CN189092

Overview
NameCN189092
Unique NameCN189092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6359 contig Csv1_Contig6359:29..626. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.172e-25
Identity = 49/109 (44.95%), Postives = 73/109 (66.97%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEEL 334
            AP L+PR       + GYDIP  T ++++ +AI R P LW  P+EF P+RF+  +ID +G +FELLPFG+GRR+CPG ++G+ +++  L NLL+ F W LP     +E+
Sbjct:  366 APLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGLPEKEEAKEI 474          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25
Identity = 56/136 (41.18%), Postives = 84/136 (61.76%), Query Frame = 2
Query:    5 VAPFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHD---FELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 403
            VAPFL+PR+  +D  + GYD+P+ T V+V+ WAI R P +WE+P +F P+R+     D  G D   ++L+PFG GRR CPG  LG +++  +L +L+  F W+   N+  EE++M E  GL   +  PL  +  PR
Sbjct:  364 VAPFLIPRSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRY----NDGCGSDYYVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWE---NVKGEEMDMSESTGLGMRKMDPLRAMCRPR 492          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25
Identity = 58/131 (44.27%), Postives = 81/131 (61.83%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPL---EVLAHP 400
            LV R  R+ C + GY IP  + VLV+ +AIG     W +P  F PERFI  +ID KG +FE LPFGAGRR+CPG + G+  ++  L  LL+ F W LP  + NE+L++ E FG++  +K  L     ++HP
Sbjct:  356 LVFRECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLIPSISHP 486          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.531e-25
Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNE-FYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLA 394
            P L P  + +D  +  Y IP GT V+++ WAIGR  + W    E F PER +  ++D +GH+FEL+PFGAGRR+CP  S  + +I+ +L N +H + WKLP +    + N+ E  G+   R FPL  +A
Sbjct:  358 PLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKENQTNVAESTGMVIHRLFPLYAIA 486          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25
Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 2
Query:   17 LVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA---IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSP 412
            L+ R + +   V GY+IP  T + V+VWAIGR P+ WE P EF PERF       +DV+G  +  +PFG+GRR CPG SL L+++  +L  ++  F WK   +  N +++MEE  G++ PR  P+  +  PRL+P
Sbjct:  366 LIVRESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKF--DNGNNKVDMEEKSGITLPRAHPIICVPVPRLNP 498          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25
Identity = 50/127 (39.37%), Postives = 80/127 (62.99%), Query Frame = 2
Query:    8 APFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKA----IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNM--SNEELNMEEIFGLSTPR 370
            APFL+P  +  DC + GY IP GT V+V+ WA+ R P+ W+K  EF+PERF+ +     +D+ G D   +PFGAGRR+C G +  +  ++  L NL++ F W++P  M  +  +++M + FG++  R
Sbjct:  392 APFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRR 518          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.612e-25
Identity = 54/131 (41.22%), Postives = 77/131 (58.78%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWE-KPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHP 400
            P LVPR   ED  + GYDI  GT V+++ WAI R    W     EF PER +   +D +G +FE +PFG+GRR+CPG    + +++ +L NL++ F W++    S +E ++ E  GL   RKFPL V   P
Sbjct:  366 PLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFPSP 496          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.296e-24
Identity = 50/125 (40.00%), Postives = 76/125 (60.80%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLW-EKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPL 382
            P ++PR   ED  V GY+I  GT V+++ WAI R P++W     EF PER +   +D  G D   +PFG+GRR+CPG +L L +++ ++ NL+  F W+     + ++ ++ E FGL   RKFPL
Sbjct:  365 PLILPRLLSEDVKVKGYNIAAGTEVIINAWAIQRDPAIWGPDAEEFKPERHLDSTLDYHGKDLNFIPFGSGRRICPGINLALGLVEVTVANLVGRFDWRAEAGPNGDQPDLTEAFGLDVCRKFPL 489          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.211e-24
Identity = 50/115 (43.48%), Postives = 76/115 (66.09%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLWEKPNEFYPERFIGKAIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEE-LNMEEIF 352
            P L+PR       + GYD+P  T +LV+V+A+GR P LWE  +EF P+RF+  ++D KG ++E +PFG+GRR+CPG ++G  +++ +L NLL+ F W L      +E +N EE F
Sbjct:  367 PLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWENADEFNPDRFLDSSVDFKGKNYEFIPFGSGRRICPGMTMGTILVEMALLNLLYFFDWGLAKQEEAKEIINGEENF 481          
BLAST of CN189092 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.772e-24
Identity = 62/138 (44.93%), Postives = 86/138 (62.32%), Query Frame = 2
Query:   11 PFLVPRAAREDCNVAGYDIPKGTPVLVSVWAIGRHPSLW-EKPNEFYPERFIG---KAIDVKG--HDFELLPFGAGRRMCPGYSLGLKVIQASLTNLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL 406
            P  +P  + E   V GY IPK T V++++WAIGR PS+W    +EF PERF+      ID+ G   DF +LPFGAGRR CPG ++ +  ++ +L  LLH F W++ G+ S  EL+M+E      PR+ PL  LA+PRL
Sbjct:  386 PLALPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEGDPS--ELDMKEACATKMPRQTPL--LAYPRL 519          
The following BLAST results are available for this feature:
BLAST of CN189092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
C71BS_ARATH1.172e-2544.95Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C81F1_ARATH1.531e-2541.18Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C71DB_LOTJA1.531e-2544.27Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AL_ARATH1.531e-2541.09Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN2.612e-2541.48Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71C1_MAIZE2.612e-2539.37Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C71AE_ARATH2.612e-2541.22Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.296e-2440.00Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BF_ARATH2.211e-2443.48Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PINTA3.772e-2444.93Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E22_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189092 ID=CN189092; Name=CN189092; organism=Citrus sinensis; type=EST; length=598bp
GAGGGTGGCTCCTTTCCTAGTGCCCCGAGCGGCTAGAGAAGATTGCAACG
TAGCCGGCTACGACATCCCAAAAGGCACTCCAGTCCTTGTTAGTGTATGG
GCGATTGGGAGACACCCAAGTTTGTGGGAAAAGCCAAATGAATTTTATCC
TGAGAGATTTATTGGAAAAGCAATTGATGTGAAAGGGCATGATTTTGAGC
TGCTGCCATTTGGGGCTGGGAGAAGAATGTGTCCAGGGTACAGTCTCGGC
CTTAAGGTTATTCAAGCAAGCTTAACTAATCTTTTGCATGGATTTGCATG
GAAATTGCCAGGAAATATGAGCAACGAGGAGCTGAATATGGAGGAAATTT
TTGGGCTTTCTACCCCGAGAAAGTTTCCACTTGAGGTTCTGGCTCACCCA
AGGCTTTCGCCCCATCTTTACAATCTGTGATTGTGGCTTCCAAAATAATT
AATTACGGCGTAGCGTACTTTTGAGTAAGTGGTTTGTTAGTGCGAAAAGG
CCATGGATTTGCACATGTAATGAGATTTTAAACCCAAACTAACGTGCGCT
GCTGTTTGGCCCCAAATAACGCGTCATCTTTTGATATATAATCTTTTT
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