CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 2
Query:   26 RAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWK 304
            RA ++D  + G  +PKGT V+V V+ + R P LW +P EF PERF  K  D   + +  LPFG G R C G    L  ++ +L  +L  F++K
Sbjct:  375 RACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLWPEPEEFRPERFSKKHKDTI-NPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP17A_PAPHU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio hamadryas ursinus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA-IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP--GNMSNEELNMEEIF 352
            VAP L+P  A  D ++  + + KGT V++++WA+  +   W +P++F PERF+  A   +       LPFGAG R C G  L  + +   +  LL  F  ++P  G + + E N + +F
Sbjct:  366 VAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF 484          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP17A_PAPCY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio cynocephalus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA-IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP--GNMSNEELNMEEIF 352
            VAP L+P  A  D ++  + + KGT V++++WA+  +   W +P++F PERF+  A   +       LPFGAG R C G  L  + +   +  LL  F  ++P  G + + E N + +F
Sbjct:  366 VAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF 484          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP17A_MACMU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca mulatta GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA-IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP--GNMSNEELNMEEIF 352
            VAP L+P  A  D ++  + + KGT V++++WA+  +   W +P++F PERF+  A   +       LPFGAG R C G  L  + +   +  LL  F  ++P  G + + E N + +F
Sbjct:  366 VAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF 484          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP17A_MACFA (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca fascicularis GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA-IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP--GNMSNEELNMEEIF 352
            VAP L+P  A  D ++  + + KGT V++++WA+  +   W +P++F PERF+  A   +       LPFGAG R C G  L  + +   +  LL  F  ++P  G + + E N + +F
Sbjct:  366 VAPMLIPHKANVDSSIGEFAVDKGTHVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSLSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGNPKVVF 484          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12
Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIG-KAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEEL 334
            V+P L+P  A  D N+  Y + KGT V+V++W++      W+ P  F PERF+  +   +       LPFGAG R+C G +L    +   L+ +L  F  ++PG     EL
Sbjct:  369 VSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLNEEGNSLCCPSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFTLEVPGGQPLPEL 479          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI---GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP 310
            VAP L+P  A  D ++  + I K T VLV++WA+  +   W++P++F PERF+   G  I V    +  LPFGAG R C G +L  + I      LL  F  ++P
Sbjct:  366 VAPILIPHKANTDSSIGEFAIDKDTNVLVNLWALHHNEQEWDRPDQFMPERFLDPTGSQIIVPSSSY--LPFGAGPRSCVGEALARQEIFLITAWLLQKFDLEVP 468          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C79F2_ARATH (Hexahomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 43/139 (30.94%), Postives = 66/139 (47.48%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERF-----IGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLS 409
            A ++ P  AR+D  + GY IPKG+ + V    +GR+P +W+ P  + PER      I K + +   +   + F  GRR C G  +G  ++   L   L GF WKL  +     L  ++   L      PL +   PRL+
Sbjct:  393 AHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLAYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMAMMLARFLQGFNWKLHRDFGPLSLEEDDASLLMAK---PLLLSVEPRLA 528          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 2
Query:   14 FLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIG--KAIDVKG-HDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAW-KLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL 406
            F +  +  E   +AGYDIP  T V   V  I   P++W  P +F P+RF+   +  D+ G  + +++PFG GRR+CPG  +    +   L  ++  F W   PG   N +++  E    +   K PL      R+
Sbjct:  368 FTLTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPG---NNKVDFSEKLEFTVVMKNPLRAKVKLRI 499          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71AS_ARATH (Putative cytochrome P450 71A28 OS=Arabidopsis thaliana GN=CYP71A28 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEK-PNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLS 409
            P  +PR   ED             V ++ WAI R    W     EF PER +   ++ +G DF  +PFG+GRR+CP       +I+  L N ++ F W++      ++  +++  G+    KFPL  +A P L+
Sbjct:  367 PLSIPRQLSED-------------VFINAWAIHRDTEKWGPYAEEFKPERHLDLPLNFQGQDFNFIPFGSGRRLCPDIDFATMLIEVGLANFVYRFNWRVETRPLGDDDGLKQT-GMEVCHKFPL--IAFPSLA 484          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
CP3AT_PIG3.312e-1239.78Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP17A_PAPHU3.312e-1232.77Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_PAPCY3.312e-1232.77Steroid 17-alpha-hydroxylase/17,20 lyase OS=Papio ... [more]
CP17A_MACMU3.312e-1232.77Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_MACFA3.312e-1232.77Steroid 17-alpha-hydroxylase/17,20 lyase OS=Macaca... [more]
CP17A_ICTPU3.312e-1234.23Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
CP17A_CAVPO5.649e-1238.10Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
C79F2_ARATH5.649e-1230.94Hexahomomethionine N-hydroxylase OS=Arabidopsis th... [more]
C77A1_SOLME5.649e-1230.37Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]
C71AS_ARATH5.649e-1229.85Putative cytochrome P450 71A28 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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