CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6359 contig Csv1_Contig6359:29..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.385e-26
Identity = 61/135 (45.19%), Postives = 85/135 (62.96%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI---GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSP 412
            LV R + +   V GYDIP  T + V+VWAIGR P+ WEKP EF PERFI      +DV+G  +  +PFG+GRR CPG SL  +V+  +L  ++  F WKL G   N +++MEE  G++ PR  P+  +  PR++P
Sbjct:  373 LVVRESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVG--GNGKVDMEEKSGITLPRANPIICVPVPRINP 505          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.809e-26
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLW-EKPNEFYPERFIG--KAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 373
            V P L+ R    D  + GYDIP  T + V+ WA+ R  + W + PNEF PERF+   K +D KG DFELLPFG+GRRMCP   LG+ +++    NLL+ F W LP  +  E++ M+ + GL+  +K
Sbjct:  363 VIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMNEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKK 488          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.809e-26
Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHP 400
            P LVPR  R++  + GY IP  T V+V+VWA+GR P  W+    F PERF   +ID  G++FE LPFG GRR+CPG S GL      L  LL  F WKLP  M  ++L++ E+ G+S   K  L ++A P
Sbjct:  369 PLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKDDLYLIATP 498          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.362e-26
Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 2
Query:   50 VAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI--GKA-IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSP 412
            V GYDIP  T + V+VWAIGR P+ WE P EF PERF+  GK+ +DV+G  + LLPFG+GRR CPG SL L+V+  +L  L+  F WK+  +  N ++NMEE  G++ PR  P+  +   RL+P
Sbjct:  385 VCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKV--DCDNGKVNMEEKAGITLPRAHPIICVPIRRLNP 506          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.085e-26
Identity = 50/100 (50.00%), Postives = 72/100 (72.00%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLP 310
            PFL+PR       + GYDIP  T ++++V+AI R P LW  P+EF P+RF+  +ID KG +FELLPFG+GRR+CPG ++G+ +++ +L NLL+ F W LP
Sbjct:  367 PFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGLP 466          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.263e-26
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHP 400
            V P L+P   RE C + GY+I +GT VL++ WA+ R P  W+   +F PERF     D KG  FE LPFG GRR CPG    +  ++  +  LL+ F W LP  M   +++ME + G +  RK  L+++A P
Sbjct:  363 VLPLLLPHLCRETCEIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLVASP 494          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.263e-26
Identity = 52/125 (41.60%), Postives = 78/125 (62.40%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNE-FYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPL 382
            P +VP  + +D  +  Y IP GT V+++ WAIGR  + W    E F PER +  ++D +GH+FEL+PFGAGRR+CP  S  + +I+ +L NL+H + W+LP     ++ N+ E  G+   R FPL
Sbjct:  358 PLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPL 482          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.977e-26
Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAI-DVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL 406
            P L+   A ED ++ G+ IPK + V+++ +AIGR P+ W  P+ F P RF+   + D KG +FE +PFG+GRR CPG  LGL  +  ++ ++LH F WKLP  M   EL+M ++FGL+ P+   L  +   RL
Sbjct:  385 PLLLHETA-EDTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVPTTRL 516          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.977e-26
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 373
            P L+PR  RE C + GY IP  + V+V+ WAIGR P+ W +P +F P+RF+   +D KG+ FE LPFG GRR+CPG +  L  I+  L  LL  F W+     + E+LNM+E  G++  R+
Sbjct:  363 PLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ----SNTEKLNMKESRGVTVRRE 479          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFI----GKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNE--ELNMEEIFGLSTPR 370
            P L+P  +  DC + GY IP    VLV+ WAIGR P++WEKP EF PERF+     K+    G DF  LPFG+GRR+CPG + GL  ++  L NL++ F W++P    +   +++M+E FGL   R
Sbjct:  398 PLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRR 523          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
C93A1_SOYBN1.385e-2645.19Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C83B1_ARATH1.809e-2644.44Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71D6_SOLCH1.809e-2646.15Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C93A3_SOYBN2.362e-2649.19Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BT_ARATH3.085e-2650.00Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ5.263e-2640.91Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C71AM_ARATH5.263e-2641.60Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH8.977e-2642.11Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71DC_CATRO8.977e-2644.63Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71C3_MAIZE1.172e-2544.44Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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