CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C97B2_SOYBN (Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11
Identity = 44/136 (32.35%), Postives = 61/136 (44.85%), Query Frame = 2
Query:   11 PFLVPRAAREDC-------NVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI--GKAIDVKG-------------------HDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEEL 334
            P L+ R+ + D           GY IP GT V +SV+ + R P  W++P++F PERF+   K  +++G                    DF  LPFG G R C G    L     +LT LL  F  +L G   + EL
Sbjct:  418 PLLIRRSLKSDVLPGGHKGEKDGYAIPAGTDVFISVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGLDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVEL 553          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11
Identity = 35/110 (31.82%), Postives = 50/110 (45.45%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI------------GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAW 301
            AP  +PR A ED  V GY IPKGT V++SV+ +      W+ P+ F PER++            G  +         +PFG G RMC G  +    +    + +   F W
Sbjct:  352 APLALPRIASEDIKVGGYTIPKGTQVMMSVYGMASDERYWKDPHIFNPERWLSSNHSTENGGGGGGVVGNSSQSEVFIPFGVGPRMCVGMGVAKDELYYCASQMFMNFKW 461          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C516A_DICDI (Probable cytochrome P450 516A1 OS=Dictyostelium discoideum GN=cyp516a1 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11
Identity = 34/119 (28.57%), Postives = 62/119 (52.10%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLS 361
            V    +PR A ED     Y I KG+ ++++V+ +   P++WE P  F P R++    D+    +  +PFG G R+C G SL    I   + N+L  + ++   + + + +N +  FG++
Sbjct:  361 VGALSLPRIASEDVTCGPYTIEKGSQIIMNVYGLAMDPTVWEDPETFNPYRWLSS--DISQSTYSFIPFGCGSRVCVGSSLARDEIFLGIGNILLNYIFE---SQNGKPINEKGHFGIA 474          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C513D_DICDI (Probable cytochrome P450 513D1 OS=Dictyostelium discoideum GN=cyp513d1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11
Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLS 361
            AP  VP    EDC + GY I KGT V+ ++++     S    P EF PERF+    + K     ++ FG G+R CPG ++    I   L  L+  F +  P +  N +LN    FGLS
Sbjct:  395 APLSVPHLLTEDCEIQGYKIAKGTQVIQNIYSTHLSQSFCSNPLEFSPERFLDSTNEPK-----IITFGIGQRKCPGENIFEIEIYIFLVYLIKKFKFSHPID-DNLQLNDRGQFGLS 506          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C508D_DICDI (Probable cytochrome P450 508D1 OS=Dictyostelium discoideum GN=cyp508d1 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11
Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGF 295
            APF +P    +D  V G+ IPK + VL++ +++GR+P  +  P +F P RFIG   D        +PFG G R C G +LG+  I   L+N+   F
Sbjct:  360 APFGLPHTTDQDIIVKGHFIPKDSMVLINFYSLGRNPKDFPDPLKFDPNRFIGSTPD------SFMPFGTGPRNCIGQALGMDQIYLLLSNIFLNF 449          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
C97B2_SOYBN8.157e-1132.35Cytochrome P450 97B2 OS=Glycine max GN=CYP97B2 PE=... [more]
C516B_DICDI8.157e-1131.82Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]
C516A_DICDI8.157e-1128.57Probable cytochrome P450 516A1 OS=Dictyostelium di... [more]
C513D_DICDI8.157e-1135.59Probable cytochrome P450 513D1 OS=Dictyostelium di... [more]
C508D_DICDI8.157e-1137.50Probable cytochrome P450 508D1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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