CN189059

Overview
NameCN189059
Unique NameCN189059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: IREB2_HUMAN (Iron-responsive element-binding protein 2 OS=Homo sapiens GN=IREB2 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.077e-41
Identity = 79/163 (48.47%), Postives = 111/163 (68.10%), Query Frame = -2
Query:  222 SVLLTSS*MGKWVQRRSMFQQGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIR 710
            ++ L +  +GK   +   F  G+ L VF+AA  Y+  G   IILAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F  GE+ADSLGL+G E FS+  P ++S   PG  + + T +GK F+    F+ +VE+  + HGG+L FV R
Sbjct:  801 NIKLFNKFIGKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLQFLPGENADSLGLSGRETFSLTFPEELS---PGITLNIQTSTGKVFSVIASFEDDVEITLYKHGGLLNFVAR 960          

HSP 2 Score: 35.039 bits (79), Expect = 1.077e-41
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -3
Query:  719 RDFNS*GSRRGNDEVMARGNF 781
            R+FNS G+RRGND VM RG F
Sbjct:  779 REFNSYGARRGNDAVMTRGTF 799          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: ACON_CORDI (Aconitate hydratase OS=Corynebacterium diphtheriae GN=acn PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.210e-41
Identity = 84/158 (53.16%), Postives = 103/158 (65.19%), Query Frame = -2
Query:  213 RSMFQQGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPG-----QDVTVTTDSGK--SFTCTVRFDTEVELAYFDHGGILPFVIRNLI 665
            R   + GE+  +FDA   YK+AG   +++AG EYG+GSSRDWAAKG  LLGVKAVI +SFERIHRSNL+GMG+IPL F AGE   SLGL G E F I+    I E+  G       VT T +SG    F   VR DT  E  Y+ +GGIL +V+RN+I
Sbjct:  778 RDFTKNGEQAFIFDACQNYKAAGIPLVVIAGKEYGTGSSRDWAAKGTNLLGVKAVITESFERIHRSNLIGMGVIPLQFPAGESHASLGLDGTETFDIE---GIEELNNGVTPKTVHVTATKESGDQVEFDAVVRIDTPGEADYYRNGGILQYVLRNMI 932          

HSP 2 Score: 35.8094 bits (81), Expect = 1.210e-41
Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = -3
Query:  719 RRDFNS*GSRRGNDEVMARGNF 784
            R D+NS GSRRGN EVM RG F
Sbjct:  739 RNDYNSLGSRRGNHEVMMRGTF 760          

HSP 3 Score: 25.0238 bits (53), Expect = 1.210e-41
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  685 LEGTFANIRLVNKLLN 732
            + GTFANIRL N+L++
Sbjct:  756 MRGTFANIRLQNQLVD 771          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: IREB2_MOUSE (Iron-responsive element-binding protein 2 OS=Mus musculus GN=Ireb2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.103e-41
Identity = 79/166 (47.59%), Postives = 110/166 (66.27%), Query Frame = -2
Query:  213 SVLLTSS*MGKWVQRRSMFQQGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 710
            ++ L +  +GK   +   F  G+ L VF+AA  Y+  G   IILAG +YGSG+SRDWAAKGP LLGVKAV+A+S+E+IH+ +L+G+GI PL F  GE+ADSLGL+G E FS+  P    E+ PG  + + T +GK F+    F  +VE+  + HGG+L FV R  +
Sbjct:  801 NIKLFNKFIGKPAPKTIHFPSGQTLDVFEAAELYQKEGIPLIILAGKKYGSGNSRDWAAKGPYLLGVKAVLAESYEKIHKDHLIGIGIAPLEFLPGENADSLGLSGREVFSLSFP---EELFPGITLNIKTSTGKEFSVIASFANDVEITLYKHGGLLNFVARKFL 963          

HSP 2 Score: 35.039 bits (79), Expect = 3.103e-41
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -3
Query:  719 RDFNS*GSRRGNDEVMARGNF 781
            R+FNS G+RRGND VM RG F
Sbjct:  779 REFNSYGARRGNDAVMTRGTF 799          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: ACON_COREF (Aconitate hydratase OS=Corynebacterium efficiens GN=acn PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 4.769e-40
Identity = 76/148 (51.35%), Postives = 99/148 (66.89%), Query Frame = -2
Query:  216 GEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQ--DVTVTTDSGK--SFTCTVRFDTEVELAYFDHGGILPFVIRNL 647
            G +  ++DA + YK AG   ++LAG EYG+GSSRDWAAKG  LLGV+AVI +SFERIHRSNL+GMG++PL F  GE  +SLGL G E F I   + ++E    +   VT T ++G+   F   VR DT  E  YF HGGIL +V+R +
Sbjct:  787 GPQAFIYDACVNYKEAGIPLVVLAGKEYGTGSSRDWAAKGTNLLGVRAVITESFERIHRSNLIGMGVVPLQFPEGESHESLGLDGTETFDITGLTALNEGTTPKTVKVTATKENGEKVEFDAVVRIDTPGEADYFRHGGILQYVLRQM 934          

HSP 2 Score: 38.1206 bits (87), Expect = 4.769e-40
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = -3
Query:  719 ERRDFNS*GSRRGNDEVMARGNF 787
            ER+D+NS GSRRGN EVM RG F
Sbjct:  740 ERQDYNSLGSRRGNHEVMMRGTF 762          

HSP 3 Score: 25.0238 bits (53), Expect = 4.769e-40
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  685 LEGTFANIRLVNKLLN 732
            + GTFANIRL N+L++
Sbjct:  758 MRGTFANIRLQNQLVD 773          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: ACON_CORGL (Aconitate hydratase OS=Corynebacterium glutamicum GN=acn PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.771e-39
Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = -2
Query:  216 RSMFQQGEKLS-VFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQ--DVTVTTDSGK--SFTCTVRFDTEVELAYFDHGGILPFVIRNL 665
            R   Q+G   + ++DA++ YK+AG   ++L G EYG+GSSRDWAAKG  LLG++AVI +SFERIHRSNL+GMG++PL F AGE  +SLGL G E F I   + ++E    +   VT T ++G    F   VR DT  E  Y+ HGGIL +V+R +
Sbjct:  780 RDFTQEGAPQAFIYDASVNYKAAGIPLVVLGGKEYGTGSSRDWAAKGTNLLGIRAVITESFERIHRSNLIGMGVVPLQFPAGESHESLGLDGTETFDITGLTALNEGETPKTVKVTATKENGDVVEFDAVVRIDTPGEADYYRHGGILQYVLRQM 934          

HSP 2 Score: 37.7354 bits (86), Expect = 1.771e-39
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = -3
Query:  719 ERRDFNS*GSRRGNDEVMARGNF 787
            ER D+NS GSRRGN EVM RG F
Sbjct:  740 ERHDYNSLGSRRGNHEVMMRGTF 762          

HSP 3 Score: 25.0238 bits (53), Expect = 1.771e-39
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = -1
Query:  685 LEGTFANIRLVNKLLN 732
            + GTFANIRL N+L++
Sbjct:  758 MRGTFANIRLQNQLVD 773          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: ACON_BRAJA (Aconitate hydratase OS=Bradyrhizobium japonicum GN=acnA PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.303e-39
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = -2
Query:  216 GEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSG----KSFTCTVRFDTEVELAYFDHGGILPFVIRNL 647
            GE++S++DAAMKY+      ++ AGAEYG+GSSRDWAAKG  LLGV+AVI +SFERIHRSNLVGMG++PL F+ G    SLGL G E+  + L   + +++P Q +T    SG    +  +   R DT  EL Y+ +GGIL +V+R L
Sbjct:  759 GEQMSIYDAAMKYQQEQVPLVVFAGAEYGNGSSRDWAAKGTRLLGVRAVICQSFERIHRSNLVGMGVLPLTFEEGTSWSSLGLKGDEK--VTLRGLVGDLKPRQKLTAEIVSGDGSLQRVSLLCRIDTLDELDYYRNGGILHYVLRKL 904          

HSP 2 Score: 32.3426 bits (72), Expect = 2.303e-39
Identity = 14/20 (70.00%), Postives = 15/20 (75.00%), Query Frame = -3
Query:  719 DFNS*GSRRGNDEVMARGNF 778
            DFN  G+RRGN EVM RG F
Sbjct:  711 DFNQYGTRRGNHEVMMRGTF 730          

HSP 3 Score: 29.261 bits (64), Expect = 2.303e-39
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = -1
Query:  637 LEGTFANIRLVNKLLNGEVGPKTVHVPTGGET 732
            + GTFANIR+ N +L G  G    ++P GG T
Sbjct:  726 MRGTFANIRIKNFMLKGADG----NIPEGGLT 753          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: IREB2_XENLA (Iron-responsive element-binding protein 2 OS=Xenopus laevis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.788e-39
Identity = 74/158 (46.84%), Postives = 106/158 (67.09%), Query Frame = -2
Query:  213 MGKWVQRRSMFQQGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 686
            +GK   +      G+ + VFDAA  Y+ +    II+AG +YG G+SRDWAAKGP LLGV+ VIA+S+E+IH+ +LVGMGI PL F +GE+A++LGL+G E++S+ LP    ++ PG  V + T++GK F     FD E E+  + HGGIL +V R  +
Sbjct:  801 VGKTGPKTIHLPSGQTMDVFDAAELYQRSEIPLIIIAGKKYGLGNSRDWAAKGPFLLGVRVVIAESYEKIHKDHLVGMGIAPLQFLSGENAETLGLSGKEQYSLSLP---VDLTPGHKVEIKTNTGKIFHVIAAFDNEAEVTLYKHGGILSYVARKYL 955          

HSP 2 Score: 35.039 bits (79), Expect = 2.788e-39
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -3
Query:  719 RDFNS*GSRRGNDEVMARGNF 781
            R+FNS G+RRGND VM RG F
Sbjct:  771 REFNSYGARRGNDAVMTRGTF 791          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: ACON1_PSEAE (Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN=acnA PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.634e-39
Identity = 80/149 (53.69%), Postives = 105/149 (70.47%), Query Frame = -2
Query:  213 GEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQ--DVTVTTDSGK--SFTCTVRFDTEVELAYFDHGGILPFVIRNLI 647
            GEKL+++DAAM+Y+  G   +I+AG EYG+GSSRDWAAKG  LLGVKAVIA+SFERIHRSNLVGMG++PL F+ G+D  SL LTG E   +++     E++P     V VT + G   SF    R DT  E+ YF  GGIL +V+R+++
Sbjct:  764 GEKLAIYDAAMRYQEDGTPLVIVAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFENGQDRKSLKLTGKE--VLNIRGLGGELKPHMPLSVEVTREDGSQDSFKVLCRIDTLNEVEYFKAGGILHYVLRSML 910          

HSP 2 Score: 36.965 bits (84), Expect = 3.634e-39
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = -3
Query:  719 ERRDFNS*GSRRGNDEVMARGNF 787
            E +DFNS GSRRGN EVM RG F
Sbjct:  718 EPKDFNSYGSRRGNHEVMMRGTF 740          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: IREB2_CHICK (Iron-responsive element-binding protein 2 OS=Gallus gallus GN=IREB2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.732e-39
Identity = 76/166 (45.78%), Postives = 109/166 (65.66%), Query Frame = -2
Query:  213 SVLLTSS*MGKWVQRRSMFQQGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 710
            ++ L +  +GK   +   F  G+ L VF+AA  Y+  G   IILAG +YG GSSRDWAAKGP LLGVKAV+A+S+E++H+S L+G+GI PL F  GE+ ++LGLTG E+FSI  P ++S   P   + + T +GK F+    F+ +VE+  + +GG L FV R  +
Sbjct:  803 NIKLLNKFIGKPAPKTIHFPSGQTLDVFEAAELYQKEGIPVIILAGKKYGLGSSRDWAAKGPFLLGVKAVLAESYEKVHKSQLIGIGIAPLQFLPGENPNTLGLTGREQFSILFPPELS---PKMTLDIKTSTGKVFSVFALFENDVEITLYKNGGSLNFVARRFL 965          

HSP 2 Score: 35.039 bits (79), Expect = 4.732e-39
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -3
Query:  719 RDFNS*GSRRGNDEVMARGNF 781
            R+FNS G+RRGND VM RG F
Sbjct:  781 REFNSYGARRGNDAVMTRGTF 801          
BLAST of CN189059 vs. ExPASy Swiss-Prot
Match: IREB2_XENTR (Iron-responsive element-binding protein 2 OS=Xenopus tropicalis GN=ireb2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.776e-38
Identity = 73/158 (46.20%), Postives = 105/158 (66.46%), Query Frame = -2
Query:  213 MGKWVQRRSMFQQGEKLSVFDAAMKYKSAGHGTIILAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADSLGLTGHERFSIDLPSKISEIRPGQDVTVTTDSGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLI 686
            +GK   +      G+ + VFDAA  Y+ A    II+AG +YG G+SRDWAAKGP LLGV+ VIA+S+E+IH+ +LVGMGI PL F +GE+A++LGL+  E++S  LP    ++ P   + V T++GK+F     FD E E+ ++ HGGIL +V R  +
Sbjct:  803 VGKTGPKTFHLPSGQIMDVFDAAELYQKAEIPLIIIAGKKYGLGNSRDWAAKGPFLLGVRVVIAESYEKIHKDHLVGMGIAPLQFLSGENAETLGLSAKEQYSFSLP---VDLTPRHKIEVKTNTGKTFHVIAAFDNEAEVTFYKHGGILSYVARKYL 957          

HSP 2 Score: 35.039 bits (79), Expect = 1.776e-38
Identity = 15/21 (71.43%), Postives = 17/21 (80.95%), Query Frame = -3
Query:  719 RDFNS*GSRRGNDEVMARGNF 781
            R+FNS G+RRGND VM RG F
Sbjct:  773 REFNSYGARRGNDAVMTRGTF 793          
The following BLAST results are available for this feature:
BLAST of CN189059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
IREB2_HUMAN1.077e-4148.47Iron-responsive element-binding protein 2 OS=Homo ... [more]
ACON_CORDI1.210e-4153.16Aconitate hydratase OS=Corynebacterium diphtheriae... [more]
IREB2_MOUSE3.103e-4147.59Iron-responsive element-binding protein 2 OS=Mus m... [more]
ACON_COREF4.769e-4051.35Aconitate hydratase OS=Corynebacterium efficiens G... [more]
ACON_CORGL1.771e-3949.03Aconitate hydratase OS=Corynebacterium glutamicum ... [more]
ACON_BRAJA2.303e-3950.68Aconitate hydratase OS=Bradyrhizobium japonicum GN... [more]
IREB2_XENLA2.788e-3946.84Iron-responsive element-binding protein 2 OS=Xenop... [more]
ACON1_PSEAE3.634e-3953.69Aconitate hydratase 1 OS=Pseudomonas aeruginosa GN... [more]
IREB2_CHICK4.732e-3945.78Iron-responsive element-binding protein 2 OS=Gallu... [more]
IREB2_XENTR1.776e-3846.20Iron-responsive element-binding protein 2 OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001E02_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189059 ID=CN189059; Name=CN189059; organism=Citrus sinensis; type=EST; length=789bp
GAGGAAAGAATTGTATTACTGAAAATAATTCTTCGTTCACAGAACAAAGA
TATCGACCTTTTGAATTGTTCCCAGAAAAAAAGACTCAAGTCCCATCAAA
GGGATCTTTCTTACATTATTTGAACTTTATTCAACTCTCACATTTTACAA
CCGTAAGTTTCTTTGGATGAAGCAAGTCCGCCTAGTAGAAATGATGCAGT
TATTTACTGCTTAATCAGGTTGCGAATGACAAACGGAAGGATGCCTCCAT
GATCAAAGTAAGCCAATTCTACCTCTGTGTCAAAACGGACTGTGCAGGTA
AAGGATTTTCCACTGTCAGTGGTGACAGTCACATCTTGGCCAGGTCTTAT
TTCACTGATCTTACTTGGGAGATCAATACTAAATCTCTCATGACCAGTCA
AACCCAATGAGTCTGCATCCTCACCAGCCTTGAAACAGAGAGGAATGATA
CCCATTCCAACCAAATTACTGCGATGAATTCTTTCAAAACTTTTGGCGAT
CACTGCTTTAACTCCCAACAACATTGGACCCTTGGCAGCCCAATCACGGG
AACTTCCACTTCCATATTCAGCTCCAGCCAAGATAATTGTACCATGACCA
GCACTCTTGTATTTCATTGCTGCATCAAAAACAGAGAGTTTCTCCCCCTG
TTGGAACATGGACCGTCTTTGGACCCACTTCCCCATTCAAGAGCTTGTTA
ACAAGACGGATATTTGCAAAAGTTCCCTCTAGCCATCACTTCATCATTGC
CACGACGACTACCCTAAGAATTGAAGTCCCTGCGTTCCA
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