CN189069

Overview
NameCN189069
Unique NameCN189069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_GADOC (Protein transport protein Sec61 subunit alpha OS=Gadus ogac GN=sec61a PE=2 SV=3)

HSP 1 Score: 243.817 bits (621), Expect = 5.340e-74
Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L +++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  ++II+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLVIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 55.8398 bits (133), Expect = 5.340e-74
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAFSPTT+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_ONCMY (Protein transport protein Sec61 subunit alpha isoform A OS=Oncorhynchus mykiss GN=sec61aa PE=2 SV=3)

HSP 1 Score: 243.817 bits (621), Expect = 5.340e-74
Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L +++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G++I IG+++ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 55.8398 bits (133), Expect = 5.340e-74
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAFSPTT+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_BOVVA (Protein transport protein Sec61 subunit alpha OS=Bovichtus variegatus GN=sec61a PE=2 SV=3)

HSP 1 Score: 244.202 bits (622), Expect = 1.185e-73
Identity = 120/178 (67.42%), Postives = 147/178 (82.58%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L  ++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGIAPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 54.299 bits (129), Expect = 1.185e-73
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAF PTT+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKAFGPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_DANRE (Protein transport protein Sec61 subunit alpha-like 1 OS=Danio rerio GN=sec61al1 PE=2 SV=3)

HSP 1 Score: 242.662 bits (618), Expect = 1.185e-73
Identity = 119/176 (67.61%), Postives = 148/176 (84.09%), Query Frame = 2 
Query:  155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            + L +++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    4 KFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 55.8398 bits (133), Expect = 1.185e-73
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAFSPTT+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_HEMAM (Protein transport protein Sec61 subunit alpha OS=Hemitripterus americanus GN=sec61a PE=2 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 1.545e-73
Identity = 119/178 (66.85%), Postives = 148/178 (83.15%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L +++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KII V  +  +DRAL NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIGV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 55.8398 bits (133), Expect = 1.545e-73
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAFSPTT+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A2_PONAB (Protein transport protein Sec61 subunit alpha isoform 2 OS=Pongo abelii GN=SEC61A2 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 3.427e-73
Identity = 119/178 (66.85%), Postives = 149/178 (83.71%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L +++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G++I IG+A+ YVM+GMYG  +++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 53.1434 bits (126), Expect = 3.427e-73
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKA SPTTIN+G G+   G
Sbjct:  178 GISLFIATNICETIVWKASSPTTINTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A2_DANRE (Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio GN=sec61al2 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 7.602e-73
Identity = 117/176 (66.48%), Postives = 148/176 (84.09%), Query Frame = 2 
Query:  155 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            + L +++PF   LPE+Q  +R+I F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVI+ASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G++I IG+AV YVM+GMYG  S++GAG  +LII+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    4 KFLEVIKPFCAVLPEIQKPERRIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMIITIGQAVVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 55.8398 bits (133), Expect = 7.602e-73
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAFSPTT+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKAFSPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_HALRO (Protein transport protein Sec61 subunit alpha OS=Halocynthia roretzi PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.914e-73
Identity = 119/178 (66.85%), Postives = 147/178 (82.58%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            GF+ L +++PF   LPE++   RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVI+ASNRGT+MELGITPIVTSGL+MQLLAG+K+IEV  +  +DRAL NGAQKL G++I IG+AV YVM+GMYG  S +GAG  +LII+QL  A +IV+ LDELLQKGYGLGSG
Sbjct:    2 GFKFLEVIKPFCIILPEIEKPQRKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSESADPFYWMRVIMASNRGTLMELGITPIVTSGLIMQLLAGAKLIEV-GDTPKDRALFNGAQKLFGMIITIGQAVVYVMTGMYGDPSDMGAGICLLIIIQLFIASLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 52.7582 bits (125), Expect = 9.914e-73
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WK+FSP T+N+G G+   G
Sbjct:  178 GISLFIATNICETIVWKSFSPATVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: SC61A_BORSA (Protein transport protein Sec61 subunit alpha OS=Boreogadus saida GN=sec61a PE=2 SV=3)

HSP 1 Score: 241.506 bits (615), Expect = 1.293e-72
Identity = 118/178 (66.29%), Postives = 149/178 (83.71%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L +++PF   LPE+Q  +RKI FREKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTS L+MQLLAG+KIIEV ++ + DRAL NGAQKL G++I IG+A+ YVM+GMYG  S++GAG  ++II+QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSDLIMQLLAGAKIIEVGDSPK-DRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPSEMGAGICLVIIIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 53.5286 bits (127), Expect = 1.293e-72
Identity = 23/34 (67.65%), Postives = 28/34 (82.35%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISL IA NICE+I+WKAFSPTT+N+G G+   G
Sbjct:  178 GISLLIATNICETIVWKAFSPTTVNTGRGTEFEG 211
[Close]
BLAST of CN189069 vs. ExPASy Swiss-Prot
Match: S61A1_BOVIN (Protein transport protein Sec61 subunit alpha isoform 1 OS=Bos taurus GN=SEC61A1 PE=2 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 1.686e-72
Identity = 117/178 (65.73%), Postives = 147/178 (82.58%), Query Frame = 2 
Query:  149 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSG 682
            G + L +++PF   LPE+Q  +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+  ADPFYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV  +  +DRAL NGAQKL G+ I IG+++ YVM+GMYG  S++GAG  +LI +QL  AG+IV+ LDELLQKGYGLGSG
Sbjct:    2 GIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEV-GDTPKDRALFNGAQKLFGMTITIGQSIVYVMTGMYGDPSEMGAGVCLLITIQLFVAGLIVLLLDELLQKGYGLGSG 178

HSP 2 Score: 55.0694 bits (131), Expect = 1.686e-72
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 3 
Query:  681 GISLFIAPNICESIIWKAFSPTTINSGPGS*IRG 782
            GISLFIA NICE+I+WKAFSPTT+N+G G    G
Sbjct:  178 GISLFIATNICETIVWKAFSPTTVNTGRGMEFEG 211
The following BLAST results are available for this feature:
BLAST of CN189069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
SC61A_GADOC5.340e-7466.85Protein transport protein Sec61 subunit alpha OS=G... [more]
S61A1_ONCMY5.340e-7466.85Protein transport protein Sec61 subunit alpha isof... [more]
SC61A_BOVVA1.185e-7367.42Protein transport protein Sec61 subunit alpha OS=B... [more]
S61A1_DANRE1.185e-7367.61Protein transport protein Sec61 subunit alpha-like... [more]
SC61A_HEMAM1.545e-7366.85Protein transport protein Sec61 subunit alpha OS=H... [more]
S61A2_PONAB3.427e-7366.85Protein transport protein Sec61 subunit alpha isof... [more]
S61A2_DANRE7.602e-7366.48Protein transport protein Sec61 subunit alpha-like... [more]
SC61A_HALRO9.914e-7366.85Protein transport protein Sec61 subunit alpha OS=H... [more]
SC61A_BORSA1.293e-7266.29Protein transport protein Sec61 subunit alpha OS=B... [more]
S61A1_BOVIN1.686e-7265.73Protein transport protein Sec61 subunit alpha isof... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189069 ID=CN189069; Name=CN189069; organism=Citrus sinensis; type=EST; length=798bp
GAGGAAGGGTTTTATAATATTTCAACGTTCAACCCTCTATCCTCCATCTT
GCATCGTTGGAGTTGGTGTTGCCACTGATTCCGAGCCTCTGCTCAAAGTC
AAAGCTTGTCGATCTATTCAGATCTGCTCATTTTTGAAAATGGGAGGAGG
ATTTAGAGTGCTGCATTTGGTGAGACCATTTCTTCCATTTTTGCCGGAGG
TTCAGTCAGCTGACAGGAAAATTCCCTTCCGAGAGAAGGTGATCTACACT
GTCATTTCACTTTTCATCTTTCTGGTATGCAGTCAGCTTCCACTTTATGG
CATCCATTCCACCACCGGTGCTGATCCCTTTTATTGGATGCGTGTTATTC
TTGCATCAAACCGGGGAACTGTGATGGAACTTGGGATTACCCCCATTGTG
ACTTCTGGACTTGTGATGCAACTCTTGGCTGGGTCCAAGATTATTGAGGT
GGATAACAATGTTCGTGAGGATCGTGCGCTCTTAAATGGGGCACAGAAGC
TGTTGGGCATCCTGATTGCTATCGGTGAGGCTGTTGCCTACGTGATGTCG
GGGATGTATGGAAGTGTCAGCCAGCTTGGTGCTGGGAATGCTATTCTCAT
AATCCTCCAACTTTGCTTTGCTGGAATCATTGTGATATGCCTGGATGAAC
TTCTGCAGAAGGGATATGGTTTGGGCTCTGGGAATCTCCCTTTTCATAGC
CCCTAACATTTGTGAAAGCATTATTTGGAAAGCTTTTAGCCCCACAACCA
TAAACAGTGGCCCGGGGAGCTGAATTCGAGGGTGCTGTTATTGCTCTG
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