKAHGKDYSPQEVSAFILQKMKEAAEAHLGEPVTK 137          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_SOLUE (Chaperone protein dnaK OS=Solibacter usitatus (strain Ellin6076) GN=dnaK PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQTSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G ++GIDLGTT S VAVM+G  P VI   EG R T       PSVV F  +GE  VG+ A       P   +F  K  +G  YD    +  + P K+VRG  G+A V+     +SP +I A IL K++   E YL E  T+
Sbjct:    2 GKIIGIDLGTTNSCVAVMEGGQPTVIANQEGNRTT-------PSVVAFTKSGERLVGQVAKRQAITNPENTVFSIKRFMGRRYDEVNEEMKMVPYKVVRGENGDARVDIMGKKYSPPEISAMILTKLKEAAESYLGEKVTQ 135          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICTY (Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VI+  EG R T       PS++ F  N E  VG+ A       P   ++  K L+G  +    V+    L P  IV+   G+AWVE +   +SP++I AFIL KM+   E YL E  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTT-------PSIIAF-ANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGEKVTQ 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_RICFE (Chaperone protein dnaK OS=Rickettsia felis GN=dnaK PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 58/143 (40.56%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  259 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDSSKVQ--TSLYP-KIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            G V+GIDLGTT S VAVM+G++P VI+  EG R T       PS++ F  N E  VG+ A       P   ++  K L+G  +    V+    L P  IV+   G+AWVE +   +SP++I AFIL KM+   E YL E  T+
Sbjct:    2 GKVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTT-------PSIIAF-ANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVEADNNKYSPSQISAFILQKMKETAENYLGEKVTQ 136          
BLAST of CN189093 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = 1
Query:  265 VLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGTVYDS---SKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATK 678
            ++GIDLGTT S VA+M G+ P VIE  EG R T       PSVV F  +GE  VG+ A       P+  LF  K L+G  +     +K +  +  +IV+G  G+AWV+     +SP ++ AFIL KM+   E +L E  TK
Sbjct:    4 IIGIDLGTTNSCVAIMDGKTPKVIENAEGARTT-------PSVVAFLEDGERLVGQPAKRQAVTNPTNTLFAIKRLIGRNFADPVVAKDKAMVPYEIVKGPTGDAWVKAHGKDYSPQEVSAFILQKMKEAAESHLGEPVTK 137          
The following BLAST results are available for this feature:
BLAST of CN189093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_MAGSA7.935e-1941.84Chaperone protein dnaK OS=Magnetospirillum magneti... [more]
DNAK_GEOSF7.935e-1940.00Chaperone protein dnaK OS=Geobacter sp. (strain FR... [more]
DNAK_BRUME7.935e-1941.84Chaperone protein dnaK OS=Brucella melitensis GN=d... [more]
DNAK_BART17.935e-1944.53Chaperone protein dnaK OS=Bartonella tribocorum (s... [more]
DNAK_SILST1.036e-1841.13Chaperone protein dnaK OS=Silicibacter sp. (strain... [more]
DNAK_CAUCR1.036e-1840.43Chaperone protein dnaK OS=Caulobacter crescentus G... [more]
DNAK_SOLUE1.354e-1840.43Chaperone protein dnaK OS=Solibacter usitatus (str... [more]
DNAK_RICTY1.768e-1840.56Chaperone protein dnaK OS=Rickettsia typhi GN=dnaK... [more]
DNAK_RICFE1.768e-1840.56Chaperone protein dnaK OS=Rickettsia felis GN=dnaK... [more]
DNAK_CAUSK1.768e-1840.43Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E23_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189093 ID=CN189093; Name=CN189093; organism=Citrus sinensis; type=EST; length=678bp
CCAGAATGTNCATCCACAGCTAAAGAAGCACAAGAACAAGCAATACCAAA
CCCATTGGAGAAATATGAGCAGCTTTGTGAGCTCAGTCGTGCTTATCCAT
TGGCTAAGACTTCTGCCTCTTCCGTCAGCCAGGGATGCAGGGAGTTCTTG
AAACTTGCCAACAAGGTTGTAAGTCCAGAACCCAAATTTGTTCCAGCAAT
GCATCACTGTCTAGTCTCATCTATGAGTTTGGCACGCAATTTCAGTTCTA
AATCTCAGGGAAATGTTCTTGGCATTGATCTTGGAACTACATATTCTCGT
GTTGCAGTTATGCAAGGAGAAGATCCCGTGGTGATTGAAGAGGTAGAAGG
TGGCAGATATACTAAGAAGTCATTTCGATCGATGCCTTCAGTAGTGTTCT
TTAAACCCAATGGGGAGTCATGGGTCGGTAGACAAGCAAATATGATGACA
TCTCTGTACCCATCCCGCGCACTGTTTGATACCAAACATTTGGTGGGTAC
AGTGTATGATAGTAGTAAAGTTCAAACAAGTCTCTACCCGAAGATTGTAA
GGGGTTTTAAAGGAGAGGCATGGGTGGAGACGGAATTCGGCATATTCTCT
CCGGCTAAGATACAAGCATTCATCTTAGCCAAAATGAGAGCAATTGGCGA
AGTTTATTTGAAAGAGTCTGCTACAAAG
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