CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.098e-21
Identity = 53/132 (40.15%), Postives = 78/132 (59.09%), Query Frame = 2
Query:   26 RAAREDCNVA-GYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI----GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL 406
            R + ED N+  G  +P GT  +V++W+I   P++WE P EF PERF+    G+ +DV+G+D  L PFGAGRR+CPG +LGL  +   +  LLH F W LP   +   +++ E+  LS     PL  +   R+
Sbjct:  418 RLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEW-LP--HAEHPVDLSEVLKLSCEMARPLHCVPVTRV 546          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.136e-20
Identity = 54/131 (41.22%), Postives = 73/131 (55.73%), Query Frame = 2
Query:   26 RAAREDCNVA-GYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI----GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 403
            R A  D  +A G  +P GT  +V++WAI     +W  P  F PERFI    G  +DV+G D  L PFGAGRR+CPG +LGL  +   +  L+H F W LP    +  ++++E+  LS   K PL   A PR
Sbjct:  422 RLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPD--GSPPVSLDEVLKLSLEMKTPLAAAATPR 550          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.530e-20
Identity = 48/132 (36.36%), Postives = 76/132 (57.58%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 403
            AP L+P +  ++CN+ GY +P+ T VL++ WAI R P LW +   F PERF     + KG   +L+ FG GRR CPG  L ++ I  +L  L+  F WKL   ++ +++++ E  G +  +  PL+ +   R
Sbjct:  367 APLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKL---INGDKIDLAERDGFTLTKLVPLKAMCKSR 490          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.636e-20
Identity = 51/124 (41.13%), Postives = 71/124 (57.26%), Query Frame = 2
Query:   44 CNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI----GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 403
            CN  G  +P GT  +V++WAI    ++W  P+ F PERF+    G  +DV+G D  L PFGAGRR+CPG +LGL  +   +  L+H F W LP   +   + ++E+  LS   K PL   A PR
Sbjct:  426 CN--GMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAA--AVCLDEVLKLSLEMKTPLVAAAIPR 545          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.256e-19
Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI------GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPG------NMSNEELNMEEIFGLSTPRKFPLEVLAHPRLS 409
            +V R    +C V  Y IP+ + + V+VW+IGR+P  W+ P EF PERF+         +DV+G  F+LLPFG+GRRMCPG SL ++ + A L  ++  F + + G         +  +N++E  GL+ PR   L  +   R S
Sbjct:  371 MVTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVGPKGEILKGDDIVINVDERPGLTAPRAHNLVCVPVDRTS 513          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.256e-19
Identity = 55/141 (39.01%), Postives = 79/141 (56.03%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI--GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAW-KLPG-NMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 415
            VAPF +P  +  D  V GY IPKG+ VL+S   IGR+PS+W+KP++F PER +     +D+   D  ++ F AGRR C G  +G  +    L  L+ GF W  +PG N  +   +  ++F        PL  +A PRL+PH
Sbjct:  390 VAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFMAK-----PLYAVATPRLAPH 525          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 2.797e-19
Identity = 50/133 (37.59%), Postives = 76/133 (57.14%), Query Frame = 2
Query:   14 FLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIG--KAIDVKG-HDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 403
            FL+P +  ED  + GY +PK   +   V  IGR P  WE+P  F PERF+G  +A+D+ G    +++PFGAGRR+CPG  L +  ++  + N++  F WK    +   E+++ E    +   K PL+ LA PR
Sbjct:  374 FLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWK---EVQGHEVDLTEKLEFTVVMKHPLKALAVPR 503          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.138e-19
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 2
Query:   26 RAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAID----VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 403
            R +  D  + GY +P GT  +V+ WAI R P +W+ P EF PERF+    D    + G D  L PFG+GRR CPG +LG   +   + +LLH F W +P +   + +++ E+  LS+    PL V   PR
Sbjct:  395 RLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEW-VPSD--EKGVDLTEVLKLSSEMANPLTVKVRPR 521          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.063e-18
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  + G+DIP  + +LV+ W +  +P+LW+KP EF PERF+ +   ++  G+DF  LPFG GRR CPG  L L ++  ++  L+  F    P   S  +++  E  G     +F L +L H
Sbjct:  372 PLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQS--KIDTSEKGG-----QFSLHILKH 495          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.063e-18
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWE-KPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP-GNMSNEELNMEEIFGLSTPRKFPLEV 388
            L+ R   ED  + GYDI  GT V+++ WA+ R+P++W    NE+ PER        +  D + +PFGAGRR+CPG    L + + +L NL+  F W+L  G + +++ ++ E  G+   RKFPL V
Sbjct:  366 LLFRLPSEDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWYEFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIV 491          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
C78A4_PINRA5.098e-2140.15Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C78AB_ORYSJ1.136e-2041.22Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C81E1_GLYEC2.530e-2036.36Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C78A1_MAIZE5.636e-2041.13Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C93B1_GLYEC1.256e-1937.06Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C79A2_ARATH1.256e-1939.01Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
C89A2_ARATH2.797e-1937.59Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
C78A3_SOYBN8.138e-1938.46Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
TCMO_PEA1.063e-1836.64Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
C71AR_ARATH1.063e-1838.10Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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