CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.813e-18
Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGK--AIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  + GYDIP  + +LV+ W +  +P+ W+KP EF PERF  +   ++  G+DF  LPFG GRR CPG  L L ++  +L  L+  F    P   S  +++  E  G     +F L +L H
Sbjct:  373 PLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESLVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQS--QIDTSEKGG-----QFSLHILKH 496          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.813e-18
Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  + GYDIP  + +LV+ W +  +P+ W+KP EF PERF  +   ++  G+DF  LPFG GRR CPG  L L ++  +L  L+  F    P   S  +++  E  G     +F L +L H
Sbjct:  372 PLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPAHWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQS--QIDTSEKGG-----QFSLHILKH 495          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.813e-18
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGK--AIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  +AGYDIP  + +LV+ W +  +P+ W KP+EF PERF+ +   ++  G+DF+ +PFG GRR CPG  L L ++   +  L+  F    P   S  +++  E  G     +F L++L H
Sbjct:  373 PLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQS--KIDTAEKGG-----QFSLQILKH 496          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.368e-18
Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  + GYDIP  + +LV+ W +  +P+ W++P EF PERF+ +   ++  G+DF  LPFG GRR CPG  L L ++  +L  L+  F    P   S  +L+  E  G     +F L +L H
Sbjct:  372 PLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQS--KLDTAEKGG-----QFSLHILKH 495          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.093e-18
Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI--GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  + G+DIP  + +LV+ W +  +P+ W+ P EF PERF+  G  ++  G+DF  LPFG GRR CPG  L L ++  +L  L+  F    P   S  +++  E  G     +F L +L H
Sbjct:  372 PLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQS--KIDTSEKGG-----QFSLHILKH 495          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.093e-18
Identity = 48/131 (36.64%), Postives = 72/131 (54.96%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  ++G+DIP  + +LV+ W +  +P+ W+KP EF PERF+ +   ++  G+DF  LPFG GRR CPG  L L ++  +L  L+  F    P   S  +++  E  G     +F L +L H
Sbjct:  371 PLLVPHMNLHDAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQS--KIDTAEKGG-----QFSLHILKH 494          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.039e-18
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGK--AIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  + G+DIP  + +LV+ W +  +P  W+KP EF PERF+ +   ++  G+DF  LPFG GRR CPG  L L ++  ++  L+  F    P   S  +++ +E  G     +F L +L H
Sbjct:  372 PLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQS--KIDTDEKGG-----QFSLHILKH 495          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.039e-18
Identity = 53/139 (38.13%), Postives = 73/139 (52.52%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDV--KGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 415
            VA F +P  A  D  VAGY IPKG+ VL+S + +GR+P +W  P  F PER + +  +V    +D   + F  G+R C   +LG  +    L  LL GF WKLP N +  EL ME    +   +  PL ++   RL  H
Sbjct:  401 VAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVEL-MESSHDMFLAK--PLVMVGELRLPEH 536          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_ZINEL (Trans-cinnamate 4-monooxygenase OS=Zinnia elegans GN=CYP73A12 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.890e-18
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGK--AIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGF 295
            P LVP     D  + GYDIP  + +LV+ W +  +P  W+KP EF PERF+ +   ++  G+DF  LPFG GRR CPG  L L ++  ++  L+  F
Sbjct:  372 PLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPDQWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNF 468          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.890e-18
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA--IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH 397
            P LVP     D  +AGYDIP  + +LV+ W +  +P+ W+KP EF PERF  +   ++  G+DF  +PFG GRR CPG  L L ++  ++  ++  F    P   S  +++  E  G     +F L +L H
Sbjct:  372 PLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQS--KVDTSEKGG-----QFSLHILNH 495          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
TCMO_SOYBN1.813e-1837.40Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU1.813e-1837.40Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_PETCR1.813e-1836.64Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_GLYEC2.368e-1837.40Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_POPKI3.093e-1836.64Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CICAR3.093e-1836.64Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_HELTU4.039e-1835.88Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
C79B1_SINAL4.039e-1838.13Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
TCMO_ZINEL6.890e-1841.24Trans-cinnamate 4-monooxygenase OS=Zinnia elegans ... [more]
TCMO_ARATH6.890e-1835.88Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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