CN189046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL1_DICDI (Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36 Identity = 89/239 (37.24%), Postives = 133/239 (55.65%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ---KNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 S S ELLA F D +LKK N E +E+ L V+ + YI DKD+F +FY K LA+RL+ S ++D E +++ KLK CG ++TSK++ M TD++L+RE F ++ + + ID SV VL TG WP S++ ++P E+ C ++F+ FY+ + RKL W++ L + + K+ Q L STYQ LL FN + L+ EI L L L SL+ +K Sbjct: 407 SKSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFKYIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLSRELLDRFNNHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQNQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQESTQLIDSVLKGTLTSLAKSK 644
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL1_CAEEL (Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35 Identity = 76/232 (32.76%), Postives = 134/232 (57.76%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 + S+ELLA +CD +L+K + K+ DEA +EE K++ + YI DKD+F++FY K ++RL+ + SA+D+ E + +TKLK CG ++T+++ MV D ++++ F+E + + ++ +V VL++G WP++ ++ + LP ++ K +E+F FY K R+LTW+YS + I K +T Q T+LLFN D + +I + ++ SL Sbjct: 420 TKSAELLARYCDQLLRK--SSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKA-DMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSL 648
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL1_DROME (Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 9.745e-35 Identity = 88/259 (33.98%), Postives = 143/259 (55.21%), Query Frame = 1 Query: 7 ALKEAFEIFCNKPV-----GGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL--GQCNIN-GKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 AL +A F N V S S ELLA +CD +LKK D+ +E+ L +V+ + YI DKD+F ++Y K LA+RL+ SA+DD E +++KLKQ CG ++T K++ M D+ ++++ + F++YL+ +N ID + VL++G WP S++ LPSE+ + V F FY + RKL W+Y + G+ +N + L ST+Q + LL FN + ++ ++L+++L L AK Sbjct: 394 ALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNP-EDKELEDNLNQVMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRMFQDIGVSKDLNSYFKQYLA-EKNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQFNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQLQDNTQTQQENLIQVLQILLKAK 650
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL1_SCHPO (Cullin-1 OS=Schizosaccharomyces pombe GN=cul1 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 92/260 (35.38%), Postives = 145/260 (55.77%), Query Frame = 1 Query: 4 EALKEAFEIFCNKPV----GGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE-QKNIELI--VSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 ++L AF N+ V S S ELLA + D+IL+K N+ + + +E+ L ++ + Y+ DKD+F FY K LA+RL+ S + D E S+L+KLK+ CG ++TSK++ M D++L++E +F + Q+ ID S VL T FWP S + + +LP E+V E F+ +Y + RKL+W++ L + I + Q N+ + VSTYQ LLL+N D +Y E+ L+ D L +L+ AK Sbjct: 390 KSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKS-NKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQL---PQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIFLKAK 645
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL4_CAEEL (Cullin-4 OS=Caenorhabditis elegans GN=cul-4 PE=1 SV=3) HSP 1 Score: 136.732 bits (343), Expect = 1.317e-31 Identity = 75/246 (30.49%), Postives = 130/246 (52.85%), Query Frame = 1 Query: 4 EALKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLS--NNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQK-NIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 732 + L +AFE F NK V S+EL++ +L D +++ +++ + L Y+ KD+F +Y++ LA+RL +RSA+ D E+ +L KLK +CG FT K+EGM D+ + F +YL N + A + + V+T +WP+Y + ++N+P EM + ++ FY + +R + W + L I+ F ELI + YQ LLLFN + + +EI+ + ++V+ Sbjct: 458 QCLSDAFESFVNKQV--DRSAELISKHFHTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEHMNKEKA----NFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVK 697
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL3_CAEEL (Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.720e-31 Identity = 90/273 (32.97%), Postives = 140/273 (51.28%), Query Frame = 1 Query: 22 FEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF------EQKNIE---------------------LIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 FE F N S E +A + D++L+ G + +SD ++ L+ V+ L Y+ +KD+F +++++ LA+RLL D+S +DD E+++L KLK +CG QFT K+E M D L TSF ++ Q ID+S+ VLT G WP+ + + + LP E+ E+F +Y K RKLT LG ++ F N E L V+T+Q LL FN +R+S ++M +L + +L R L SL+ K Sbjct: 380 FETFLNS---NRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDNVMILFRYLQEKDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLATSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKILQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGK 647
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL2_CAEEL (Cullin-2 OS=Caenorhabditis elegans GN=cul-2 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 2.103e-29 Identity = 78/269 (29.00%), Postives = 138/269 (51.30%), Query Frame = 1 Query: 1 AEALKEAFEIFCNKPVGGSS---SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVT---VLTTGFWP--------------SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 747 + L +A + N G S +SE LA + D +LKK + LS+ +E L+ + + YI DKD+F +FY K LA RL+ S + D E ++ KLKQ CG +FTSK+ M TD+ L++E +F++++++ + P + T +L G WP + ++ +LP + ++ F+ FY K RKLTW++++ Q ++ + K + YQ A LL F D + +I ++ ++ D L++ + ++ Sbjct: 381 SSGLDKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIEDKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQELSNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWPLNAPQLSTNSNNQTAQDVANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIGEEIGVSGDYLLKTIRTI 648
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL6_CAEEL (Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28 Identity = 73/230 (31.74%), Postives = 119/230 (51.74%), Query Frame = 1 Query: 61 SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 750 S++ LA +CD +LKK N K+ DE L+K + +L YIS+KD+F +Y+ + R++ + SA+DD E +T L G ++T + MV D ++++ T F++ + ID +V + TTG WPS + LP E+ ++ F FY R+L W YS + +N K +K IV+ Q TL LFN D + +I + +T ++ SL+ Sbjct: 378 SADYLARYCDQLLKK--NSKVQDET---ALDKALTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVKMVEDAKISKDLTTEFKDIKTEKS-----IDFNVILQTTGAWPSLDQIKIILPRELSTILKEFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTIEQISKAIEMTAKSTSAIVGSLN 597
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL5_DICDI (Cullin-5 OS=Dictyostelium discoideum GN=culE PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 74/237 (31.22%), Postives = 131/237 (55.27%), Query Frame = 1 Query: 7 ALKEAFEIFCNKPVGG-------SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP---SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNI-ELIVSTYQAATLLLFNTSDRLS 681 A+ ++F I N+ S+ +L+ FCD IL+KG + +SDEA +E+ L + V L Y+ DKD+F Y+K L++RL+ D SA++D E ++ KLK G + +K+ M+TD+ L ++ +F+ +L+ P + VLT G W ++ PSEM+ + F+ FY+ + R LT++Y + +++ + + I +L + YQ A LL+FN +D+++ Sbjct: 358 AMDKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKGPHH-ISDEAELEKKLTEAVCLFKYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMITDMRLCKDININFQNHLNEKSLTLP-YQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSITYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKIT 592
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL3_YEAST (Cullin-3 OS=Saccharomyces cerevisiae GN=CUL3 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.941e-23 Identity = 73/251 (29.08%), Postives = 130/251 (51.79%), Query Frame = 1 Query: 10 LKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLN----LPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 750 L + F ++ +K G+ SE L+T+ D+ +K+ + I++ L KL+ +++KD+F + Y+K+L+RRLL RS + E+ ++ +K+ G FTSK+E M+ D++L+ E +F+ + N+ + + VLT WP ++ ++ LP M + + F+G+Y K K R L W + L I +F E+ S Y LLF + L+ EI ++ DD+ L+ S+S Sbjct: 369 LGDVFSMYFSKE--GALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIGLLTEKDIFEKIYKKQLSRRLLQQRSLVEI-EKWMVQMIKKVLGTFFTSKLEIMLRDISLSSEMYQAFQH---STINSIEYLSFAPQVLTRTSWPFQSTNPIDEGISLPPRMSQILAGFEGYYSLKYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYELTHIPIDDVKSLVMSMS 613 The following BLAST results are available for this feature:
BLAST of CN189046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189046 ID=CN189046; Name=CN189046; organism=Citrus sinensis; type=EST; length=762bpback to top |